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    YearTitleJournalAuthorsApplication(s)
    2006Expression of N-terminal Cys-protein fragments using an intein refolding strategyBioorg. Med. Chem.Hackenberger, C. P., et. al.
    2009Site-specific covalent labeling of proteins inside live cells using small molecule probesBioorg. Med. Chem.Chattopadhaya, S., et al.
    2005Site-specific immobilization of proteins in a microarray using intein-mediated protein splicingBioorg. Med. Chem. Lett.Girish, A., et al.
    2004Synthesis and characterization of bifunctional probes for the specific labeling of fusion proteinsBioorg. Med. Chem. Lett. Kindermann M. et al.
    2004Site-specific conjugation of oligonucleotides to the C-terminus of recombinant protein by expressed protein ligationBioorg. Med. Chem. Lett.Takeda, S.,et al.
    2012Oxidative folding of proteins in Escherichia coliBioPharm InternationalBerkmen, M.
    2008Optical lock-in detection of FRET using synthetic and genetically encoded optical switchesBiophys. J. Mao S. et al.
    2010Triplet imaging of oxygen consumption during the contraction of a single smooth muscle cellBiophys. J. Geissbuehler M. et al.
    2010Stimulated emission depletion nanoscopy of living cells using SNAP-Tag fusion proteinsBiophys. J.  Hein B. et al.
    2008An amalgamation of solid phase peptide synthesis and ribosomal peptide synthesisBiopolymersOttesen, J. et al.
    1999Intein-Mediated Protein Ligation: Harnessing Nature's Escape Artists.Biopolymers Evans, T.C.and Xu, M-Q
    2012Oxidative folding of proteins in Escherichia coliBioProcess InternationalBerkmen, M.
    2016Using glycosidases to remove, trim, or modify glycans on therapeutic proteinsPublication.BioProcess InternationalGuthrie, E.P., Magneilli, P.E.
    2010Optimizing Clarification and Concentration Steps Using an Automated Process System and Design of Experiments (DoE).BioProcessing Journal Bowen, T.L., Blake, C., Cohen, D.R.and Walsh, K.
    2016<a href="http://biorxiv.org/content/early/2016/04/04/047142" target="_blank">Detecting DNA Methylation using the Oxford Nanopore Technologies MinION sequencer</a>bioRxivSimpson, J.T. et al.
    2004cDNA cloning and characterization of a secreted luciferase from the luminous Japanese ostracod, Cypridina noctilucaBiosci. Biotechnol. Biochem.Nakajima, Y., Kobayashi, K., Yamagashi, K., Enomoto, T., Ohmiya, Y.
    2007 High-Level Heterologous Expression of Bacillus halodurans Putative Xylanase Xyn11A (BH0899) in Kluyveromyces lactisBiosci. Biotechnol. Biochem.Wamalwa, B.M., et al.
    2004 cDNA cloning and characterization of a secreted luciferase from the luminous Japanese ostracod, Cypridinanoctiluca Biosci. Biotechnol. Biochem. Nakajima, Y., Kobayashi, K., Yamagishi, K., Enomoto, T. and Ohmiya, Y.
    1994An amazing distortion in DNA induced by a methyltransferase (Nobel lecture)Bioscience Reports Roberts, R.J.
    2007Determination of silencing potency of synthetic and RNase Ill-generated siRNA using a secreted luciferase assay.BiotechniquesMorlighem, J.E., Petit, C and Tzertzinis, G.
    2007Dual-reporter assay using two secreted luciferase genesBiotechniquesWu, C., Suzuki-Ogoh, C., Ohmiya, Y.
    2007Use of intein-mediated phosphoprotein arrays to study substrate specificity of protein phosphatasesBiotechniquesKochinyan, S., et al.
    2012Simultaneous multiple target detection in real-time loop-mediated isothermal amplificationBiotechniquesTanner, N.A., Zhang, Y. and Evans, T.C. Jr.
    2012Simultaneous multiple target detection in real-time loop-mediated isothermal amplificationBiotechniquesTanner NA, Zhang Y, Evans TC Jr.
    2013Fast mitochondrial DNA isolation from mammalian cells for next-generation sequencingBiotechniquesWilber Quispe-Tintaya, Ryan R White, Vasily N Popov, Jan Vijg, Alexander Y Maslov
    2015Visual detection of isothermal nucleic acid amplification using pH-sensitive dyesBiotechniquesTanner, N.A., Zhang, Y. and Evans, T.C., Jr.
    2015Visual detection of isothermal nucleic acid amplification using pH-sensitive dyes.BiotechniquesTanner NA, Zhang Y, Evans TC Jr
    2015CRISPR/Cas9 nuclease cleavage combined with Gibson assembly for seamless cloningBiotechniquesWang JW, Wang A, Li K, Wang B, Jin S, Reiser M, Lockey RF
    1984DNA modification methylases: New uses in the manipulation of DNA.BioTechniquesChrist, C., and Nelson, M.
    1986Sequencing in the Fast Lane: A Rapid Protocol for [a-35S] dATP Dideoxy DNA Sequencing.BioTechniquesWilliams, S.A., Slatko, B.E., Moran, L.S., and DeSimone, S.M.
    1987The Use of DNA Sequencing Reactions as Probes for Southern Blots, Dot Blots and Colony Hydridizations.BioTechniquesCard, C.O., Williams, S.A., Moran, L.S., Poole, C.B., and Slatko, B.E.
    1991Application of a novel chemiluminescence-based DNA detection method to single-vector and multiplex DNA sequencing.BioTechniquesCreasey, A., D'Angio, L., Dunne, T.S., Kissinger, C., O'Keefe, T., Perry-O'Keefe, H., Moran, L.S., Roskey, M., Schildkraut, I.and Sears, L.E.
    1992CircumVent» Thermal Cycle Sequencing and Alternative Manual and Automated DNA Sequencing Protocols Using the Highly Thermostable VentR» (exo-) DNA Polymerase.BioTechniquesSears, L.E., Moran, L.S., Kissinger, C., Creasey, T., Perry-O'Keefe, H., Roskey, M., Sutherland, E., and Slatko, B.E.
    1993Protecting Recognition Sequences on DNA by a Cleavage-Deficient Restriction Endonuclease.BioTechniquesXu, S., and Schildkraut, I.
    1994Construction of pSC101 derivatives with Camr and Tetr for selection or LacZ' for blue/white screening.BioTechniquesXu, S.Y., and Fomenkov, A.
    1995LITMUS: Multipurpose cloning vectors with a novel system for bidirectional in vitro transcription.BioTechniquesEvans, P.D., Cook, S.N., Riggs, P.D., and Noren, C.J.
    1995Minimum duplex requirements for restriction enzyme cleavage near the termini of linear DNA fragments.BioTechniquesMoreira, R.F., and Noren, C.J.
    1999Chemiluminescent Detection of Sequential DNA Hybridizations to High-Density, Filter-Arrayed cDNA Libraries: A Subtraction Method for Novel Gene Discovery.BioTechniquesGuiliano, D., Ganatra, M., Ware, J., Parrot, J., Daub, J., Moran, L., Brennecke, H., Foster, J.M., Supali, T., Blaxter, M., Scott, A.L., Williams, S.A.and Slatko, B.E.
    1999Thermal Asymmetric Interlaced PCR Amplification of YAC Insert End Fragments for Chromosome Walking in Plasmodium falciparum and Other A/T-Rich Genomes.BioTechniquesFoster, J.M., Christodoulou, Z., Cowan, G.M.and Newbold, C.I.
    2001Hybridization of High-Denisty Filter Arrays of a Brugia malayi BAC Library with Biotinylated Oligonucleotides and PCR Products.BioTechniquesFoster, J.M., Kamal, I.H., Daub, J., Swan, M.C., Ingram, J.R., Ganatra, M., Ware, J., Guiliano, D., Aboobaker, A., Moran, L., Blaxter, M.and Slatko, B.E.
    2001Purification of proteins fused to either the amino or carboxy terminus of the Mycobacterium xenopi gyrase A intein.BioTechniquesSouthworth, M.W., Amaya, K., Evans, T.C., Xu, M-Q and Perler, F.B.
    2004Producing peptide arrays for epitope mapping by intein-mediated protein ligation.BioTechniquesSun, L., Rush, J., Ghosh, I., Maunus, J.R.and Xu, M.Q.
    2004Western blot analysis of Src kinase assays using peptide substrates ligated to a carrier protein.BioTechniquesXu, J., Sun, L., Ghosh, I.and Xu, M.-Q.
    2007Determination of silencing potency of synthetic and RNase III-generated siRNA using a secreted luciferase assay.BioTechniquesMorlighem, J-E., Petit, C.and Tzertzinis, G.
    2007Use of intein-mediated phosphoprotein arrays to study substrate specificity of protein phosphatases.BioTechniquesKochinyan, S., Sun.L., Ghosh, I., Barshevsky, T., Xu, J.and Xu, M.Q.
    2008Kits and their unique role in molecular biology: a brief retrospective.BioTechniquesWeiner, M.and Slatko, B.
    2009Educational Outreach - Discover the Microbes Within!BioTechniquesWeiner, M.P.and Slatko, B.(eds.)
    2009Educational Outreach - Give Students a Taste for Molecular Biology and Tasting PTC: A New Lab with an Old Flavor.BioTechniquesWeiner, M.P.and Slatko, B.(eds.)
    2010Protein mediated miRNA detection and siRNA enichment using p19.BioTechniquesJin, J., Cid, M., Poole, C.B.and McReynolds, L.A.
    2007Determination of silencing potency of synthetic and RNase III-generated siRNA using a secreted luciferase assay Biotechniques Morlighem, J.E., Petit, C. and Tzertzinis, G.
    2009Optimization of 454 sequencing library preparation from small amounts of DNA permits sequence determination of both DNA strandsBiotechniques Maricic, T. and Pääbo, S.
    2005SNAP-tag mediated live cell labeling as an alternative to GFP in anaerobic organismsBioTechniques Regoes A. et al.
    2006Fluorophores for live cell imaging of AGT fusion proteins across the visible spectrumBioTechniques Keppler A. et al.
    2010 Covalent quantum dot receptor linkage via the acyl carrier protein for single-molecule tracking, internalization, and trafficking studiesBioTechniques Zelman-Femiak, M. et al.
    2004Soluble expression and affinity purification of functional domain of human acetylcholine receptor alpha-subunit by the modulation of maltose binding protein.Biotechnol Lett.Li, Z.Y., Li, Y.J., Guo, C.Y., Shi, Y.W., Xu, M-Q., Trommer, W.E.and Yuan, J.M.
    2005Development of a minimal cell-free translation system for the synthesis of presecretory and integral membrance proteinsBiotechnol, Prog.Kuruma, Y., Nishiyama, K., Shimizu, Y., Muller, M and Ueda, T.
    2008Glycoengineering of the methylotrophic yeast Hansenula polymorpha for the production of glycoproteins with trimannosyl core N-glycan by blocking core oligosaccharide assembly Biotechnol. J. Oh, D.B., Park, J.S., Kim, M.W., Cheon, S.A., Kim, E.J., Moon, H.Y., Kwon, O., Rhee, S.K., Kang, H.A.
    2003Study of protein splicing and intein-mediated peptide bond cleavage under high-cell-density conditions.Biotechnol.Prog.Sharma, S., Zhang, A., Wang, H., Harcum, S.W.and Chong S.
    1995Extremozymes: expanding the limits of biocatalysis.BiotechnologyAdams, M.W.W., Perler, F.B.and Kelly, R.M.
    2011Tuned Escherichia coli as a host for the expression of disulfide-rich proteinsBiotechnology JournalSalinas, G., Pellizza, L., Margenat, M., et al.
    2011Tuning different expression parameters to achieve soluble recombinant proteins in E. coli: Advantages of high-throughput screeningBiotechnology JournalCorrea, A. and Oppezzo, P.
    2005Characterization of Two New Aminopeptidases in Escherichia coli.BMC BioinformaticsZheng, Y., Roberts, R.J., Kasif, S.and Guan, C.
    2005Phylogenetic detection of conserved gene clusters in microbial genomes.BMC Bioinformatics Zheng, Y., Anton, B.P., Roberts, R.J.and Kasif, S.
    2008A comparative study of protein synthesis in in vitro systems: from the prokaryotic reconstituted to the eukaryotic extract-based.BMC Biotechnol.Hillebrecht, J.R.and Chong, S.
    2011T4 RNA ligase 2 truncated active site mutants: improved tools for RNA analysis.BMC Biotechnol.Viollet, S., Fuchs, R.T., Munafo, D.B., Zhuang, F.and Robb, G.B.
    2010Controlled expression of functional miR-122 with a ligand inducible expression system.BMC Biotechnology Shea, C.and Tzertzinis, G.
    2007Diversifying selection and host adaptation in two endosymbiont genomes.BMC Evolutionary BiologyBrownlie, J.C., Adamski, M., Slatko, B.and McGraw, E.A.
    2013High-throughput sequencing of methylated cytosine enriched by modification-dependent restriction endonuclease MspJIBMC GeneticsXiaojun Huang, Hanlin Lu, Jun-Wen Wang, Liqin Xu, Siyang Liu, Jihua Sun, Jun Wang, Fei Gao
    2013Characterization of human plasma-derived exosomal RNAs by deep sequencingBMC GenomicsHuang, X. et al.
    2014Concurrent transcriptional profiling of Dirofilaria immitis and its Wolbachia endosymbiont throughout the nematode life cycle reveals coordinated gene expressionBMC GenomicsLuck, A.N., Evans, C.C., Foster, J.M., et al.
    2015The complete methylome of Helicobacter pylori UM032BMC GenomicsLee, W.C., Anton, B.P., Wang, S., Baybayan, P., Singh, S., Ashby, M., Chua, E.G., Tay, C.Y., Thirriot, f., Loke, M.F., Goh, K.L., Marshall, B.J., Robert, R.J. and Vadivelu, J.
    2015Tissue-specific transcriptomics and proteomics of a filarial nematode and its Wolbachia endosymbiontBMC GenomicsLuck, A.N., Anderson, K.G., McClung, C.M., VerBerkmoes, N.C., Foster, J.M., Michalski, M.L. and Slatko, B.E. NEBNext® Sample Preparation for Next Generation Sequencing
    2016A novel enrichment strategy reveals unprecedented number of novel transcription start sites at single base resolution in a model prokaryote and the gut microbiome.BMC GenomicsEttwiller, L., Buswell, J., Yigit, E. and Schildkraut, I
    2014PCR amplification of a triple-repeat genetic target directly from whole blood in 15 minutes as a proof-of-principle PCR study for direct sample analysis for a clinically relevant targetBMC Med GenetConnelly CM1, Porter LR2, TerMaat JR
    2014DevR (DosR) mimetic peptides impair transcriptional regulation and survival of Mycobacterium tuberculosis under hypoxia by inhibiting the autokinase activity of DevS sensor kinaseBMC MicrobiolKaur K, Taneja NK, Dhingra S, Tyagi JSPhage Display
    2006A genetic dissection of the LlaJI restriction cassette reveals insights on a novel bacteriophage resistance system.BMC Microbiol.O'Driscoll, J., Heiter, D.F., Wilson, G.G., Fitzgerald, G.F., Roberts, R.and van Sinderen, D.
    2009Computational Prediction of Essential Genes in an Unculturable Endosymbiotic Bacterium, Wolbachia of Brugia malayi.BMC Microbiol.Holman, A.G., Davis, P.J., Foster, J.M., Carlow, C.K.S.and Kumar, S.
    2012Structure-function analysis of Methanobacterium thermoautotrophicum RNA ligase - engineering a thermostable ATP independent enzymeBMC Mol Biol.Zhelkovsky, A.M. and McReynolds, L.A.
    2008The BsaHI restriction-modification system: Cloning, sequencing and characterisation of DNA recognising motifs.BMC Molecular Biology Neely, R.K.and Roberts, R.J.
    2011Targeting choroid plexus epithelia and ventricular ependyma for drug delivery to the central nervous systemBMC NeurosciGonzalez, A.M. et al.Phage Display
    2010Cloning of NruI and Sbo13I restriction and modification sstems in E.coli and amino acid sequence comparison of M.NruI and M.Sbo13I with other amino-methyltransferases.BMC Res NotesZhu, Z., Pedamallu, C.S., Fomenkov, A., Benner, J.and Xu, S.Y.
    2011Intravesicle Isothermal DNA Replication.BMC Res NotesTorino, D., Del Bianco, C., Ross, L., Ong, J.and Mansy, S.
    2013Abortive TransductionBrenner's Encyclopedia of GeneticsRaleigh, E.A.
    2013Bacterial GenesBrenner's Encyclopedia of GeneticsRaleigh, E.A.
    2013ConjugationBrenner's Encyclopedia of GeneticsRaleigh, E.A. and Low, K.B.
    2013VectorsBrenner's Encyclopedia of GeneticsAnton, B.P.
    1994VISA: Visual Sequence Analysis for the comparison of multiple amino acid sequences.CABIOSPosfai, J., Szaraz, Z., and Roberts, R.J.
    1999KDR Activation in Astrocytic Neoplasms.CancerCarroll, R.S., Zhang, J., Bello, L., Melnick, M.B., Maruyama, T.and Black, P.M.
    2011Engineering a waste management enzyme to overcome cancer resistance to apoptosis: adding DNase1 to the anti-cancer toolbox Cancer Gene Ther. Rosner, K., Kasprzak, M.F., Horenstein, A.C., Thurston, H.L., Abrams, J., Kerwin, L.Y., Mehregan, D.A. and Mehregan, D.R.
    2015Proteomic Analysis Reveals Aberrant O-GlcNAcylation of Extracellular Proteins from Breast Cancer Cell SecretionCancer Genomics ProteomicsNetsirisawan P., Chokchaichamnankit D., Srisomsap C., Svasti J., Champattanachai V.
    20116-Thioguanine Reactivates Epigenetically Silenced Genes in Acute Lymphoblastic Leukemia Cells by Facilitating Proteasome-mediated Degradation of DNMT1Cancer Res.Yuan, B., Zhang, J., Wang, H., Xiong, L., Cai, Q., Wang, T., Jacobsen, S., Pradhan, S. andd Wang, Y.
    2012In vivo incorporation of an azide labeled sugar analog to detect mammalianCarbohydrate Res. Vainauskas, S., Cortes, L.K. and Taron, C.H.
    1980The Evolution of Genes: the Chicken Preproinsulin GeneCellPerler, F.B.and Efstratiadis, A.
    1993Crystal structure of the HhaI DNA methyltransferase complexed with S-adenosyl-L-methionine.CellCheng, X., Kumar, S., Posfai, J., Pflugrath, J.W., and Roberts, R.J.
    1994Hhal Methyltransferase Flips its Target Base Out of the DNA Helix.CellKlimasauskas, S., Kumar, S., Roberts, R.J., and Cheng, X.
    1995On base flipping.CellRoberts, R.J.
    1998Protein Splicing of inteins and hedgehog autoproteolysis: structure, function and evolution.CellPerler, F.B.
    1999Structural Insights into the Mechanism of Intramolecular Proteolysis.CellXu, M.Q., Buckley, D., Guan, C.and Guo, H-C
    2012Dual binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants.CellXuehua Zhong, X., Du, J., Bernatavichute, Y.V., Stroud, H., Feng, S., Caro, E., Vashisht, A.A., Chin, H.G., Terragni, J., Tu, A., Hetzel, J., Wohlschlegel, J.A., Pradhan, S., Patel, D.J. and Jacobsen, S.E.
    2013Ribosome profiling provides evidence that large noncoding RNAs do not encode proteinsCellGuttman M, Russell P, Ingolia NT, Weissman JS, Lander ES