Publications

Publications

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YearTitleJournalAuthorsApplication(s)
1987Enhancement of the apparent cleavage specificities of restriction endonucleases: applications to megabase mapping of chromosomes.McClelland, M., and Nelson, M.
1993Crystal Structure of the HhaI DNA Methyltransferase.Cheng, X., Kumar, S., Klimasauskas, S., and Roberts, R.J.
1993Workshop of DNA Probes and PCR for Detection of Filarial Parasies in VectorsWilliams, S.A.
2001Molecular Biology Problem Solver: A Laboratory GuideBonventre, J., Walsh, P.and Robinson, D.
2008Expression and purification of BmrI restriction endonucleases and its N-terminal cleavage domain variantsBao, Y., Higgins, Zhang, P., Chan, S.H., Lagaet, S., Sweeney, S., Lunnen, K., Xu, S.Y.
2010Lipoprotein biosynthesis as a target for anti-Wolbachia treatment of filarial nematodes.Johnston, K.L., Wu, B., Guimaraes, A., Ford, L.Slatko, B.E.and Taylor, M.J.
2010Unusual target site disruption by the rare-cutting HNH restriction endonuclease PacI.StructureShen, B.W., Heiter, D.F., Chan, S.H., Wang, H., Xu, S.Y., Morgan, R.D., Wilson, G.G.and Stoddard, B.L.
20116-Thioguanine reactivates epigenetically silenced genes in acute lymphoblastic leukemia cells by facilitating proteasome-mediated degradation of DNMT1Canc. Res.
2011Activity, specificity and structure of I-Bth03051: a representative of a new homing endonuclease familyTaylor, G.K., Heiter, D.F., Pietrokovski, S. and Stoddard, B.L.
2011Branched Intermediate Formation is the Slowest Step in th Protein Splicing Reaction of the Ala1 KbA Intein from Methanococcus jannaschiiSaleh, L., Southworth, M.W., Considine, N., O'Neill, C., Benner, J., Bollinger, J.M. and Perler, F.B.
2011Next-gen expression systemsRitter, A.
2012Metagenome Projects (To be published as part of a proceedings volume based upon a presentation as presented at the VI Congreso Nicaraguense de Biotecnologia.)Slatko, B.
2012SHuffle, a novel Escherichia coli protein expression strain capable of correctly folding disulfide bonded proteins in its cytoplasmLobstein, J., Emrich, C.A., Jeans, C., Faulkner, M., Riggs, P. and Berkmen, M.
2013Quantifying Elongation Rhythm during Full-Length Protein SynthesisRosenblum G, Chen C, Kaur J, Cui X, Zhang H, Asahara H, Chong S, Smilansky Z, Goldman YE, Cooperman BS.
2014Evaluation of fluorophores to label SNAP-tag fused proteins for multicolor single-molecule tracking microscopy in live cellsBosch PJ, Corrêa IR Jr, Sonntag MH, Ibach J, Brunsveld L, Kanger JS, Subramaniam V
2015Ten simple rules to win a nobel prizeRoberts, R.J.
2015The mRNA decay factor PAT1 functions in a pathway including MAP kinase 4 and immune receptor SUMM2Roux, M.E., Rasmussen, M.W., Palma, K., Lolle, S., Regue, A.M., Bethke, G., Glazebrook, J., Zhang, W., Sieburth, L., Larsen, M.R., Mundy, J., Petersen, M.
2016Comprehensive Profiling of Glycosphingolipid Glycans Using a Novel Broad Specificity Endoglycoceramidase in a High-Throughput Workflow.Albrecht, S., Vainauskas, S., Stöckmann, H., McManus, C., Taron, C.H. and Rudd, P.M.
2017A practical guide to the oral microbiome and its relation to health and diseaseKrishnan, K., Chen, T., Paster, B.J.
2017Complete genome sequence and methylome analysis of Acinetobacter calcoaceticus 65Fomenkov, A., Vincze, T., Degtyarev, S.K., Roberts, R.J.
2017Dynamics of 5-carboxylcytosine during hepatic differentiation: potential general role for active demethylation by DNA repair in lineage specificationLewis, L.C., Lo, P.C., Foster, J.M., Dai, N., Correa, I.R., Jr., Durczak, P.M., Duncan, G., Ramsawhook, A., Aithal, G.P., Denning, C., Hannan, N.R., Ruzov, A.
"Bacterial Systems" introduction of Membrane Proteins - Strategies for Expression and IsolationSamuelson, J.C.
Culture-independent genomic characterisation of Candidatus Chlamydia
Efficient DNA ligation in DNA-RNA hybrid helices by Chlorella
Production of disulfide-bonded proteins in Escherichia coliBerkmen, M.
2006Heterologous protein production in the yeast Kluyveromyces lactis FEMS Yeast Res.Van Ooyen, A.J.J., Dekker, P., Huang, M., Olsthoorn, M.M.A., Jacobs, D.I., Colussi P.A., and Taron, C.H.
2016Complete Genome Sequence of the Engineered Escherichia coli SHuffle Strains and Their Wild-Type Parents Genome Announc.Anton, B.P., Fomenkov, A., Raleigh, E.A. and Berkmen, M.
2012Clathrin promotes centrosome integrity in early mitosis through stabilization of centrosomal ch-TOG J Cell Bio.Foraker, A.B., Camus, S.M., Evans, T.M., Majeed, S.R., Chen, C.-Y., Taner, S.B., Correa, I.R. Jr., Doxsey, S.J. and Brodsky, F.M.
2008Crucial role of aspartic acid at position 265 in the CH2 domain for murine IgG2a and IgG2b Fc-associated effector functions J Immunol. Baudino L, Shinohara Y, Nimmerjahn F, Furukawa J, Nakata M, Martínez-Soria E, Petry F, Ravetch JV, Nishimura S, Izui S.
2012Structural insights into the assembly and shape of Type III restriction-modification (R-M) EcoP15I complex by small-angle X-ray scattering J Mol biol. Gupta, Y.K., Yang, L., Chan, S.H., Samuelson, J.C., Xu, S.-Y. and Aggarwal, A.K.
2011Characterization of Type II and III restriction modification systems from Bacillus cereus strains J. Bacteriol.Xu, S.Y., Nugent, R.L., Kasamkattil, J., Fomenkov, A., Gupta, Y., Aggarwal, A., Wang, X., Li, Z., Zheng, Y. and Morgan, R.
2012Reconstitution of translation from Thermus thermophilus reveals a minimal set of components sufficient for protein synthesis at high temperatures and functional conservation of modern and ancient translation components Nucleic Acids Res.Zhou, Y., Asahara, H. and Chong, S.
2012Substrate cooperativity in marine luciferases PLoS OneTzertzinis, G., Schildkraut, E. and Schildkraut, I.
2005Alternative luciferase for monitoring bacterial cells under adverse conditions Appl. Environ. Microbiol. Wiles, S., Ferguson, K., Stefanidou, M., Young, D.B. and Robertson, B.D.
2007Dual-reporter assay using two secreted luciferase genes Biotechniques Wu, C., Suzuki-Ogoh, C. and Ohmiya, Y.
2009Prion protein glycosylation is not required for strain-specific neurotropism J Virol.  Piro, J.R., Harris, B.T., Nishina, K., Soto, C., Morales, R., Rees, J.R., Supattapone, S.
2010Organelle-targetable fluorescent probes for imaging hydrogen peroxide in living cells via SNAP-tag protein labeling  J. Am. Chem. Soc. Srikun, D. et al.
2008 Ribosomal Synthesis of N-Methyl Peptides  J. Am. Chem. Soc. Subtelny. A. O.,Hartman, M. C. T., and Szostak, J. W.
2010The nucleoporin Nup188 controls passage of membrane proteins across the nuclear pore complex J. Cell Biol.  Theerthagiri, G., Eisenhardt, N., Schwarz, H. and Antonin, W.
2007Propagation of centromeric chromatin requires exit from mitosis J. of Cell Bio. Jansen L. et al
2007Sialic acid on herpes simplex virus type 1 envelope glycoproteins is required for efficient infection of cells J. Virol. Teuton, J.R., Brandt, C.R.
2008Templated protein assembly on micro-contact-printed surface patterns. Use of the SNAP-tag protein functionality LangumuirIversen L. et al.
2010Revolutionizing membrane protein overexpression in bacteria Micro. Biotech. Schlegel, S., Klepsch, M., Gialama, D., Wickström, D., Slotboom, D.J. and de Gier, J.
2007An improved and secreted luciferase reporter for schistosomes  Mol. Biochem. Parasitol. Cheng, G. and Davis, R.E.
2008Molecular Mechanism of Drug-Dependent Ribosome Stalling  Mol. Cell. Vazquez-Laslop, N., Thum, C., and Mankin, A.S.
2007Fusion of Gaussia luciferase to an engineered anti-carcinoembryonic antigen (CEA) antibody for in vivo optical imaging  Mol. Imaging Biol. Venisnik, K.M., Olafsen, T., Gambhir, S.S. and Wu, A.M
2011A piggyBac transposon-based mutagenesis system for the fission yeast Schizosaccharomyces pombe  Nuc. Acids Res. Li, J., Zhang, J.-M., Li, X. et al
2009 The Krüppel-like zinc finger protein Glis3 directly and indirectly activates insulin gene transcription  Nucleic Acids Res. adr, C.E., Hewett, J.W., Breakefield, X.O. and Tannous, B.A.
2007A Concise Synthesis of the Pennsylvania green fluorophore and labeling of intracellular targets with O6-Benzylguanine Derivatives Org. Lett. Mottram L. F. et al.
2007A highly sensitive assay for monitoring the secretory pathway and ER stress PLoS One Badr, C.E., Hewett, J.W., Breakefield, X.O. and Tannous, B.A.
2006 Self-assembling protein arrays on DNA chips by auto-labeling fusion proteins with a single DNA address Proteomics Jongsma M.A., Litjens R. H.
1996Potent Inhibition Of T7 Rna-Polymerase With A Truncated T7 Promoter.Abstracts Of Papers Of The American Chemical SocietyNoren, C.J., and Moreira, R.F.
1996Teaching About ScienceAccountability in ResearchRoberts, R.J.
2006Evolving the substrate specificity of O6 alkylguanine DNA alkyltransferase through loop insertion for applications in molecular imagingACS Chem Biol. Heinis C. et al.
2007Chemical tools for biomolecular imagingACS Chem. Biol. Johnsson N. and Johnsson K.
2009Chromophore-assisted laser inactivation of α- and γ-tubulin SNAP-tag fusion proteins inside living cellsACS Chem. Biol. Keppler A. et al.
2008Ribosomal Synthesis of Peptidase-Resistant Peptides Closed by a Nonreducible Inter-Side-Chain BondACS Chem. Biol.  Sako, Y., Goto, Y., Murakami, H., and Suga, H.
2010Photoactivatable and photoconvertible fluorescent probes for protein labelingACS Chem. Biol. Asap Maurel D. et al.
2007Genetically encoded short peptide tags for orthogonal protein labeling by Sfp and AcpS phosphopantetheinyl transferasesACS Chemical Biology Zhou Z. et al.
2016Simple Isothermal Strategy for Multiplexed, Rapid, Sensitive, and Accurate miRNA DetectionACS SensWee E J H, Trau M,
2002Cloning, Expression and Immunization of the new antigen gene Sj-Ts4 of Schistosoma japonicum.Acta Biochimica et Biophysica Sinica Zhou, D.-M., Yi, X.-Y., Zeng, X.-F., Wang, M., Cai, C., Wang, Q.-L., Zhang, S.-K., McReynolds, L.
2003Crystallization of restriction endonuclease SfiI in complex with DNAActa Crystallogr. D Biol. Crystallogr.Viadiu, H., Vanamee, E.S., Jacobson, E.M., Schildkraut, I. and Aggarawl, A.K.
1999Crystallization and preliminary diffractin analysis of the HincII restriction endonuclease-DNA complex.Acta Crystallogr.D.Biol.Crystallogr.Horton, N.C, Dorner, L.F., Schildkraut, I.and Perona J.J.
1999Purification and crystallization of precursors and autoprocessed enzymes of Flavobacterium glycosylasparaginase: an N-terminal nucleophile hydrolase.Acta Crystallogr.D.Biol.Crystallogr.Cui, T., Liao, P.H., Guan, C.and Guo, H.C.
2000Crystallization and preliminary X-ray diffraction analysis of MspI restriction endonuclease in complex with its cognate DNA.Acta Crystallogr.D.Biol.Crystallogr.O'Loughlin, T.J., Xu, Q., Kucera, R.B., Dorner, L.F., Sweeney, S., Schildkraut, I.and Guo, H.-C.
2002Crystallographic study of a naturally occurring trans-splicing intein from Synechocystis sp.PCC 6803.Acta Crystallogr.D.Biol.Crystallogr.Chen, X., Xu, M.-Q., Ding, Y., Ferrandon, S.and Rao, Z.
2002Purification and initial crystallization studies of a DnaB intein from Synechocystis sp.PCC 6803.Acta Crystallogr.D.Biol.Crystallogr.Chen, X., Xu, M.-Q., Ding, Y., Ferrandon, S.and Rao, Z.
2011Crystallization and preliminary crystallographic analysis of the Type IIL restriction enzyme MmeI in complex with DNA.Acta Crystallogr.F.Structural biology and crystallization communications Callahan, S.J., Morgan, R.D., Jain, R., Townson, S.A., Wilson, G.,G.Roberts, R.J.and Aggarwal, A.K.
2011New Clues in the Allosteric Activation of DNA Cleavage by SgrAI; Structures of SgrAI Bound to Cleaved Primary Site DNA and Uncleaved Secondary Site DNA.Acta Crystallogr.F.Structural biology and crystallization communications Little, E.J., Dunten, P.W., Bitinaite, J.and Horton, N.C.
1993Restriction enzymes from Campylobacter coli strains.Acta gastroenterol.belg.Vitor, J.M.B., Polisson, C., Cabrita, J., and Silva, R.V.C.
1990Anti-idiotypic antibodies function as a surrogate surface epitope of Brugia malayi infective larvae.Acta Trop.Carlow, C.K.S., Busto, P., Storey, N., and Philipp, M.
2013Ten eleven translocation enzymes and 5-hydroxymethylation in mammalian development and cancerAdv Exp Med BiolKinney, S.R. and Pradhan, S.
2009Protein Splicing: A Versatile Tool for Drug Discovery.Adv.Drug Deliv.Rev.Cheriyan, M.and Perler, F.B.
2005Automated isolation techniques for microalgae, pgs.101-116 in "Algal culturing techniques"Algal culturing techniquesSieracki, M., Poulton, N., Crosbie, N.
1993A sensitive serodiagnostic test for onchocerciasis using a cocktail of recombinant antigens.Am J Trop Med Hyg.Bradley, J.E., Trenholme, K.R., Gillespie, A.J., Guderian, R., Titanji, V., Hong, Y., and McReynolds, L.
2010Biodiversity assessment: State-of-the-art techniques in phylogenomics and species identification Am. J. Bot. Steele, P.R and Pires, J.C.
2010Massively parallel sequencing of exons on the X chromosome identifies RBM10 as the gene that causes a syndromic form of cleft palate Am. J. Hum. Genet. Johnston, J.J., Teer, J.K., Cherukuri, P.F. et al
2007Cellular trafficking of phospholamban and formation of functional sarcoplasmic reticulum during myocyte differentiationAm. J. Physiol. Cell Physiol.  Stenoien D. L. et al.
2006Deglycosylation of the beta1-subunit of the BK channel changes its biophysical propertiesAm. J. Physiol.Cell. Physiol.  Hagen, B.M., Sanders, K.M.
2008Tasting Phenylthiocarbamide (PTC): A New Lab With an Old Flavor.Am.Biol.TeacherMerritt, R., Bierwort, L., Slatko, B., Weiner, M., Weiner, E., Ingram, J.and Sciarra, K.
2007Tasting Phenylthiocarbamide (PTC): A New Lab With an Old Flavor.Am.Biol.Teacher Merritt, R., Bierwort, L., Slatko, B., Weiner, M., Weiner, E., Ingram, J.and Sciarra, K.
1987Protective immunity to Brugia malayi larvae in BALB/c mice: potential of this model for the identification of protective antigens.Am.J.Trop.Med.Hyg.Carlow, C.K.S., and Philipp, M.
1995Differential recognition of microfilarial chitinase, a transmission-blocking vaccine candidate antigen, by sera from patients with Brigian and Bancroftian filariasis.Am.J.Trop.Med.Hyg.Dissanayake, S., Perler, F.B., Xu, M., Southworth, M.W., Yee, C.K., Wang, S., Dreyer, G., Watawana, L., Kurniawan, L., Fuhrman, J.A., and Piessens, W.F.
2014Insights into bacterial CO2 metabolism revealed by the characterization of four carbonic anhydrases in Ralstonia eutropha H16AMB ExpressGai CS, Lu J, Brigham CJ, Bernardi AC, Sinskey AJGibson Assembly®
2015Production of bioactive chicken (Gallus gallus) follistatin-type proteins in E. coliAMB ExpressLee S.B., Park S.K., Kim Y.S.
1992Using Molecular Biological Techniques to Identify and Study Gene Products Involved in Dirofilarial Immunoprophylaxis.American Heartworm SocietyHough, D.M., Awobuluyi, M.E., McReynolds, L.A., Carlow, C.K.S., and Maina, C.V.
1994Restriction and modification. In: Molecular Biology of Bacteriophage T4American Society for Microbiology, Washington, D.C.Carlson, K., Raleigh, E.A. and Hattman, S.
2010Phage display probes for imaging early response to bevacizumab treatmentAmino AcidsCao, Q. et al.Phage Display
2014Identification and characterization of mutant clones with enhanced propagation rates from phage-displayed peptide librariesAnal BiochemNguyen KT, Adamkiewicz MA, Hebert LE, Zygiel EM, Boyle HR, Martone CM, Meléndez-Ríos CB, Noren KA, Noren CJ, Hall MFPhage Display
2014Identification and characterization of mutant clones with enhanced propagation rates from phage-displayed peptide librariesAnal BiochemNguyen KT, Adamkiewicz MA, Hebert LE, Zygiel EM, Boyle HR, Martone CM, Meléndez-Ríos CB, Noren KA, Noren CJ, Hall MF
2007A sensitive fluorescence intensity assay for deubiquitinating proteases using ubiquitin-rhodamine110-glycine as substrateAnal Biochem.Hassiepen, U., et. al.
2002Recombinant Gaussia luciferase. Overexpression, purification and analytical application of a bioluminescent reporter for DNA hybridizationAnal ChemVerhaegen, M., Christopoulos, T.K.
2015Rapid Preparation of Released N-Glycans for HILIC Analysis Using a Labeling Reagent that Facilitates Sensitive Fluorescence and ESI-MS DetectionAnal ChemLauber, M.A., Yu, Y.Q., Brousmiche,D.W., Hua, Z., Koza, S.M., Magnelli, P., Guthrie, E., Taron, C.H. and Fountain, K.J.
2016Simple and Highly Sensitive Molecular Diagnosis of Zika Virus by Lateral Flow Assays.Anal Chem.Lee D, Shin Y, Chung S, Hwang KS, Yoon DS, Lee JH
2002Recombinant Gaussia luciferase. Overexpression, purification, and analytical application of a bioluminescent reporter for DNA hybridization Anal Chem. Verhaegen, M. and Christopoulos, T.K.
2004SPR-based interaction studies with small molecular weight ligands using hAGT fusion proteinsAnal. Biochem. Huber W. et al.
2010Multichannel perfusion culture bioluminescence reporter system for longterm detection in living cells Anal. Biochem. Watanabe, T., Enomoto, T., Takahashi, M., Honma, S., Honma, K. and Ohmiya, Y.
2011Kinetic study of de novo chromophore maturation of fluorescent proteinsAnal. Biochem. Iizuka, R., Yamagishi-Shirasaki, M. and Funatsu, T.
2003Merging fluorescence resonance energy transfer and expressed protein ligation to analyze protein-protein interactionsAnal. Biochem. Scheibner, K.A., Zhang, Z. and Cole, P.A.
2006Fluorescence-mediated analysis of mitochondrial preprotein import in vitroAnal. Biochem.  Krayl M. et al.
2008Spectral resolved gene technology for multiplexed bioluminescence and high content screening Anal. Chem. Michelini, E., Cevenini, L., Mezzanote, L., Ablamsky, D., Southworth, T., Branchini, B. and Roda, A.
2010Functional Immobilization and Patterning of Proteins by an Enzymatic Transfer ReactionAnal. Chem. Waichman S. et al.
2010Localizable and Highly Sensitive Calcium Indicator Based on a BODIPY Fluorophore Anal. Chem. Kamiya M. and Johnsson K.
1998The Maltoxe-Binding Protein as a Scaffold for Monovalent Display of Peptides Derived from Phage Libraries.Anal.Biochem.Zwick, M.B., Bonnycastle, L.L.C., Noren, K.A., Venturini, S., Leong, E., Barbas, C.F., Noren, C.J.and Scott, J.K.
2008A target-unrelated peptide in an M13 phage display library traced to an advantageous mutation in the gene II ribosome-binding site.Anal.Biochem.Brammer, L.A., Bolduc, B., Kass, J.L., Felice, K.M., Noren, C.J.and Hall, M.F.
2008Single-process expression and purification of multiple recombinant protein through cocultivation and affinity purification.Anal.Biochem.Porte, M.and Chong, S.
2008Targeting DNA (5)mCpG sites with chimeric endonucleases.Anal.Biochem.Formenkov, A., Too, P.H., Chan, S.H., Vaisvila, R., Cantin, B.A., Mazzola, L., Tam, V.and Xu, S.Y.
2016Genetically anchored fluorescent probes for subcellular specific imaging of hydrogen sulfide.AnalystChen, J., Zhao, M., Jiang, X., Sizovs, A., Wang, M.C., Provost, C.R., Huang, J. and Wang, J.
2007Inducing and sensing protein-protein interactions in living cells by selective cross-linkingAngew Chem. Int. Ed Lemercier, G. et al.
2009Bioorthogonal Chemistry: Fishing for Selectivity in a Sea of Functionality Angew. Chem. Int. Ed. Sletten E. and Bertozzi C.
2000Dissecting the Chemistry of Protein Splicing and its ApplicationsAngew.Chem.Int.Ed.Noren, C.J., Wang, J.and Perler, F.B.
1994An amazing distortion in DNA induced by a methyltransferase (Nobel lecture)Angew.Chem.Int.Ed.Engl.Roberts, R.J.
1995Photochemically initiated protein splicing.Angew.Chem.Int.Ed.Engl.Cook, S.N., Jack, W.E., Xiong, X., Danley, L.E., Ellman, J.A., Shultz, P.G., and Noren, C.J.
1991Restriction and Modification Systems.Ann.Rev.Genet.Wilson, G.G., and Murray, N.E.
1988IMMUNITY IN FILARIASIS: Perspectives for Vaccine Development.Ann.Rev.Microbiol.Philipp, M., Davis , T.B., Storey, N., and Carlow, C.K.S.
1998Base Flipping.Annual Review Biochem.Roberts, R.J.and Cheng, X.
2014Spontaneous in vitro senescence of glioma cells confirmed by an antibody against IDH1R132HAnticancer ResStoczynska-Fidelus E, Och W, Rieske P, Bienkowski M, Banaszczyk M, Winiecka-Klimek M, Zieba J, Janik K, Rosiak K, Treda C, Stawski R, Radomiak-Zaluska A, Piaskowski S
2013Decreased vancomycin susceptibility in Staphylococcus aureus caused by IS256 tempering of WalKR expressionAntimicrob Agents ChemotherMcEvoy CR, Tsuji B, Gao W, Seemann T, Porter JL, Doig K, Ngo D, Howden BP, Stinear TP
2015Converting a Sulfenic Acid Reductase into a Disulfide Bond IsomeraseAntioxid Redox SignalChatelle C, Kraemer S, Ren G, Chmura H, Marechal N, Boyd D, Roggemans C, Ke N, Riggs P, Bardwell J, Berkmen M
2015Converting a Sulfenic Acid Reductase into a Disulfide Bond IsomeraseAntioxid Redox Signal.Chatelle C, Kraemer S, Ren G, Chmura H, Marechal N, Boyd D, Roggemans C, Ke N, Riggs P, Bardwell J, Berkmen M.
2014Gene and protein sequence optimization for high-level production of fully active and aglycosylated lysostaphin in Pichia pastorisAppl Environ MicrobiolZhao H, Blazanovic K, Choi Y, Bailey-Kellogg C, Griswold KEGlycobiology
2014The CLO3403/CLO3404 Two-Component System of Clostridium botulinum E1 Beluga Is Important for Cold Shock Response and Growth at Low TemperaturesAppl Environ MicrobiolMascher G, Derman Y, Kirk DG, Palonen E, Lindström M, Korkeala H
2015The RpoE Stress Response Pathway Mediates Reduction of the Virulence of Enteropathogenic Escherichia coli by Zinc.Appl Environ MicrobiolYuan Xue, Jossef Osborn, Anand Panchal, Jay L MelliesHigh-Fidelity PCR
2014Establishment of a CpG island microarray for analyses of genome-wide DNA methylation in Chinese hamster ovary cellsAppl Microbiol BiotechnolWippermann A, Klausing S, Rupp O, Albaum SP, Büntemeyer H, Noll T, Hoffrogge R
2006TspMI, a thermostable isoschizomer of XmaI (5'C/CCGGG3'): characterization and single molecule imaging with DNA.Appl Microbiol.Biotechnol.Parashar, V., Capalash, N., Xu, S.Y., Sako, Y.and Sharma, P.
2010Mutations in maltose-binding protein that alter affinity and solubility properties.Appl Microbiol.Biotechnol.Walker, I.H., Hsieh, P.C.and Riggs, P.D.
2005Alternative luciferase for monitoring bacterial cells under adverse conditions.Appl. Environ. Microbiol.Wiles, S., Ferguson, K., Stefanidou, M., Young, D.B. and Robertson, B.D.
2005Characterization of a nucleus-encoded chitinase from the yeast Kluyveromyces lactisAppl. Environ. Microbiol.Colussi, P.A., Specht, C.A. and Taron, C.H.
2005Kluyveromyces lactis LAC4 promoter variants that lack function in bacteria but retain full function in K. lactisAppl. Environ. Microbiol.Colussi, P.A. and Taron, C.H.
2007Acetamide selection of Kluyveromyces lactis cells transformed with an integrative vector leads to high frequency formation of multicopy strainsAppl. Environ. Microbiol.Read, J.D., Colussi, P.A., Ganatra, M.B. and Taron, C.H.
2011Engineering BL21(DE3) derivative strains to minimize Escherichia coli protein contamination after IMAC purification.Appl. Environ. Microbiol.Robichon, C., Luo, J., Causey, T.B., Benner, J.S. and Samuelson, J.C.
2015Transcriptional Analysis of Deinococcus radiodurans Reveals Novel Small RNAs That Are Differentially Expressed under Ionizing Radiation.Appl. Environ. Microbiol.Tsai, H.C. et al
2010Comparative genomic hybridization of Bifidobacterium longum strains reveals broad conservation of milk utilization genes in subsp. infantisAppl. Environ. Microbiol. LoCascio, R.G., Desai, P., Sela, D.A., Weimer, B., and Mills, D.A.
2007Engineering of the yeast Yarrowia lipolytica for the production of glycoproteins lacking the outer-chain mannose residues of N-glycansAppl. Environ. Microbiol.  Song, Y., Choi, M.H., Park, J.N., Kim, M.W., Kim, E.J., Kang, H.A., Kim, J.Y.
2008Purification of green fluorescent protein using a two-intein systemAppl. Microbiol. Biotechnol.Zhao, Z., et. al.
2011Heterologous expression of a thermophilic esterase in Kluyveromyces yeastsAppl. Microbiol. Biotechnol.Rocha S.N., et al.
1998Characterization of an Extremely Thermostable Restriction Enzyme, PspGI, from a Pyrococcus Strain and Cloning of the PspGI Restriction-Modification System in Escherichia coli.Appl.Environ.Microbiol.Morgan, R., Xiao, J.P.and Xu, S.Y.
2001Protein trans-Splicing To Produce Herbicide-Resistant Acetolactate Synthase.Appl.Environ.Microbiol.Sun, L., Ghosh, I., Paulus, H.and Xu, M.Q.
2004A bacteriophage-based genetic system for selection of non-splicing inteins.Appl.Environ.Microbiol.Cann, I.K.O., Amaya, K.R., Southworth, M.W.and Perler, F.B.
2005Characterization of a Nucleus-Encoded Chitinase from the Yeast Kluyveromyces lactis.Appl.Environ.Microbiol.Colussi, P.A., Specht, C.A.and Taron, C.H.
2005Kluyveromyces lactis LAC4 Promoter Variants That Lack Function in Bacteria but Retain Full Function in K.lactis.Appl.Environ.Microbiol.Colussi, P.A.and Taron, C.H.
2007Acetamide Selection of Kluyveromyces lactis Cells Transformed with an Integrative Vector Leads to High Frequency Formation of Multicopy Strains.Appl.Environ.Microbiol.Read, J.D., Colussi, P.A., Ganatra, M.B.and Taron, C.H.
2011Engineering BL21(DE3) derivative strains to minimize Escherichia coli protein contamination after IMAC purification.Appl.Environ.Microbiol.Robichon, C., Luo, J., Causey, T.B., Benner, J.S.and Samuelson, J.C.
2011Recombination in Wolbachia endosymbionts of filarial nematodies?Appl.Environ.Microbiol.Foster, J., Slatko, B., Bandi, C.and Kumar, S.
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2013Two new restriction endonucleases from Proteus vulgaris.Nucl.Acids Res.Gingeras, T.R., Greenough, L., Schildkraut, I., and Roberts, R.J.
1984A type II restriction endonuclease with an eight nucleotide specificity from Streptomyces fimbriatus.Nucl.Acids.Res.Qiang, B.Q., and Schildkraut, I.
1994Direct selection of binding proficient/catalytic deficient variants of BamHI endonuclease.Nucl.Acids.Res.Dorner, L.F., and Schildkraut, I.
1994REBASE - restriction enzymes and methylasesNucl.Acids.Res.Roberts, R.J.and Macelis, D.
2002Efficient isolation of targeted Caenorhabditis elegans deletion strains using highly thermostable restriction endonucleases and PCR.Nucl.Acids.Res.Wei, A., Yuan, A., Fawcett, G., Butler, A., Davis, T., Xu, S.Y.and Salkoff, L.
2005REBASE - restriction enzymes and DNA methyltransferases.Nucl.Acids.Res.Roberts, R.J., Vincze, T., Posfai, J.and Macelis, D.
2005Structure of HinP1I endonuclease reveals a striking similarity to the monomeric restriction enzyme MspI.Nucl.Acids.Res.Yang, Z., Horton, J.R., Maunus, R., Wilson, G.G., Roberts, R.R.and Cheng, X.
2006DNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion.Nucl.Acids.Res.Horton, J.R., Zhang, X., Maunus, R., Yang, Z., Wilson, G.G., Roberts, R.J.and Cheng, X.
2006Simultaneous amplification and screening of whole plasmids using the T7 bacteriophage replisome.Nucl.Acids.Res.Xu, Y., Kim, H-J., Kays, A., Rice, J.and Kong, H.
2007Automethylation of G9a and its implication in wider substrate specificity and HP1 binding.Nucl.Acids.Res.Chin, H.G., Esteve, P.O., Pradhan, M., Benner, J., Patnaik, D., Carey, M.F., and Pradhan, S.
2007Catalytic domain of restriction endonuclease BmrI as a cleavage module for engineering endonucleases with novel substrate specificities.Nucl.Acids.Res.Chan, S-H, Boa, Y., Ciszak, E., Laget, S.and Xu, S-Y.
2007Discovery of natural nicking endonucleases Nb.BsrDI and Nb.BtsI and engineering of top-strand nicking variants from BsrDI and BtsI.Nucl.Acids.Res.Xu, S.Y.,  Zhu, Z., Zhang, P., Chan, S.H., Samuelson, J., Xiao, J., Ingalls D.and Wilson, G.
2007Selection of restriction endonucleases using artificial cells.Nucl.Acids.Res.Zheng, Y.and Roberts, R.
2007USER friendly DNA engineering and cloning method by uracil excisionNucl.Acids.Res.Bitinaite, J., Rubino, M., Varma, K.H., Schildkraut, I., Vaisvila, R.and Vaiskunaite, R.
2008MmeI: a minimal Type II restriction-modification system that only modifies one DNA strand for host protection.Nucl.Acids.Res.Morgan, R.D.,  Bhatia, T.K., Lovasco, L.and Davis, T.B.
2008The fidelity Index provides a systematic quantitation of star activity of DNA restriction endonucleases.Nucl.Acids.Res.Wei, H., Therrien, C., Blanchard, A., Guan, S.and Zhu, Z.
2008The structure of SgrAI bound to DNA; recognition of an 8 base pair target.Nucl.Acids.Res.Dunten, P.W., Little, E.J., Gregory, M.T., Manohar, V.M., Dalton, M., Hough, D., Bitinaite, J., Horton, N.C.
2009Rational Engineering of Type II Restriction Endonuclease DNA Binding and Cleavage Specificity.Nucl.Acids.Res.Morgan, R.D.and Luyten, Y.A.