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    YearTitleJournalAuthorsApplication(s)
    2015A metagenomics and case-control study to identify viruses associated with bovine respiratory disease.J VirolTerry Fei Fan Ng, Nikola O Kondov, Xutao Deng, Alison Van Eenennaam, Holly L Neibergs, Eric DelwartcDNA Synthesis
    2015Activation and enhancement of Fredericamycin A production in deepsea-derived Streptomyces somaliensis SCSIO ZH66 by using ribosome engineering and response surface methodology.Microb Cell FactYonghe Zhang, Huiming Huang, Shanshan Xu, Bo Wang, Jianhua Ju, Huarong Tan, Wenli LiHigh-Fidelity PCR
    2015Alternative 3' UTRs act as scaffolds to regulate membrane protein localization.NatureBinyamin D Berkovits, Christine MayrHigh-Fidelity PCR
    2015An alternative pluripotent state confers interspecies chimaeric competency.NatureJun Wu, Daiji Okamura, Mo Li, Keiichiro Suzuki, Chongyuan Luo, Li Ma, Yupeng He, Zhongwei Li, Chris Benner, Isao Tamura, Marie N Krause, Joseph R Nery, Tingting Du, Zhuzhu Zhang, Tomoaki Hishida, Yuta Takahashi, Emi Aizawa, Na Young Kim, Jeronimo Lajara, Pedro Guillen, Josep M Campistol, Concepcion Rodriguez Esteban, Pablo J Ross, Alan Saghatelian, Bing Ren, Joseph R Ecker, Juan Carlos Izpisua BelmonteHigh-Fidelity PCR
    2015An IL-27/NFIL3 signalling axis drives Tim-3 and IL-10 expression and T-cell dysfunctionNat Commun Zhu, C., Sakuishi, K., Xiao, S., Sun, Z., Zaghouani, S., Gu, G., Wang, C., Tan, D.J., Wu, C., Rangachari, M., Pertel, T., Jin, H.T., Ahmed, R., Anderson, A.C., Kuchroo, V.K.
    2015Biochemical characterization of a Naegleria TET-like oxygenase and its application in single molecule sequencing of 5-methylcytosineProc Natl Acad Sci USAPais, J.E., Dai, N., Tamanaha, E., Vaisvila, R., Fomenkov, A.I., Bitinaite, J., Sun, Z., Guan, S., Correa, I.R. Jr., Noren, C.J., Cheng, X., Roberts, R.J., Zheng, Y. and Saleh, L.
    2015Bovine embryo sex determination by multiplex loop-mediated isothermal amplification.TheriogenologyTrisadee Khamlor, Petai Pongpiachan, Rangsun Parnpai, Kanchana Punyawai, Siwat Sangsritavong, Nipa ChokesajjawateeIsothermal Amplification
    2015Clinical Evaluation of a Loop-Mediated Isothermal Amplification (LAMP) Assay for Rapid Detection of Neisseria meningitidis in Cerebrospinal Fluid.PLoS OneDoKyung Lee, Eun Jin Kim, Paul E Kilgore, Soon Ae Kim, Hideyuki Takahashi, Makoto Ohnishi, Dang Duc Anh, Bai Qing Dong, Jung Soo Kim, Jun Tomono, Shigehiko Miyamoto, Tsugunori Notomi, Dong Wook Kim, Mitsuko SekiIsothermal Amplification
    2015Comparison of loop-mediated isothermal amplification and real-time PCR for detecting Bordetella pertussis.J Med MicrobiolMohammad Reza Allahyar Torkaman, Kazunari Kamachi, Vajihe Sadat Nikbin, Masoumeh Nakhost Lotfi, Fereshteh ShahcheraghiIsothermal Amplification
    2015Complete genome sequence and methylome analysis of bacillus strain x1Genome AnnouncFomenkov, A., Lunnen, K.D., Zhu, Z., Anton, B.P., Wilson, G.G., Vincze, T. and Roberts, R.J.
    2015Complete Genome Sequence of ER2796, a DNA Methyltransferase-Deficient Strain of Escherichia coli K-12PLoS OneAnton, B.P., Mongodin, E.F., Agrawal, S., Fomenkov, A., Byrd, D.R., Roberts, R.J. and Raleigh, E.A.
    2015Considerations and protocols for the synthesis of custom protein labeling probesMetholds Mol BiolCorrea, I.R. Jr.
    2015Development of a Rapid, Simple Method for Detecting Naegleria fowleri Visually in Water Samples by Loop-Mediated Isothermal Amplification (LAMP).PLoS OneAongart Mahittikorn, Hirotake Mori, Supaluk Popruk, Amonrattana Roobthaisong, Chantira Sutthikornchai, Khuanchai Koompapong, Sukhontha Siri, Yaowalark Sukthana, Duangporn NacapunchaiIsothermal Amplification
    2015Developmental exposure to 2,3,7,8-tetrachlorodibenzo-p-dioxin alters DNA methyltransferase (dnmt) expression in zebrafish (Danio rerio)Toxicol Appl PharmacolAluru N, Kuo E, Helfrich LW, Karchner SI, Linney EA, Pais JE, Franks DG
    2015Functional analysis of microRNA activity in Brugia malayiInt J ParasitolLiu, C., Voronin, D., Poole, C.B., Bachu, S., Rogers, M.B., Jin, J., Ghedin, E., Lustigman, S., McReynolds, L.A. and Unnasch, T.R.
    2015Functional Characterization of Cucurbitadienol Synthase and Triterpene Glycosyltransferase Involved in Biosynthesis of Mogrosides from Siraitia grosvenorii.Plant Cell PhysiolLonghai Dai, Can Liu, Yueming Zhu, Jiangsheng Zhang, Yan Men, Zeng Yan, Yuanxia SunHigh-Fidelity PCR
    2015Genetically encoded fragment-based discovery of glycopeptide ligands for carbohydrate-binding proteinsJ Am Chem SocNg, S., Lin, E., Kitov, P.I., Tjhung, K.F., Gerlits, O.O., Deng, L., Kasper, B., Sood, A., Paschal, B.M., Zhang, P., Ling, C.C., Klassen, J.S., Noren, C.J., Mahal, L.K., Woods, R.J., Coates, L. and Derda, R.
    2015Genome-Wide Methylation Patterns in Salmonella enterica Subsp. enterica SerovarsPLoS OnePirone-Davies, C., Hoffmann, M., Roberts, R.J., Muruvanda, T., Timme, R.E., Strain, E., Luo, Y., Payne, J., Luong, K., Song, Y., Tsai, Y.C., Boitano, M., Clark, T.A., Korlach, J., Evans, P.S., Allard, M.W.
    2015Iron-induced Local Complement Component 3 (C3) Up-regulation via Non-canonical Transforming Growth Factor (TGF)-β Signaling in the Retinal Pigment Epithelium.J Biol ChemYafeng Li, Delu Song, Ying Song, Liangliang Zhao, Natalie Wolkow, John W Tobias, Wenchao Song, Joshua L DunaiefHigh-Fidelity PCR, Site Directed Mutagenesis
    2015microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach.Parasites & VectorsMacchiaroli, N. et al.
    2015Multivalent site-specific phage modification enhances the binding affinity of receptor ligandsBioconjug ChemBeech, J., Saleh, L., Frentzel, J., Figler, H., Correa, I.R. Jr., Baker, B., Ramspacher, C., Marshall, M., Dasa, S., Linden, J., Noren, C.J. and Kelly, K.A.
    2015Phylogeny and differentiation of reptilian and amphibian ranaviruses detected in europePLoS OneStöhr AC, López-Bueno A, Blahak S, Caeiro MF, Rosa GM, Alves de Matos AP, Martel A, Alejo A, Marschang RE
    2015Probing the Run-On Oligomer of Activated SgrAI Bound to DNAPLoS OneShah, S., Sanchez, J., Stewart, A., et al.Cloning & Synthetic Biology, DNA Preparation, Restriction Enzyme Digestion
    2015Rapid detection of equine coronavirus by reverse transcription loop-mediated isothermal amplification.J Virol MethodsManabu Nemoto, Yoshinori Morita, Hidekazu Niwa, Hiroshi Bannai, Koji Tsujimura, Takashi Yamanaka, Takashi KondoIsothermal Amplification
    2015Rapid Preparation of Released N-Glycans for HILIC Analysis Using a Labeling Reagent that Facilitates Sensitive Fluorescence and ESI-MS DetectionAnal ChemLauber, M.A., Yu, Y.Q., Brousmiche,D.W., Hua, Z., Koza, S.M., Magnelli, P., Guthrie, E., Taron, C.H. and Fountain, K.J.
    2015Rational design of 'controller cells' to manipulate protein and phenotype expression.Metab EngAmin Zargar, David N Quan, Milad Emamian, Chen Yu Tsao, Hsuan-Chen Wu, Chelsea R Virgile, William E BentleyHigh-Fidelity PCR
    2015Real-Time Sequence-Validated Loop-Mediated Isothermal Amplification Assays for Detection of Middle East Respiratory Syndrome Coronavirus (MERS-CoV).PLoS OneSanchita Bhadra, Yu Sherry Jiang, Mia R Kumar, Reed F Johnson, Lisa E Hensley, Andrew D EllingtonIsothermal Amplification
    2015Selective expression of sense and antisense transcripts of the sushi-ichi-related retrotransposon - derived family during mouse placentogenesis.RetrovirologyChristine Henke, Pamela L Strissel, Maria-Theresa Schubert, Megan Mitchell, Claus C Stolt, Florian Faschingbauer, Matthias W Beckmann, Reiner StrickHigh-Fidelity PCR
    2015Simultaneous generation of many RNA-seq libraries in a single reactionNat MethodsShishkin AA, Giannoukos G, Kucukural A, Ciulla D, Busby M, Surka C, Chen J, Bhattacharyya RP, Rudy RF, Patel MM, Novod N, Hung DT, Gnirke A, Garber M, Guttman M, Livny J
    2015Small RNA-mediated DNA (cytosine-5) methyltransferase 1 inhibition leads to aberrant DNA methylationNucleic Acids ResZhang, G., Esteve, P.O., Chin, H.G., Terragni, J., Dai, N., Correa, I.R. Jr. and Pradhan, S.
    2015Specificity of the ModAll, ModA12 and ModD1 epigenetic regulator N6-adenine DNA methyltransferases of Neisseria MeningitidisNucleic Acids ResSeib, K.L., Jen, F.E., Tan, A., Scott, A.L., Kumar, R., Power, P.M., Chen, L.T., Wu, H.J., Wang, A.H., Hill, D.M., Luyten, Y.A., Morgan, R.D., Roberts, R.J., Maiden, M.C., Boitano, M., Clark, T.A., Korlach, J., Rao, D.N. and Jennings, M.P.
    2015Structural and biochemical studies of a moderately thermophilic exonuclease I from Methylocaldum szegediensePLoS OneFei, L., Tian, S., Moysey, R., Misca, M., Barker, J.J., Smith, M.A., McEwan, P.A., Pilka, E.S., Crawley, L., Evans, T. and Sun, D.
    2015Sul1 and Sul2 Sulfate Transceptors Signal to Protein Kinase A upon Exit of Sulfur Starvation.J Biol ChemHarish Nag Kankipati, Marta Rubio-Texeira, Dries Castermans, George Diallinas, Johan M TheveleinHigh-Fidelity PCR
    2015TALEN-mediated targeting of HPV oncogenes ameliorates HPV-related cervical malignancy.J Clin InvestZheng Hu, Wencheng Ding, Da Zhu, Lan Yu, Xiaohui Jiang, Xiaoli Wang, Changlin Zhang, Liming Wang, Teng Ji, Dan Liu, Dan He, Xi Xia, Tao Zhu, Juncheng Wei, Peng Wu, Changyu Wang, Ling Xi, Qinglei Gao, Gang Chen, Rong Liu, Kezhen Li, Shuang Li, Shixuan Wang, Jianfeng Zhou, Ding Ma, Hui Wang Genome Editing
    2015Ten simple rules to win a nobel prizeRoberts, R.J.
    2015The foles of family B and d DNA polymerases in thermococcus species 9 degrees n okazaki fragment maturationJ Biol ChemGreenough, L., Kelman, Z. and Gardner, A.F.
    2015The RpoE Stress Response Pathway Mediates Reduction of the Virulence of Enteropathogenic Escherichia coli by Zinc.Appl Environ MicrobiolYuan Xue, Jossef Osborn, Anand Panchal, Jay L MelliesHigh-Fidelity PCR
    2015Transcriptional Analysis of Deinococcus radiodurans Reveals Novel Small RNAs That Are Differentially Expressed under Ionizing Radiation.Appl. Environ. Microbiol.Tsai, H.C. et al
    2015Visual detection of isothermal nucleic acid amplification using pH-sensitive dyesBiotechniquesTanner, N.A., Zhang, Y. and Evans, T.C., Jr.
    2015Bias in ligation-based small RNA sequencing library construction is determined by adaptor and RNA structurePLoS OneFuchs, R.T., Sun, Z., Zhuang, F., et al.RNA Analysis
    2015CRISPR/Cas9 nuclease cleavage combined with Gibson assembly for seamless cloningBiotechniquesWang JW, Wang A, Li K, Wang B, Jin S, Reiser M, Lockey RF
    2015Tissue-specific epigenetics in gene neighborhoods: myogenic transcription factor genesHum Mol GenetChandra, S., Terragni, J., Zhang, G., Pradhan, S., Haushka, S., Johnston, D., Baribault, C., Lacey, M. and Ehrlich, M.
    2015The complete methylome of Helicobacter pylori UM032BMC GenomicsLee, W.C., Anton, B.P., Wang, S., Baybayan, P., Singh, S., Ashby, M., Chua, E.G., Tay, C.Y., Thirriot, f., Loke, M.F., Goh, K.L., Marshall, B.J., Robert, R.J. and Vadivelu, J.
    2015Structural basis of asymmetric DNA methylation and ATP-triggered long-range diffusion by EcoP15INature CommunicationsGupta, Y.K., Chan, S.H., Xu, S.Y., and Aggarwal, A.K.
    2015Novel recA-Independent Horizontal Gene Transfer in Escherichia coli K-12PloS OneKingston, A. W., Roussel-Rossin, C., Dupont, C., Raleigh, E. A.
    2015Highly efficient CRISPR/Cas9-mediated TAR cloning of genes and chromosomal loci from complex genomes in yeastNucleic Acids ResLee, NC., Larionov, V., Kouprina, N.
    2015Converting a Sulfenic Acid Reductase into a Disulfide Bond IsomeraseAntioxid Redox SignalChatelle C, Kraemer S, Ren G, Chmura H, Marechal N, Boyd D, Roggemans C, Ke N, Riggs P, Bardwell J, Berkmen M
    2015Pre-Steady-State Kinetic Analysis of a Family D DNA Polymerase from Thermococcus sp. 9°N Reveals Mechanisms for Archaeal Genomic Replication and MaintenanceJ Biol ChemSchermerhorn KM, Gardner AF
    2015Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Agona 460004 2-1, Associated with a Multistate Outbreak in the United StatesGenome AnnouncHoffmann M, Payne J, Roberts RJ, Allard MW, Brown EW, Pettengill JB
    2015Kinetic pathway of 40S ribosomal subunit recruitment to hepatitis C virus internal ribosome entry siteProc Natl Acad Sci U S AGabriele Fuchs, Alexey N Petrov, Caleb D Marceau, Lauren M Popov, Jin Chen, Sen E O'Leary, Richard Wang, Jan E Carette, Peter Sarnow, Joseph D PuglisiSNAP Cell, SNAP Surface
    2015Dynamic caveolae exclude bulk membrane proteins and are required for sorting of excess glycosphingolipidsNat CommunElena Shvets, Vassilis Bitsikas, Gillian Howard, Carsten Gram Hansen, Benjamin J NicholsSNAP Surface
    2015Dissecting the molecular properties of prokaryotic flotillinsPLoS OneJuri Nio Bach, Marc BramkampSNAP Surface, SNAP Cell
    2015Rapid isolation and single-molecule analysis of ribonucleoproteins from cell lysate by SNAP-SiMPullRNAMargaret L Rodgers, Joshua Paulson, Aaron A HoskinsSNAP Surface, SNAP Cell
    2015Stem cells. Asymmetric apportioning of aged mitochondria between daughter cells is required for stemnessScienceP, Katajisto., Dohla, J., Chaffer, CL., Pentinmikko, N., Marjanovic, N., Igbal, S., Zoncu, R., Chen, W., Weinberg, RA., Sabatini, DM.SNAP Cell
    2015Antigenic properties of the human immunodeficiency virus envelope glycoprotein gp120 on virions bound to target cellsPLoS PathogMeron Mengistu, Krishanu Ray, George K Lewis, Anthony L DeVicoSNAP Surface, SNAP Cell
    2015CRL4RBBP7 is required for efficient CENP-A deposition at centromeresJ Cell SciJulien Mouysset, Samuel Gilberto, Michelle G Meier, Fabienne Lampert, Mukta Belwal, Patrick Meraldi, Matthias PeterSNAP Cell
    2014A continuous-exchange cell-free protein synthesis system based on extracts from cultured insect cellsPLoS OneStech M, Quast RB, Sachse R, Schulze C, Wüstenhagen DA, Kubick SGlycobiology
    2014A Modified Janus Cassette (Sweet Janus) to Improve Allelic Replacement Efficiency by High-Stringency Negative Selection in Streptococcus pneumoniaePLoS OneLi Y, Thompson CM, Lipsitch MGibson Assembly®
    2014A Modular Plasmid Assembly Kit for Multigene Expression, Gene Silencing and Silencing Rescue in PlantsPLoS OneBinder A, Lambert J, Morbitzer R, Popp C, Ott T, Lahaye T, Parniske MGolden Gate Assembly, DNA Assembly and Cloning
    2014A restriction enzyme-powered autonomous DNA walking machine: its application for a highly sensitive electrochemiluminescence assay of DNANanoscaleYing Chen, Yun Xiang, Ruo Yuan, Yaqin Chai
    2014A robust TALENs system for highly efficient mammalian genome editingSci RepFeng Y, Zhang S, Huang XDNA Assembly and Cloning, Golden Gate Assembly
    2014A semi-synthetic organism with an expanded genetic alphabetNatureMalyshev, D.A., Dhami, K., Lavergne, T., chen, T., Dai, N., Foster, J.M., Correa Jr., I.R. and Romesberg, F.E.
    2014A Simple Isothermal DNA Amplification Method to Screen Black Flies for Onchocerca volvulus InfectionPLoS OneAlhassan A, Makepeace BL, LaCourse EJ, Osei-Atweneboana MY, Carlow CK
    2014A trimeric lipoprotein assists in trimeric autotransporter biogenesis in enterobacteriaJ Biol ChemGrin I, Hartmann MD, Sauer G, Hernandez Alvarez B, Schütz M, Wagner S, Madlung J, Macek B, Felipe-Lopez A, Hensel M, Lupas A, Linke DPhage Display
    2014A versatile system for USER cloning-based assembly of expression vectors for mammalian cell engineeringPLoS OneLund AM, Kildegaard HF, Petersen MB, Rank J, Hansen BG, Andersen MR, Mortensen UHUSER™ Cloning
    2014An RNA aptamer that specifically binds to the glycosylated hemagglutinin of avian influenza virus and suppresses viral infection in cellsPLoS OneKwon HM, Lee KH, Han BW, Han MR, Kim DH, Kim DEGlycobiology
    2014Analysis of hundreds of cis-regulatory landscapes at high resolution in a single, high-throughput experimentNat Genet Jim R Hughes, Nigel Roberts, Simon McGowan, Deborah Hay, Eleni Giannoulatou, Magnus Lynch, Marco De Gobbi, Stephen Taylor, Richard Gibbons, Douglas R HiggsEpigenetics, Restriction Enzymes for Epigenetics, DNA Methylation Analysis
    2014Biomimetic Magnetite Formation From Biocombinatorial Approaches to Mineralization EffectsLangmuirBaumgartner J, Carillo MA, Eckes KM, Werner P, Faivre D.Phage Display
    2014Boronic acid-mediated polymerase chain reaction for gene- and fragment-specific detection of 5-hydroxymethylcytosineNucleic Acids ResZhao C, Wang H, Zhao B, Li C, Yin R, Song M, Liu B, Liu Z, Jiang G
    2014Characterization of cleavage intermediate and star sites of RM.Tth111II.Sci RepZhu, Z., Guan, S., Robinson, D., El Fezzazi, H., Quimby, A. and Xu, S-Y.
    2014Clathrin-independent pathways do not contribute significantly to endocytic fluxElifeBitsikas V, Corrêa IR, Nichols BJ
    2014Co-evolution between an Endosymbiont and Its Nematode Host: Wolbachia Asymmetric Posterior Localization and AP Polarity EstablishmentPLoS Negl Trop Dis Landmann F, Foster JM, Michalski ML, Slatko BE, Sullivan W
    2014Cofactor-Independent Phosphoglycerate Mutase from Nematodes Has Limited Druggability, as Revealed by Two High-Throughput ScreensPLoS Negl Trop Dis.Crowther, G.J., Booker, M.L., He, M., Li, T., Raverdy, S., Novelli, J.F., He, P., Dale, N.R.G., Fife, A.M., Barker, R.H., Jr., Kramer, M.L., Van Voorhis, W.C., Carlow, C.K.S. and Wang, M-W.
    2014Comparison of Subtypes of Listeria monocytogenes Isolates from Naturally Contaminated Watershed Samples with and without a Selective Secondary EnrichmentPLoS ONEGorski L, Walker S, Liang AS, Nguyen KM, Govoni J, et al.
    2014Concurrent transcriptional profiling of Dirofilaria immitis and its Wolbachia endosymbiont throughout the nematode life cycle reveals coordinated gene expressionBMC GenomicsLuck, A.N., Evans, C.C., Foster, J.M., et al.
    2014Consequences of the disease-related L78R mutation for dimerization and activity of STAT3J Cell SciDomoszlai T, Martincuks A, Fahrenkamp D, Schmitz-Van de Leur H, Küster A, Müller-Newen GSNAP Cell, Cellular Analysis
    2014Development of VHH Antibodies against Dengue Virus Type 2 NS1 and Comparison with Monoclonal Antibodies for Use in Immunological DiagnosisPLoS OneFatima A, Wang H, Kang K, Xia L, Wang Y, Ye W, Wang J, Wang X.Phage Display
    2014DevR (DosR) mimetic peptides impair transcriptional regulation and survival of Mycobacterium tuberculosis under hypoxia by inhibiting the autokinase activity of DevS sensor kinaseBMC MicrobiolKaur K, Taneja NK, Dhingra S, Tyagi JSPhage Display
    2014Diversity and Expression of MicroRNAs in the Filarial Parasite, Brugia malayi.PLoS OnePoole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA.
    2014Elimination of inter-domain interactions increases the cleavage fidelity of the restriction endonuclease DraIIIProtein CellZhuo W, Lai X, Zhang L, Chan SH, Li F, Zhu Z, Yang M, Sun D
    2014Engineering Bacterial Transcription Regulation To Create a Synthetic in Vitro Two-Hybrid System for Protein Interaction AssaysJ Am Chem SocZhou Y, Asahara H, Schneider N, Dranchak P, Inglese J, Chong S
    2014Engineering hydrogen gas production from formate in a hyperthermophile by heterologous production of an 18-subunit membrane-bound complexJ Biol ChemLipscomb GL, Schut GJ, Thorgersen MP, Nixon WJ, Kelly RM, Adams MWGibson Assembly®
    2014Engineering nicking enzymes that preferentially nick 5-methylcytosine-modified DNANucleic Acids ResGutjahr A, Xu SYGibson Assembly®
    2014Enhanced gene disruption by programmable nucleases delivered by a minicircle vector.Gene TherA-Bk Dad, S Ramakrishna, M Song, H KimGenome Editing
    2014Epigenetic silencing of apoptosis-inducing gene expression can be efficiently overcome by combined SAHA and TRAIL treatment in uterine sarcoma cellsPLoS OneFröhlich LF, Mrakovcic M, Smole C, Lahiri P, Zatloukal K
    2014Establishment of a CpG island microarray for analyses of genome-wide DNA methylation in Chinese hamster ovary cellsAppl Microbiol BiotechnolWippermann A, Klausing S, Rupp O, Albaum SP, Büntemeyer H, Noll T, Hoffrogge R
    2014Evaluation of fluorophores to label SNAP-tag fused proteins for multicolor single-molecule tracking microscopy in live cellsBosch PJ, Corrêa IR Jr, Sonntag MH, Ibach J, Brunsveld L, Kanger JS, Subramaniam V
    2014Evolution, mechanisms, and applications of intein-mediated protein splicingJ Biol ChemPerler FB, Allewell NM
    2014Expanded genetic codes in next generation sequencing enable decontamination and mitochondrial enrichmentPLoS OneMcKernan KJ, Spangler J, Zhang L, Tadigotla V, McLaughlin S, Warner J, Zare A, Boles RG
    2014Functional characterization improves associations between rare non-synonymous variants in CHRNB4 and smoking behaviorPLoS OneHaller G, Li P, Esch C, Hsu S, Goate AM, Steinbach JHGlycobiology
    2014Fusion of catalytically inactive Cas9 to FokI nuclease improves the specificity of genome modificationNat BiotechnolGuilinger JP, Thompson DB, Liu DRGibson Assembly®
    2014G-CSF does not influence C2C12 myogenesis despite receptor expression in healthy and dystrophic skeletal muscleFront PhysiolWright CR, Brown EL, Della-Gatta PA, Ward AC, Lynch GS, Russell APGlycobiology
    2014Gene and protein sequence optimization for high-level production of fully active and aglycosylated lysostaphin in Pichia pastorisAppl Environ MicrobiolZhao H, Blazanovic K, Choi Y, Bailey-Kellogg C, Griswold KEGlycobiology
    2014Generation of West Nile virus infectious clones containing amino acid insertions between capsid and capsid anchorVirusesVandergaast R, Hoover LI, Zheng K, Fredericksen BLGibson Assembly®
    2014Genome and Metagenome Sequencing: Using the Human Methyl-Binding Domain to Partition Genomic DNA Derived from Plant TissuesApplications in Plant SciencesErbay Yigit, David I. Hernandez, Joshua T. Trujillo, Eileen Dimalanta, and C. Donovan Bailey
    2014Genomics of CpG methylation in developing and developed zebrafishG3 (Bethesda)McGaughey DM, Abaan HO, Miller RM, Kropp PA, Brody LC
    2014Highlights of the DNA cutters: a short history of the restriction enzymes.Nucleic Acids ResLoenen, W.A., Dryden, D.T., Raleigh, E.A., Wilson, G.G., Murray, N.E.Restriction Enzyme Digestion, Restriction Enzyme Digestion
    2014Highlights of the DNA cutters: a short history of the restriction enzymesNucleic Acids ResLoenen WA, Dryden DT, Raleigh EA, Wilson GG, Murray NE
    2014Identification and Biosynthesis of a Novel Xanthomonadin-Dialkylresorcinol-Hybrid from Azoarcus sp. BH72PLoS OneSchöner TA, Fuchs SW, Reinhold-Hurek B, Bode HBGibson Assembly®
    2014Identification and Characterization of a Proteolytically Primed Form of the Murine Coronavirus Spike Proteins after Fusion with the Target CellJ VirolWicht O, Burkard C, de Haan CA, van Kuppeveld FJ, Rottier PJ, Bosch BJGlycobiology
    2014Identification and Characterization of a Suite of Tumor Targeting Peptides for Non-Small Cell Lung CancerSci RepMcGuire MJ, Gray BP, Li S, Cupka D, Byers LA, Wu L, Rezaie S, Liu YH, Pattisapu N, Issac J, Oyama T, Diao L, Heymach JV, Xie XJ, Minna JD, Brown KCPhage Display
    2014Identification and characterization of mutant clones with enhanced propagation rates from phage-displayed peptide librariesAnal BiochemNguyen KT, Adamkiewicz MA, Hebert LE, Zygiel EM, Boyle HR, Martone CM, Meléndez-Ríos CB, Noren KA, Noren CJ, Hall MFPhage Display
    2014Identification and characterization of mutant clones with enhanced propagation rates from phage-displayed peptide librariesAnal BiochemNguyen KT, Adamkiewicz MA, Hebert LE, Zygiel EM, Boyle HR, Martone CM, Meléndez-Ríos CB, Noren KA, Noren CJ, Hall MF
    2014Identification of restriction-modification systems of Bifidobacterium animalis subsp. lactis CNCM I-2494 by SMRT sequencing and associated methylome analysisPLoS OneO'Connell Motherway M, Watson D, Bottacini F, Clark TA, Roberts RJ, Korlach J, Garault P, Chervaux C, van Hylckama Vlieg JE, Smokvina T, van Sinderen D
    2014Impact of a transposon insertion in phzF2 on the specialized metabolite production and interkingdomJ BacteriolPhelan VV, Moree WJ, Aguilar J, Cornett DS, Koumoutsi A, Noble SM, Pogliano K, Guerrero CA, Dorrestein PCGibson Assembly®
    2014Insights into bacterial CO2 metabolism revealed by the characterization of four carbonic anhydrases in Ralstonia eutropha H16AMB ExpressGai CS, Lu J, Brigham CJ, Bernardi AC, Sinskey AJGibson Assembly®
    2014Insights into the initiation of JC virus DNA replication derived from the crystal structure of the T-antigen origin binding domainPLoS PathogMeinke G, Phelan PJ, Kalekar R, Shin J, Archambault J, Bohm A, Bullock PAGibson Assembly®
    2014Integration of growth and patterning during vascular tissue formation in ArabidopsisScienceBert De Rybel, Milad Adibi, Alice S. Breda, Jos R. Wendrich, Margot E. Smit, Ondej Novk, Nobutoshi Yamaguchi, Saiko Yoshida, Gert Van Isterdael, Joakim Palovaara, Bart Nijsse, Mark V. Boekschoten, Guido Hooiveld, Tom Beeckman, Doris Wagner, Karin Ljung, Christian Fleck, Dolf WeijersHigh-Fidelity PCR
    2014Intranasal mRNA nanoparticle vaccination induces prophylactic and therapeutic anti-tumor immunitySci RepPhua KK, Staats HF, Leong KW, Nair SK
    2014Live-cell reporters for fluorescence imagingCurr Opin Chem BiolCorrêa IR Jr.
    2014Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.ScienceJaitin, DA., Kenigsberg, E., Keren-Shaul, H., Elefant, N., Paul, F., Zaretsky, I., Mildner, A., Cohen, N., Jung, S., Tanay, A. and Amit, I.
    2014MBD4 cooperates with DNMT1 to mediate methyl-DNA repression and protects mammalian cells from oxidative stressEpigeneticsLaget S, Miotto B, Chin HG, Estève PO, Roberts RJ, Pradhan S, Defossez PA
    2014Mediated enrichment of siRNAsMethods in Molecular Biology Jin J., McReynolds L.A. and Gullerova M.
    2014Methyllysine reader plant homeodomain (PHD) finger protein 20-like 1 (PHF20L1) antagonizes DNA (cytosine-5) methyltransferase 1 (DNMT1) proteasomal degradationJ Biol ChemEstève PO, Terragni J, Deepti K, Chin HG, Dai N, Espejo A, Corrêa IR Jr, Bedford MT, Pradhan S
    2014Modification-dependent restriction endonuclease, MspJI, flips 5-methylcytosine out of the DNA helixNucleic Acids ResHorton JR, Wang H, Mabuchi MY, Zhang X, Roberts RJ, Zheng Y, Wilson GG, Cheng X
    2014Modification-dependent restriction endonuclease, MspJI, flips 5-methylcytosine out of the DNA helixNucleic Acids ResearchHorton, J.R., Wang, H., Mabuchi, M.Y., Zhang, X., Roberts, R.J., Zheng, Y., Wilson, G.G., Cheng, X
    2014Modular assembly of designer PUF proteins for specific post-transcriptional regulation of endogenous RNAJ Biol EngAbil Z, Denard CA, Zhao HGolden Gate Assembly, DNA Assembly and Cloning
    2014Molecular evolution of the Yap/Yorkie proto-oncogene and elucidation of its core transcriptional programMol Biol EvolIkmi A, Gaertner B, Seidel C, Srivastava M, Zeitlinger J, Gibson MCGibson Assembly®
    2014Molecular evolution of the Yap/Yorkie proto-oncogene and elucidation of its core transcriptional programMol Biol EvolIkmi A, Gaertner B, Seidel C, Srivastava M, Zeitlinger J, Gibson MCGibson Assembly®
    2014Multiplex genome engineering in human cells using all-in-one CRISPR/Cas9 vector systemSci RepSakuma T, Nishikawa A, Kume S, Chayama K, Yamamoto TGolden Gate Assembly
    2014Mutations in four glycosyl hydrolases reveal a highly coordinated pathway for rhodopsin biosynthesis and N-glycan trimming in Drosophila melanogasterPLoS GenetRosenbaum EE, Vasiljevic E, Brehm KS, Colley NJGlycobiology
    2014Myogenic differential methylation: diverse associations with chromatin structureBiology (Basel)Chandra S, Baribault C, Lacey M, Ehrlich MEpigenetics
    2014Neurospora crassa Female Development Requires the PACC and Other Signal Transduction Pathways, Transcription Factors, Chromatin Remodeling, Cell-To-Cell Fusion, and AutophagyPLoS OneChinnici JL, Fu C, Caccamise LM, Arnold JW, Free SJGibson Assembly®,
    2014Objective: biochemical functionFront GenetAnton BP, Kasif S, Roberts RJ, Steffen M
    2014Ordering of mutations in preinvasive disease stages of esophageal carcinogenesisNat GenetWeaver JM, Ross-Innes CS, Shannon N, Lynch AG, Forshew T, Barbera M, Murtaza M, Ong CA, Lao-Sirieix P, Dunning MJ, Smith L, Smith ML, Anderson CL, Carvalho B, O'Donovan M, Underwood TJ, May AP, Grehan N, Hardwick R, Davies J, Oloumi A, Aparicio S, Caldas C, Eldridge MD, Edwards PA, Rosenfeld N, Tavaré S, Fitzgerald RC; OCCAMS Consortium
    2014Overview of cell-free protein synthesis: historic landmarks, commercial systems, and expanding applicationsCurr Protoc Mol BiolChong S
    2014p19-mediated enrichment and detection of siRNAsMethods Mol BiolJin J, McReynolds LA, Gullerova M
    2014Phosphorylation decreases ubiquitylation of the thiazide-sensitive cotransporter NCC and subsequent clathrin-mediated endocytosisJ Biol ChemRosenbaek LL, Kortenoeven ML, Aroankins TS, Fenton RAGlycobiology
    2014Polynucleotide 3'-terminal phosphate modifications by RNA and DNA ligasesJournal of Biological ChemistryAlexander M. Zhelkovsky and Larry A. McReynolds
    2014Probing homodimer formation of epidermal growth factor receptor by selective crosslinkingEur J Med ChemSun X, Dusserre-Bresson F, Baker B, Zhang A, Xu P, Fibbe C, Noren CJ, Corrêa IR Jr, Xu MQ
    2014Procerain B, a cysteine protease from Calotropis procera, requires N-terminus pro-region for activity: cDNA cloning and expression with pro-sequence.Protein Expr PurifVidhyadhar Nandana, Sushant Singh, Abhay Narayan Singh, Vikash Kumar DubeyHigh-Fidelity PCR
    2014Production of Disulfide-Bonded Proteins in Escherichia coliCurr Protoc Mol BiolKe N, Berkmen M
    2014Prospective identification of parasitic sequences in phage display screensNucleic Acids ResMatochko WL, Cory Li S, Tang SK, Derda RPhage Display
    2014Protein splicing: how inteins escape from precursor proteinsJ Biol ChemMills KV, Johnson MA, Perler FB
    2014Protein synthesis using a reconstituted cell-free systemCurr Protoc Mol BiolTuckey C, Asahara H, Zhou Y, Chong S
    2014Rapid and Efficient Assembly of Transcription Activator-Like Effector Genes by USER CloningJ Genet GenomicsWang S, Li W, Wang S, Hu BUSER™ Cloning
    2014RNA-RNA Interactions Enable Specific Targeting of Noncoding RNAs to Nascent Pre-mRNAs and Chromatin SitesCellJesse M. Engreitz, Klara Sirokman, Patrick McDonel, Alexander A. Shishkin, Christine Surka, Pamela Russell, Sharon R. Grossman, Amy Y. Chow, Mitchell Guttman, and Eric S. Lander
    2014Role of lipid rafts and GM1 in the segregation and processing of prion proteinPLoS OneBotto L, Cunati D, Coco S, Sesana S, Bulbarelli A, Biasini E, Colombo L, Negro A, Chiesa R, Masserini M, Palestini PGlycobiology
    2014Sequencing of captive target transcripts identifies the network of regulated genes and functions of primate-specific miR-522Cell RepTan SM, Kirchner R, Jin J, Hofmann O, McReynolds L, Hide W, Lieberman J
    2014Serine and proline-rich ligands enriched via phage-display technology show preferential binding to BCR/ABL expressing cellsHematol Oncol Stem Cell TherShires K, Shankland I, Mowla S, Njikan S, Jaymacker J, Novitzky NPhage Display
    2014SpeedyGenes: an improved gene synthesis method for the efficient production of error-corrected, synthetic protein libraries for directed evolutionProtein Eng Des SelCurrin A, Swainston N, Day PJ, Kell DB
    2014Spontaneous in vitro senescence of glioma cells confirmed by an antibody against IDH1R132HAnticancer ResStoczynska-Fidelus E, Och W, Rieske P, Bienkowski M, Banaszczyk M, Winiecka-Klimek M, Zieba J, Janik K, Rosiak K, Treda C, Stawski R, Radomiak-Zaluska A, Piaskowski S
    2014Strand Invasion Based Amplification (SIBA®): A Novel Isothermal DNA Amplification Technology Demonstrating High Specificity and Sensitivity for a Single Molecule of Target AnalytePLoS OneHoser MJ, Mansukoski HK, Morrical SW, Eboigbodin KE
    2014Structure and mutagenesis of the DNA modification-dependent restriction endonuclease AspBHISci RepHorton JR, Nugent RL, Li A, Mabuchi MY, Fomenkov A, Cohen-Karni D, Griggs RM, Zhang X, Wilson GG, Zheng Y, Xu SY, Cheng X
    2014Structure of 5-hydroxymethylcytosine-specific restriction enzyme AbaSI in complex with DNANucleic Acids ResHorton JR, Borgaro JG, Griggs RM, Quimby A, Guan S, Zhang X, Wilson GG, Zheng Y, Zhu Z, Cheng X
    2014Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNANatureHashimoto H, Pais JE, Zhang X, Saleh L, Fu ZQ, Dai N, Corrêa IR Jr, Zheng Y, Cheng X
    2014Structure of the Trehalose-6-phosphate Phosphatase from Brugia malayi Reveals Key Design Principles for Anthelmintic DrugsPLoS PathogFarelli JD, Galvin BD, Li Z, Liu C, Aono M, Garland M, Hallett OE, Causey TB, Ali-Reynolds A, Saltzberg DJ, Carlow CK, Dunaway-Mariano D, Allen KN
    2014The ambrosia symbiosis is specific in some species and promiscuous in others: evidence from community pyrosequencing.ISME JMartin Kostovcik, Craig C Bateman, Miroslav Kolarik, Lukasz L Stelinski, Bjarte H Jordal, Jiri HulcrHigh-Fidelity PCR
    2014The CLO3403/CLO3404 Two-Component System of Clostridium botulinum E1 Beluga Is Important for Cold Shock Response and Growth at Low TemperaturesAppl Environ MicrobiolMascher G, Derman Y, Kirk DG, Palonen E, Lindström M, Korkeala H
    2014The complex methylome of the human gastric pathogen Helicobacter pyloriNucleic Acids ResKrebes J, Morgan RD, Bunk B, Spröer C, Luong K, Parusel R, Anton BP, König C, Josenhans C, Overmann J, Roberts RJ, Korlach J, Suerbaum S
    2014The N-terminal domain modulates α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) receptor desensitizationJ Biol ChemMöykkynen T, Coleman SK, Semenov A, Keinänen KGlycobiology
    2014The other face of restriction: modification-dependent enzymes.Nucleic Acids ResLoenen, W.A., Raleigh, E.A.Restriction Enzyme Digestion, Restriction Enzyme Digestion
    2014The Serine-Threonine Protein Kinase PAK4 Is Dispensable in Zebrafish: Identification of a Morpholino-Generated PseudophenotypePLoS OneLaw SH, Sargent TDGibson Assembly®
    2014The uric acid transporter SLC2A9 is a direct target gene of the tumor suppressor p53 contributing to antioxidant defenseOncogeneItahana Y, Han R, Barbier S, Lei Z, Rozen S, Itahana KGlycobiology
    2014Therapeutic epitopes of Leptospira LipL32 protein and their characteristicsProtein Eng Des SelManeewatch S, Adisakwattana P, Chaisri U, Saengjaruk P, Srimanote P, Thanongsaksrikul J, Sakolvaree Y, Poungpan P, Chaicumpa WPhage Display
    2014Time-resolved fluorescence of 2-aminopurine in DNA duplexes in the presence of the EcoP15I Type III restriction-modification enzymeBiochem Biophys Res CommunMa L, Wu X, Wilson GG, Jones AC, Dryden DT
    2014Transcriptomic analysis of carboxylic acid challenge in Escherichia coli: beyond membrane damagePLoS OneRoyce LA, Boggess E, Fu Y, Liu P, Shanks JV, Dickerson J, Jarboe LRGibson Assembly®
    2014Transient accumulation of 5-carboxylcytosine indicates involvement of active demethylation in lineage specification of neural stem cellsCell RepWheldon LM, Abakir A, Ferjentsik Z, Dudnakova T, Strohbuecker S, Christie D, Dai N, Guan S, Foster JM, Corrêa IR Jr, Loose M, Dixon JE, Sottile V, Johnson AD, Ruzov A
    2014Trypanosome MKT1 and the RNA-binding protein ZC3H11: interactions and potential roles in post-transcriptional regulatory networksNucleic Acids ResSingh A, Minia I, Droll D, Fadda A, Clayton C, Erben E
    2014Tuning the electrical properties of the heart by differential trafficking of KATP ion channel complexesJ Cell SciArakel EC, Brandenburg S, Uchida K, Zhang H, Lin YW, Kohl T, Schrul B, Sulkin MS, Efimov IR, Nichols CG, Lehnart SE, Schwappach BGlycobiology
    2014Type I restriction enzymes and their relativesNucleic Acids ResLoenen WA, Dryden DT, Raleigh EA, Wilson GG
    2014Type II Cadherins Guide Assembly of a Direction-Selective Retinal Circuit.CellXin Duan, Arjun Krishnaswamy, Irina De la Huerta, Joshua R SanesHigh-Fidelity PCR
    2014Type II restriction endonucleases-a historical perspective and moreNucleic Acids ResPingoud A, Wilson GG, Wende W
    2014Ubiquity and diversity of human-associated demodex mites.PLoS OneMegan S Thoemmes, Daniel J Fergus, Julie Urban, Michelle Trautwein, Robert R DunnRoutine PCR
    2014Validation of microinjection methods for generating knockout mice by CRISPR/Cas-mediated genome engineeringSci RepHorii T, Arai Y, Yamazaki M, Morita S, Kimura M, Itoh M, Abe Y, Hatada IGibson Assembly®
    2014Whole-genome haplotyping using long reads and statistical methods.Nature BiotechnologyKuleshov, K. et al.
    2014Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequenceGenes DevHashimoto H, Olanrewaju YO, Zheng Y, Wilson GG, Zhang X, Cheng X
    2014Wolbachia endosymbionts and human disease controlMol. Biochem. Parasitol.Slatko, B. E., Luck, A. N., Dobson, S. L. and Foster, J. M.
    2014REBASE - A database for DNA restriction and modification: enzymes, genes and genomesNucleic Acids Research, Advance Access Roberts, R.J., Vincze, T., Posfai, J., Macelis, D.
    2014PCR amplification of a triple-repeat genetic target directly from whole blood in 15 minutes as a proof-of-principle PCR study for direct sample analysis for a clinically relevant targetBMC Med GenetConnelly CM1, Porter LR2, TerMaat JR
    2014A simple and efficient strategy for the de novo construction of greater-than-genome-length hepatitis B virus repliconsJ Virol MethodsWang XJ, Zhang XJ, Hu W, Zhang TY, Wang SQ
    2014Protein-protein interactions leading to the recruitment of the host DNA sliding clamp by the hyperthermophilic archaeal virus SIRV2J VirolGardner AF, Bell SD, White MF, Prangishvili D, Krupovic M
    2014Type I restriction enzymes and their relativesNucleic Acids ResearchWil A. M. Loenen, David T. F. Dryden, Elisabeth A. Raleigh, Geoffrey G. Wilson
    2014Structural basis for Klf4 recognition of methylated DNANucleic Acids ResearchYiwei Liu, Yusuf Olatunde Olanrewaju, Yu Zheng, Hideharu Hashimoto, Robert M. Blumenthal, Xing Zhang, Xiaodong Cheng
    2014Characterization of Family D DNA polymerase from Thermococcus sp. 9°NExtremophilesGreenough L, Menin JF, Desai NS, Kelman Z, Gardner AF
    2014Efficient DNA ligation in DNA–RNA hybrid helices by Chlorella virus DNA ligaseNucleic Acids ResearchGregory J. S. Lohman, Yinhua Zhang, Alexander M. Zhelkovsky, Eric J. Cantor, Thomas C. Evans Jr.
    2014Anti-Wolbachia drug discovery and development: safe macrofilaricides for onchocerciasis and lymphatic filariasisParasitology/FirstView ArticleTaylor, M.J., Hoerauf, A., Townson, S., Slatko, B.E. and Ward, S.A.
    2014Loop-mediated isothermal amplification for detection of nucleic acidsCurr Protoc Mol BiolTanner NA, Evans TC Jr.Isothermal Amplification
    2013A membrane-bound NAC transcription factor, ANAC017, mediates mitochondrial retrograde signaling in ArabidopsisPlant CellNg S, Ivanova A, Duncan O, Law SR, Van Aken O, De Clercq I, Wang Y, Carrie C, Xu L, Kmiec B, Walker H, Van Breusegem F, Whelan J, Giraud EGibson Assembly®
    2013A near-infrared fluorophore for live-cell super-resolution microscopy of cellular proteins. Nature ChemistryLukinavicius, G., Umezawa, K., Olivier, N., Honigmann, A., Yang, G., Plas, T., Mueller, M., Reymond, L., Correa, I.R., Jr., Luo, Z.-G., Schultz, C., Lemke, E.A., Heppenstall, P., Eggeling, C., Manley, S. and Johnsson, K.
    2013A Protocol for Construction of Gene Targeting Vectors and Generation of Homologous Recombinant Embryonic Stem CellsMethods in Molecular BiologyHicham Bouabe, Klaus Okkenhaug
    2013Active stabilization of human endothelial nitric oxide synthase mRNA by hnRNP E1 protects against antisense RNA and microRNAsMol Cell Biol. Ho, J.J., Robb, G.B., Tai, S.C., Turgeon, P.J., Mawji, I.A., Man, H.S. and Marsden, P.A.
    2013Bacterial GenesBrenner's Encyclopedia of GeneticsRaleigh, E.A.
    2013 Biochemical and physiological characterization of fut4 and fut6 mutants defective in arabinogalactan-protein fucosylation in Arabidopsis.J. Exp. Bot.Liang, Y., Basu, D., Pattathil, S., Xu, W.L., Venetos, A., Martin, S.L., Faik, A., Hahn, M.G. and Showalter, A.M.
    2013Biochemical Characterization of Hypothetical Proteins from Helicobacter pylori.PLOS ONE Choi HP, Juarez S, Ciordia S, Fernandez M, Bargiela R, Albar JP, Mazumdar V, Anton BP, Kasif S, Ferrer M, Steffen M.
    2013Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencingNucleic Acids ResearchClark, T.A., Murray, I.A., Morgan, R.D., Kislyuk, A.O., Spittle, K.E., Boitano, M., Fomenkov, A., Roberts, R.J. and Korlach, J.
    2013Characterization of human plasma-derived exosomal RNAs by deep sequencingBMC GenomicsHuang, X. et al.
    2013Complete Genome Sequence of a Multidrug-Resistant Salmonella enterica Serovar Typhimurium var. 5- Strain Isolated from Chicken BreastGenome AnnouncHoffmann M, Muruvanda T, Allard MW, Korlach J, Roberts RJ, Timme R, Payne J, McDermott PF, Evans P, Meng J, Brown EW, Zhao S
    2013ConjugationBrenner's Encyclopedia of GeneticsRaleigh, E.A. and Low, K.B.
    2013Digital droplet PCR for rapid quantification of donor DNA in the circulation of transplant recipients as a potential universal biomarker of graft injury.Clin. Chem.Beck J, Bierau S, Balzer S, Andag R, Kanzow P, Schmitz J, Gaedcke J, Moerer O, Slotta JE, Walson P, Kollmar O, Oellerich M, Schütz E.
    2013Efficient genome editing in Caenorhabditis elegans by CRISPR-targeted homologous recombinationNucleic Acids ResChen C, Fenk LA, de Bono MGibson Assembly®
    2013Fast mitochondrial DNA isolation from mammalian cells for next-generation sequencingBiotechniquesWilber Quispe-Tintaya, Ryan R White, Vasily N Popov, Jan Vijg, Alexander Y Maslov
    2013Faster Protein Splicing with the Nostoc punctiforme DnaE Intein Using Non-native Extein ResiduesJ Biol ChemCheriyan, M., Pedamallu, C.S., Tori, K. and Perler, F.
    2013Fully assembled genome sequence for Salmonella enterica subsp. Enterica Serovar Javiana CFSAN001992.  Genome Announcements Allard, M.W. Muruvanda, T., Strain, E., Timme, R., Luo, Y., Wang, C., Keys, C.E., Payne, J., Cooper, T. Luong, K., Song, Y., Chin, C.-S., Korlach, J., Roberts, R.J., Evans, P., Musser, S.M., Brown, E.W.
    2013Gene synthesis by assembly of deoxyuridine-containing oligonucleotidesMethods Mol Biol. Vaisvila, R. and Bitinaite, J.
    2013Genome engineering in Saccharomyces cerevisiae using CRISPR-Cas systemsNucleic Acids ResDiCarlo JE, Norville JE, Mali P, Rios X, Aach J, Church GMGibson Assembly®
    2013Genome-wide hydroxymethylation tested using the HELP-GT assay shows redistribution in cancerNucleic Acids ResearchBhattacharyya, S., Yu, Y., Suzuki, M., Campbell, N., Mazdo, J., Vasanthakumar, A., et al.5-hmC Detection & Analysis, Methods of 5-hmC Detection and Analysis
    2013GoldenBraid 2.0: A Comprehensive DNA Assembly Framework for Plant Synthetic BiologyPlant PhysiologyAlejandro Sarrion-Perdigones, Marta Vazquez-Vilar, Jorge Palací, Bas Castelijns, Javier Forment, Peio Ziarsolo, José Blanca, Antonio Granell, Diego OrzaezGolden Gate Assembly
    2013Hedgehog Signaling Regulates MyoD Expression and ActivityJ Biol ChemAnastassia Voronova Erin Coyne, Ashraf Al Madhoun, Joel V. Fair, Neven Bosiljcic, Catherine St-Louis, Grace Li, Sherry Thurig, Valerie A. Wallace, Nadine Wiper-Bergeron, and Ilona S. Skerjanc
    2013High-Resolution Enzymatic Mapping of Genomic 5-Hydroxymethylcytosine in Mouse Embryonic Stem CellsCell RepSun, Z., Jolyon, T., Borgaro, J.G., Liu, Y., Yu, L., Guan, S., Wang, H., Sun, D., Cheng, X., Zhu, Z., Pradhan, S. and Zheng, Y.
    2013High-throughput sequencing of methylated cytosine enriched by modification-dependent restriction endonuclease MspJIBMC GeneticsXiaojun Huang, Hanlin Lu, Jun-Wen Wang, Liqin Xu, Siyang Liu, Jihua Sun, Jun Wang, Fei Gao
    2013High-resolution enzymatic mapping of 5-hydroxymethylcytosine in mouse embryonic stem cellsCell Rep.Sun, Z. et al.
    2013Identification of new proteins that modulate the germination of spores of bacillus speciesJ BacteriolRamirez-Peralta A, Gupta S, Butzin XY, Setlow B, Korza G, Leyva-Vazquez MA, Christie G, Setlow PGibson Assembly®
    2013Increasing cleavage specificity and activity of restriction endonuclease KpnINucleic Acids ResearchKommireddy Vasu, Easa Nagamalleswari, Mai Zahran, Petra Imhof, Shuang-yong Xu, Zhenyu Zhu, Siu-Hong Chan, Valakunja Nagaraja
    2013Interdomain lateral gene transfer of an essential ferrochelatase gene in human parasitic nematodesProc. Nat. Acad. Sci. Wu, B., Novelli, J., Jiang, D., Dailey, H.A., Landmann, F., Ford, L., Taylor, M.J., Carlow, C.K.S., Kumar, S., Foster, J.M. and Slatko, B.E.
    2013Protein engineering: single or multiple site-directed mutagenesis Methods Mol Biol. Hsieh, P.C. and Vaisvila, R.
    2013Quantifying Elongation Rhythm during Full-Length Protein SynthesisRosenblum G, Chen C, Kaur J, Cui X, Zhang H, Asahara H, Chong S, Smilansky Z, Goldman YE, Cooperman BS.
    2013Rapid, modular and reliable construction of complex mammalian gene circuitsNucleic Acids ResGuye P, Li Y, Wroblewska L, Duportet X, Weiss RGibson Assembly®
    2013Restriction endonuclease TseI cleaves A:A and T:T mismatches in CAG and CTG repeatsNucleic Acids ResMa L, Chen K, Clarke DJ, Nortcliffe CP, Wilson GG, Edwardson JM, Morton AJ, Jones AC, Dryden DT
    2013Ribosome profiling provides evidence that large noncoding RNAs do not encode proteinsCellGuttman M, Russell P, Ingolia NT, Weissman JS, Lander ES
    2013RNA-Methylation-Dependent RNA Processing Controls the Speed of the Circadian ClockCellFustin, J.-M. et al.
    2013RNAi triggered by specialized machinery silences developmental genes and retrotransposonsNatureYamanaka, S., Mehta, S., Reyes-Turcu, F.E., Zhuang, F., Fuchs, R.T., Rong, Y., Robb, G.B. and Grewal, S.I.
    2013Role of DNA methylation in expression and transmission of porcine endogenous retroviruses.Journal of Virology.Matousková, M., Vesely, P., Daniel, P., Mattiuzzo, G., Hector, R.D., Scobie, L., Takeuchi, Y. and Hejnar, J.
    2013ROLE OF HUMAN HYPOXANTHINE GUANINE PHOSPHORIBOSYLTRANSFERASE IN ACTIVATION OF THE ANTIVIRAL AGENT T-705 (FAVIPIRAVIR)Molecular Pharmacology Fast ForwardLieve Naesens, Luke Guddat, Dianne Keough, André B.P. van Kuilenburg, Judith Meijer, Johan Vande Voorde and Jan Balzarini
    2013Segregation of Family A G Protein Coupled Receptor Protomers in the Plasma MembraneMolecular PharmacologyAnthony Gavalas, Tien-Hung Lan, Qiuju Liu, Ivan R. Corrêa, Jr., Jonathan A. Javitch, and Nevin A. Lambert
    2013Selection of a Mimotope Peptide of S-adenosyl-l-homocysteine and Its Application in ImmunoassaysMoleculesWu C. and Tzertzinis G. 
    2013Single-stranded DNA library preparation for the sequencing of ancient or damaged DNANat. Protoc.Gansauge MT, Meyer M.
    2013Substrates for Improved Live-Cell Fluorescence Labeling of SNAP-tagCurrent Pharmaceutical DesignIvan R. Corrêa Jr, Brenda Baker, Aihua Zhang, Luo Sun, Christopher R. Provost, Grazvydas Lukinavicius, Luc Reymond, Kai Johnsson, and Ming-Qun Xu
    2013Targeted delivery of proapoptotic peptides to tumor-associated macrophages improves survivalProc. Natl. Acad. Sci. Cieslewicz, M. et alPhage Display
    2013Targeted drug delivery systems mediated by a novel peptide in breast cancer therapy and imagingPLoS OneLu, R.-M. et alPhage Display
    2013The advantages of SMRT™ sequencing.  Genome Biology Roberts, R.J., Carneiro, M.O., Schatz, M.C.
    2013The complex methylome of the human gastric pathogen Helicobacter pyloriNucleic Acids ResearchJuliane Krebes, Richard D. Morgan, Boyke Bunk, Cathrin Spröer, Khai Luong, Raphael Parusel, Brian P. Anton, Christoph König, Christine Josenhans, Jörg Overmann, Richard J. Roberts, Jonas Korlach, Sebastian Suerbaum
    2013The Evolution of Genes: the Chicken Preproinsulin GeneCellPerler, F.B.and Efstratiadis, A.
    2013The First Identification and Retrospective Study of Severe Fever With Thrombocytopenia Syndrome in JapanThe Journal of Infectious DiseasesToru Takahashi, Ken Maeda, Tadaki Suzuki, Aki Ishido, Toru Shigeoka, Takayuki Tominaga, Toshiaki Kamei, Masahiro Honda, Daisuke Ninomiya, Takenori Sakai, Takanori Senba, Shozo Kaneyuki, Shota Sakaguchi, Akira Satoh, Takanori Hosokawa, Yojiro Kawabe, Shintaro Kurihara, Koichi Izumikawa, Shigeru Kohno, Taichi Azuma, Koichiro Suemori, Masaki Yasukawa, Tetsuya Mizutani, Tsutomu Omatsu, Yukie Katayama, Masaharu Miyahara, Masahito Ijuin, Kazuko Doi, Masaru Okuda, Kazunori Umeki, Tomoya Saito, Kazuko Fukushima, Kensuke Nakajima, Tomoki Yoshikawa, Hideki Tani, Shuetsu Fukushi, Aiko Fukuma, Momoko Ogata, Masayuki Shimojima, Noriko Nakajima, Noriyo Nagata, Harutaka Katano, Hitomi Fukumoto, Yuko Sato, Hideki Hasegawa, Takuya Yamagishi, Kazunori Oishi, Ichiro Kurane, Shigeru Morikawa, Masayuki Saijo
    2013The Formin Daam1 and Fascin Directly Collaborate to Promote Filopodia FormationCurrent Biology Jaiswal, R., Breitsprecher, D., Collins, A., Correa, I.R., Jr., Xu, M.-Q. and Goode, B.L.
    2013The genetic code constrains yet facilitates Darwinian evolutionNucleic Acids ResFirnberg E, Ostermeier M
    2013The Molecular Biology, Immunology and Chemotherapy of Wolbachia Bacterial Endosymbionts of Filarial NematodesParasitic Namatodes: Molecular Biology, Biochemistry, Immunology Foster, J.M., Hoerauf, A., Slatko, B.E. and Taylor, M.J.
    2013The oil palm SHELL gene controls oil yield and encodes a homologue of SEEDSTICKNatureSingh R, Low ET, Ooi LC, Ong-Abdullah M, Ting NC, Nagappan J, Nookiah R, Amiruddin MD, Rosli R, Manaf MA, Chan KL, Halim MA, Azizi N, Lakey N, Smith SW, Budiman MA, Hogan M, Bacher B, Van Brunt A, Wang C, Ordway JM, Sambanthamurthi R, Martienssen RAGibson Assembly®
    2013The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosomeScienceEngreitz JM, Pandya-Jones A, McDonel P, Shishkin A, Sirokman K, Surka C, Kadri S, Xing J, Goren A, Lander ES, Plath K, and Guttman M
    2013Two new restriction endonucleases from Proteus vulgaris.Nucl.Acids Res.Gingeras, T.R., Greenough, L., Schildkraut, I., and Roberts, R.J.
    2013VectorsBrenner's Encyclopedia of GeneticsAnton, B.P.
    2013Decreased vancomycin susceptibility in Staphylococcus aureus caused by IS256 tempering of WalKR expressionAntimicrob Agents ChemotherMcEvoy CR, Tsuji B, Gao W, Seemann T, Porter JL, Doig K, Ngo D, Howden BP, Stinear TP
    2013Abortive TransductionBrenner's Encyclopedia of GeneticsRaleigh, E.A.
    2013Massively parallel characterization of restriction endonucleasesScopusKamps-Hughes, N., Quimby, A., Zhu, Z., Johnson, E.A.
    2013The role of the methyltransferase domain of bifunctional restriction enzyme RM.BpuSI in cleavage activityPLOS ONE Sarrade-Loucheur, A., Xu, S-Y. and Chan, S-H.
    2013Three-color single molecule imaging shows WASP detachment from Arp2/3 complex triggers actin filament branch formation eLifeBenjamin A Smith, Shae B Padrick, Lynda K Doolittle, Karen Daugherty-Clarke, Ivan R Corrêa Jr, Ming-Qun Xu, Bruce L Goode3, Michael K Rosen, Jeff Gelles
    2013The COMBREX project design methodology and initial resultsPLOS ONE Anton BP, Chang YC, Brown P, Choi HP, Faller LL, Guleria J, Hu Z, Klitgord N, Levy-Moonshine A, Maksad A, Mazumdar V, McGettrick M, Osmani L,Pokrzywa R, Rachlin J, Swaminathan R, Allen B, Housman G, Monahan C, Rochussen K, Tao K, Bhagwat AS, Brenner SE, Columbus L, de Crécy-Lagard V, Ferguson D, Fomenkov A, Gadda G, Morgan RD, Osterman AL, Rodionov DA, Rodionova IA, Rudd KE, Söll D, Spain J, Xu SY, Bateman A,Blumenthal RM, Bollinger JM, Chang WS, Ferrer M, Friedberg I, Galperin MY, Gobeill J, Haft D, Hunt J, Karp P, Klimke W, Krebs C, Macelis D, Madupu R, Martin MJ, Miller JH, O'Donovan C, Palsson B, Ruch P, Setterdahl A, Sutton G, Tate J, Yakunin A, Tchigvintsev D, Plata G, Hu J, Greiner R, Horn D,Sjölander K, Salzberg SL, Vitkup D, Letovsky S, Segrè D, DeLisi C, Roberts RJ, Steffen M, Kasif S.
    2013DNMT1-interacting RNAs block gene-specific DNA methylationNatureAnnalisa Di Ruscio, Alexander K. Ebralidze, Touati Benoukraf, Giovanni Amabile, Loyal A. Goff, Jolyon Terragni, Maria Eugenia Figueroa, Lorena Lobo De Figueiredo Pontes, Meritxell Alberich-Jorda, Konstantin K. Ebralidze, Sriharsa Pradhan, John L. Rinn, Daniel G. Tenen
    2013Efficient and specific gene knockdown by small interfering RNAs produced in bacteriaNat Biotechnol.Huang, L., Jin, J., Deighan, P., Liner, E., McReynolds, L. and Lieberman, J.
    2013A Method for Selectively Enriching Microbial DNA from Contaminating Vertebrate Host DNAPLOS ONEGeorge R. Feehery, Erbay Yigit, Samuel O. Oyola, Bradley W. LanghorstVictor T. Schmidt, Fiona J. Stewart, Eileen T. Dimalanta, Linda A. Amaral-Zettler, Theodore Davis, Michael A. Quail, Sriharsa Pradhan
    2013High-resolution enzymatic mapping of genomic 5-hydroxymethylcytosine in mouse embryonic stem cellsCell RepSun Z, Terragni J, Borgaro JG, Liu Y, Yu L, Guan S, Wang H, Sun D, Cheng X, Zhu Z, Pradhan S, Zheng Y
    2013Highlights of the DNA cutters: a short history of the restriction enzymesNucleic Acids ResearchWil A. M. Loenen, David T. F. Dryden, Elisabeth A. Raleigh, Geoffrey G. Wilson, and Noreen E. Murray
    2013Natural Zinc Ribbon HNH Endonucleases and Engineered Zinc Finger Nicking EndonucleaseNucl Acids Res.Xu, S.-Y. and Gupta, Y.K.
    2013Evaluation of UDP-GlcN Derivatives for Selective Labeling of 5-(Hydroxymethyl)cytosineChembiochemDai N, Bitinaite J, Chin HG, Pradhan S, Corrêa IR Jr.
    2012Antiproliferative small-molecule inhibitors of transcription factor LSF reveal oncogene addiction to LSF in hepatocellular carcinomaProc Natl Acad Sci. USAGrant, T.J., Bishop, J.A., Christadore, L.M., Barot, G., Chin, H.G., Woodson, S., Kavouris, J., Siddiq, A., Gredler, R., Shen, X.N., Sherman, J., Meehan, T., Fitzgerald, K., Pradhan, S., Briggs, L.A., Andrews, W.H., Sarkar, D., Schaus, S.E. and Hansen, U.
    2012Antiproliferative small-molecule inhibitors of transcription factor LSF reveal oncogene addiction to LSF in hepatocellular carcinomaProc. Natl. Acad. Sci. USAGrant, T.J., et al.
    2012Biochemical characterization of recombinant beta-glucosyltransferase and analysis of global 5-hycroxymethylcytosine in unique genomesBiochemistryTerragni, J., Bitinaite, J., Zheng, Y. and Pradhan, S.
    2012Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencingNucl. Acids Res.Clark, T.A., Murray, I.A., Morgan, R.D., Kislyuk, A.O., Spittle, K.E., Boitano, M., Fomenkov, A., Roberts, R.J. and Korlach, J.
    2012Characterization of transcription factors that regulate the Type IV secretion system and riboflavin biosynthesis in Wolbachia of Brugia malayiPLOS OneLi, Liz and Carlow, C.
    2012Characterization of Transcription Factors That Regulate the Type IV Secretion System and Riboflavin Biosynthesis in Wolbachia and Brugia malayiPLoS OneZhiru, Li and Carlow, C.K.S.