Improvements in library quality and variant calling accuracy of NEBNext UltraShear® and NEBNext UltraShear FFPE DNA Library Prep to FFPE Samples in a hybrid capture workflow.
Novel solution for enzymatic fragmentation for long-read sequencing.
Application and performance recommendations of NEBNext UltraExpress DNA and RNA for low-input samples.
Novel single-day ligation-based small RNA library preparation method demonstrates reduced bias, enhanced sensitivity, and accuracy of sncRNA detection.
NEBNext® Enzymatic Methyl-seq generates consistent and accurate methylation calls using various sample types across a wide range of inputs. The use of base conversion in EM-seq™ poses a challenge to variant detection, however, this can be resolved bioinformatically because methylation information is preserved on only one strand in EM-seq libraries, while the other strand can be used to detect genetic variation. Here we present a bioinformatic workflow that demonstrates the ability to call germline SNPs with high recall and precision. With this ability to assess methylation state and genetic mutations from a single library we can maximize the utility of our sequencing datasets.
Fragmented or low-quality DNA, including FFPE DNA, can be challenging to analyze for epigenetic marks, but new techniques demonstrate reliably high-quality methyl-sequencing profiles. Enzymatic fragmentation, when used upstream of enzymatic methylation mapping, improves library data quality metrics as compared to mechanical shearing with Covaris.
Population-level pathogen surveillance of wastewater can identify disease outbreaks early. In this poster, we present a workflow for detecting the example pathogens, influenza A (flu A) and respiratory syncytial virus (RSV), with NEBNext library prep in concert with Nanotrap Microbiome A and B particles.
In this poster, we demonstrate a faster, single-day workflow for NEBNext Enzymatic Methyl-seq v2 and NEBNext Enzymatic 5hmC-seq, featuring a reduced deamination time.
This poster demonstrates the successful use of Monarch Mag Cell-free DNA for cfDNA extraction from liquid biopsy samples, leading to high-quality DNA library prep using a modified NEBNext Ultra II DNA library extraction protocol.
Automation of NGS library prep, enabled by robotic liquid handlers, meets the needs of NGS across a variety of utilities including basic research, drug discovery, and human Health. New England Biolabs and NEBNext® NGS solutions are designed with automation in mind by addressing several factors including fewer workflow components, streamlined workflows, reduction in bead cleanups, novel enzymatic solutions, and generous overages to support automation dead-volumes.
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