NEBNext^® LV Unique Dual Index Primers Set 2A

The following reagents are supplied with this product:

NEB #	Component Name	Component #	Stored at (°C)	Amount	Concentration
E3390S     -20       NEBNext® LV Unique Dual Index Primers Set 2A E3390AVIAL -20 1 x 5 μl/well 10 µM

Companion Products

• NEBNext^® Enzymatic 5hmC-seq Kit
• NEBNext^® Enzymatic Methyl-seq v2 Kit
• NEBNext^® Enzymatic Methyl-seq v2 Conversion Module
• NEBNext^® Magnetic Separation Rack

1. Where can I find protocols for use of the NEBNext® LV Unique Dual Index Primers Set 2A, including index pooling guidelines? (NEB #E3390)

• E3390 Forward Strand Workflow Sample Sheet
• E3390 Reverse Complement Workflow Sample Sheet
• NEB E3390 LV UDI IlluminaLRM

• NEBNext® Multiplex Oligos Selection Chart

1. What is the difference between NEBNext® Primers for Epigenetics and NEBNext LV Unique Dual Index Primers?
2. Are Sample Sheets available for use with the NEBNext® LV Unique Dual Index Primers Sets 1-5?
3. Are libraries that have been dual indexed using the NEBNext® LV Unique Dual Index Primers compatible with single-end sequencing?
4. How many primer pairs are available in the NEBNext® LV Unique Dual Index Primer Pairs Sets 1-5?
5. Can the NEBNext® LV Unique Dual Index Primers be used to address “index hopping” with Illumina® patterned flow cells?
6. Are the NEBNext® LV Unique Dual Index Primers the same as NEBNext Multiplex Oligos for Illumina®?
7. Are the NEBNext® LV Unique Dual Index Primers validated for the EM-seq™ v2 or E5hmC-seq™ workflows?
8. What is the concentration of the Index Primers in NEBNext® LV Unique Dual Index Primers?
9. How many reactions’ worth of primer are in each well of the NEBNext® LV Unique Dual Index Primers?
10. Can I use the 96-well primer plate supplied with the NEBNext LV Unique Dual Index Primers to do my PCR reactions?
11. Do I need to spike in custom sequencing primers when sequencing libraries made with NEBNext® LV Unique Dual Index Primers on Illumina® sequencing instruments?
12. Can I perform single read runs and still get both index sequences? Can I run both single read and paired-end recipes with dual-indexed libraries?
13. What sequences need to be trimmed for NEBNext libraries that are sequenced on an Illumina instrument?
14. What do I do if I received an index collision/barcode collision error?

Quality Control tests are performed on each new lot of NEB product to meet the specifications designated for it. Specifications and individual lot data from the tests that are performed for this particular product can be found and downloaded on the Product Specification Sheet, Certificate of Analysis, data card or product manual. Further information regarding NEB product quality can be found here.

The Specification sheet is a document that includes the storage temperature, shelf life and the specifications designated for the product. The following file naming structure is used to name these document files: [Product Number]_[Size]_[Version]

• E3400S_v1
• E3390S_v1

The Certificate of Analysis (COA) is a signed document that includes the storage temperature, expiration date and quality controls for an individual lot. The following file naming structure is used to name these document files: [Product Number]_[Size]_[Version]_[Lot Number]

• E3390S_v1_10271788
• E3390S_v1_10280161
• E3390S_v1_10266793
• E3390S_v1_10292902
• E3390S_v1_10282547
• E3390S_v1_10309181
• E3390S_v1_10300587
• E3390S_v1_10312077
• E3390S_v1_10325053
• E3390S_v1_10316046
• E3390S_v1_10324903

The following is a list of Safety Data Sheet (SDS) that apply to this product to help you use it safely.

• NEBNext^® LV Unique Dual Index Primers Set 2A

Products and content are covered by one or more patents, trademarks and/or copyrights owned or controlled by New England Biolabs, Inc (NEB). The use of trademark symbols does not necessarily indicate that the name is trademarked in the country where it is being read; it indicates where the content was originally developed. The use of this product may require the buyer to obtain additional third-party intellectual property rights for certain applications. For more information, please email busdev@neb.com.

This product is intended for research purposes only. This product is not intended to be used for therapeutic or diagnostic purposes in humans or animals.

New England Biolabs (NEB) is committed to practicing ethical science – we believe it is our job as researchers to ask the important questions that when answered will help preserve our quality of life and the world that we live in. However, this research should always be done in safe and ethical manner. Learn more.