FAQ: Do detergents inhibit exoglycosidases/endoglycosidases?
Endo D is also inhibited by SDS, however NP-40 does not counteract this inhibition.
Finally, common stabilizing reagents such as Tween, Triton X-100, NP-40, octyl glucoside and non-detergent sulfobetaines, as well as traces of organic solvents, can prevent optimal rapid deglycosylation by Rapid PNGase F.