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    2011Disruption of PMR1 in Kluyveromyces lactis improves secretion of calf prochymosinJ. Sci. Food Agric.Feng, Z., et al.
    2008Disruption of the OCH1 and MNN1 genes decrease N-glycosylation on glycoprotein expressed inKluyveromyces lactisJ. Biotechnol. Liu, B., Gong, X., Chang, S., Yang, Y., Song, M., Duan, D., Wang, L., Ma, Q., and Wu, J.
    1995Disruption of the target G-C base-pair by the HhaI methyltransferase.GeneKlimasauskas, S., and Roberts, R.J.
    2000Dissecting the Chemistry of Protein Splicing and its ApplicationsAngew.Chem.Int.Ed.Noren, C.J., Wang, J.and Perler, F.B.
    2015Dissecting the molecular properties of prokaryotic flotillinsPLoS OneJuri Nio Bach, Marc BramkampSNAP Surface, SNAP Cell
    2007Distribution plasticity of the human estrogen receptor alpha in live cells: distinct imaging of consecutively expressed receptorsJ. Mol. Biol. Pick H. et al.
    2012Disulfide-bonded protein expression in E. coliGenetic Engineering & Biotechnology NewsSamuelson, J.C., Causey, T.B., and Berkmen, M.
    2007Diversifying selection and host adaptation in two endosymbiont genomes.BMC Evolutionary BiologyBrownlie, J.C., Adamski, M., Slatko, B.and McGraw, E.A.
    2014Diversity and Expression of MicroRNAs in the Filarial Parasite, Brugia malayi.PLoS OnePoole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA.
    2005DNA -binding activity of LndI protein and temporal expression of the gene that upregulates landomycin E production in Streptomyces globisporus 1912Microbiology Rebets, Y., et al.
    2002DNA Binding and Recognition by the IIs Restriction Endonuclease MboII.J.Biol.Chem.Soundararajan, M., Chang, Z., Morgan, R.D., Heslop, P.and Connolly, B.A.
    2009DNA Cloning and Engineering by Uracil Excision.Curr.Protoc.Mol.Biol.Bitinaite, J.and Nichols, N.M.
    1997DNA containing 4'-thio-2' deoxycytidine inhibits methylation by HhaI methyltransferase.Nucl.Acids Res.Kumar, S., Horton, J.R., Jones, G.D., Walker, R.T., Roberts, R.J., and Cheng, X.
    2008DNA damage in preserved specimens and tissue samples: a molecular assessment.Frontiers in Zoology Zimmermann, J., Hajibabaei, M., Blackburn, D.C., Hanken, J., Cantin, E., Posfai, J.and Evans, T.C.
    2006DNA Damage-induced Down-regulation of Human Cdc25C and Cdc2 is Mediated by Cooperation between p53 and Maintenance DNA (Cytosine 5) Methyltransferase 1.J Biol Chem.Le Gac, G., Esteve, P., Ferec, C.and Pradhan, S.
    2008DNA distortion and specificity in a sequence-specific endonuclease.J.Mol.Biol.Babic, A.C., Little, E.J., Manohar, V.M., Bitinaite, J., Horton, N.C.
    1984DNA modification methylases: New uses in the manipulation of DNA.BioTechniquesChrist, C., and Nelson, M.
    2006DNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion.Nucl.Acids.Res.Horton, J.R., Zhang, X., Maunus, R., Yang, Z., Wilson, G.G., Roberts, R.J.and Cheng, X.
    2008DNA Repair Enzymes.Curr.Protoc.Mol.Biol.Evans, T.C., Jr.and Nichols, N.M.
    2003DNA -repair protein hHR23a alters its protein structure upon binding proteasomal subunit S5aProc. Natl. Acad. Sci. USA Walters, K.J., et al.
    1994DNA sequencingCurr.Protoc.Mol.Biol.Slatko, B., Heinrich, P., Nixon, B.T., Eckert, R.L., Albright, L., and Ausubel, F.
    2013DNMT1-interacting RNAs block gene-specific DNA methylationNatureAnnalisa Di Ruscio, Alexander K. Ebralidze, Touati Benoukraf, Giovanni Amabile, Loyal A. Goff, Jolyon Terragni, Maria Eugenia Figueroa, Lorena Lobo De Figueiredo Pontes, Meritxell Alberich-Jorda, Konstantin K. Ebralidze, Sriharsa Pradhan, John L. Rinn, Daniel G. Tenen
    1998Does Bcg1, a Unique Restriction Endonuclease, Require Two Recognition Sites for Cleavage?J Biol.Chem Kong, H., and Smith, C.L.
    2010D-peptide inhibitors of the p53-MDM2 interaction for targeted molecular therapy of malignant neoplasmsProc. Natl. Acad. Sci.Liu, M. et al.
    2007Draft Genome of the Filarial Parasite Brugia malayi.ScienceGhedin E, Wang S, Spiro D, Caler E, Zhao Q, Crabtree J, Allen JE, Delcher AL, Guiliano DB, Miranda-Saavedra D, Angiuoli SV, Creasy T, Amedeo P, Haas B, El-Sayed NM, Wortman JR, Feldblyum T, Tallon L, Schatz M, Shumway M, Koo H, Salzberg SL, Schobel S, Pertea M, Pop M, White O, Barton GJ, Carlow CK, Crawford MJ, Daub J, Dimmic MW, Estes CF, Foster JM, Ganatra M, Gregory WF, Johnson NM, Jin J, Komuniecki R, Korf I, Kumar S, Laney S, Li BW, Li W, Lindblom TH, Lustigman S, Ma D, Maina CV, Martin DM, McCarter JP, McReynolds L, Mitreva M, Nutman TB, Parkinson J, Peregrín-Alvarez JM, Poole C, Ren Q, Saunders L, Sluder AE, Smith K, Stanke M, Unnasch TR, Ware J, Wei AD, Weil G, Williams DJ, Zhang Y, Williams SA, Fraser-Liggett C, Slatko B, Blaxter ML, Scott AL.
    1989DrdI, a unique restriction endonuclease from Deinococcus radiodurans which recognizes 5'GACN6GTC3'.Nucl.Acids Res.Polisson, C., and Morgan, R.D.
    1998Drosophila Hormone Receptor 38 Functions in Metamorphosis: A Role in Adult Cuticle Formation.GeneticsKozlova, T., Pokholkova, G.V., Tzertzinis, G., Sutherland, J.D., Zhimulev, I.F.and Kafatos, F.C.
    2012Drugs and targets to perturb the symbiosis of Wolbachia and filarial nematodesParasitic Helminths: Targets, Screens, Drugs and VaccinesTaylor, M.J., Ford, L, Ford, Hoerauf, A., Pfarr, K., Foster, J.M., Kumar, S. and Slatko, B.E.
    2012Dual binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants.CellXuehua Zhong, X., Du, J., Bernatavichute, Y.V., Stroud, H., Feng, S., Caro, E., Vashisht, A.A., Chin, H.G., Terragni, J., Tu, A., Hetzel, J., Wohlschlegel, J.A., Pradhan, S., Patel, D.J. and Jacobsen, S.E.
    2004Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with Chromomethylase3.EMBO J.Lindroth, A.M., Shultis, D., Jasencakova, Z., Fuchs, J., Johnson, L., Scubert, D., Patnaik, D., Pradhan, S., Goodrich, J., Schubert, Il, Jenuwein, T., Khorasanizadeh, S.and Jacobsen, S.E
    2007Dual-reporter assay using two secreted luciferase genes Biotechniques Wu, C., Suzuki-Ogoh, C. and Ohmiya, Y.
    2007Dual-reporter assay using two secreted luciferase genesBiotechniquesWu, C., Suzuki-Ogoh, C., Ohmiya, Y.
    2015Dynamic caveolae exclude bulk membrane proteins and are required for sorting of excess glycosphingolipidsNat CommunElena Shvets, Vassilis Bitsikas, Gillian Howard, Carsten Gram Hansen, Benjamin J NicholsSNAP Surface
    2007Dynamic developmental elaboration of N-linked glycan complexity in the Drosophila melanogaster embryoJ. Biol. Chem. Aoki, K., Perlman, M., Lim, J.M., Cantu, R., Wells, L., Tiemeyer, M.
    2011Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiationNature Ficz, G., et al.
    2009E.coli RNase III(E38A) generates discrete-sized products from long dsRNA.RNAXiao, J., Feehery, C.E., Tzertzinis, G.and Maina, C.V.
    1988EarI, a restriction endonuclease from Enterobacter aerogenes which recognizes 5'CTCTTC3'.Nucl.Acids Res.Polisson, C., and Morgan, R.D.
    2009EcR-B1 and Usp nuclear hormone receptors regulate expression of the VM32E eggshell gene during Drosophila  oogenesis.Dev.Biol.Bernardi, F., Romani, P., Tzertzinis, G., Gargiulo, G.and Cavaliere V.
    2009Educational Outreach - Discover the Microbes Within!BioTechniquesWeiner, M.P.and Slatko, B.(eds.)
    2009Educational Outreach - Give Students a Taste for Molecular Biology and Tasting PTC: A New Lab with an Old Flavor.BioTechniquesWeiner, M.P.and Slatko, B.(eds.)
    1999Effect of CWG methylation on expression of plant genes.Biochem J.Pradhan, S., Urwin, N.A., Jenkins, G.I.and Adams, R.L.
    2009Effect of temperature-shift strategy on recombinat chymosin of Kluyveromyces LactisHeilongjiang Animal Science and Veterinary MedicineFeng, Z., et al
    2012Efficient and sequence-independent replication of DNA containing a third base pair establishes a functional six-letter genetic alphabet.Proc. Natl. Acad. Sci. USAMalyshev, D.A., Dhami, K., Quach, H.T., Lavergne, T., Ordoukhanian, P., Torkamani, A. and Romesberg, F.E.
    2013Efficient and specific gene knockdown by small interfering RNAs produced in bacteriaNat Biotechnol.Huang, L., Jin, J., Deighan, P., Liner, E., McReynolds, L. and Lieberman, J.
    2014Efficient DNA ligation in DNA–RNA hybrid helices by Chlorella virus DNA ligaseNucleic Acids ResearchGregory J. S. Lohman, Yinhua Zhang, Alexander M. Zhelkovsky, Eric J. Cantor, Thomas C. Evans Jr.
    2015Efficient expression of full-length antibodies in the cytoplasm of engineered bacteriaNature Communications Robinson, M.-P., Ke, N., Lobstein, J., Peterson, C., Szkodny, A., Mansell, T.J., Tuckey, C., Riggs, P.D., Colussi, P.A., Noren, C.J., Taron, C.H., Delisa, M.P., Berkmen, M.
    2013Efficient genome editing in Caenorhabditis elegans by CRISPR-targeted homologous recombinationNucleic Acids ResChen C, Fenk LA, de Bono MGibson Assembly®
    2011Efficient in vivo selection of a novel tumor-associated peptide from a phage displayMoleculesVeleva, A.N. et al.
    2008Efficient interval partitioning approach for global optimization.Journal of Global OptimizationPedamallu, C.S., Ozdamar, L., Csendes, T.and Vinko, T.
    2002Efficient isolation of targeted Caenorhabditis elegans deletion strains using highly thermostable restriction endonucleases and PCR.Nucl.Acids.Res.Wei, A., Yuan, A., Fawcett, G., Butler, A., Davis, T., Xu, S.Y.and Salkoff, L.
    2014Elimination of inter-domain interactions increases the cleavage fidelity of the restriction endonuclease DraIIIProtein CellZhuo W, Lai X, Zhang L, Chan SH, Li F, Zhu Z, Yang M, Sun D
    2006Enabling Glycosyltransferase Evolution: A Facile Substrate-Attachment Strategy for Phage-Display Enzyme Evolution.Chembiochem.Love K.R., Swoboda J.G., Noren C.J.and Walker, S.
    2002Endosomal localization and function of sortingProc. Natl. Acad. Sci. USAZhong, Q., et al.
    2010Endosymbiont DNA in endobacteria-free filarial nematodes indicates ancient horizontal genetic transfer.PLoS ONEMcNulty, S.N., Foster, J.M., Mitreva, M., Dunning-Hotopp, J.C., Martin, J., Fischer, K., Wu, B., Davis, P.J., Kumar, S., Brattig, N.W., Slatko, B.E., Weil, G.J.and Fischer, P.U.
    2008Endothelial nitric oxide synthase gene expression during murine embryogenesis: commencement of expression in the embryo occurs with the establishment of a unidirectional circulatory system.Circ Res.Teichert, A.M., Scott, J.A., Robb, G.B., Zhou, Y.Q., Zhu, S.N., Lem, M., Keightley, A., Steer, B.M., Schuh, A.C., Adamson, S.L., Cybulsky, M.I.and Marsden, P.A.
    2012Engineered derivatives of maltose-binding proteinProtein EngineeringRiggs, P.D.
    2001Engineering a Nicking Endonuclease N.AlwI by Domain SwappingProc.Natl.Acad.Sci.USA Xu, Y., Lunnen, K.and Kong, H.
    2006Engineering a rare-cutting restriction enzyme: genetic screening and selection of NotI variants.NAR Samuelson, J.C., Morgan, R.D., Benner, J.S., Claus, T.E., Packard, S.L.and Xu, S.Y.
    2011Engineering a waste management enzyme to overcome cancer resistance to apoptosis: adding DNase1 to the anti-cancer toolbox Cancer Gene Ther. Rosner, K., Kasprzak, M.F., Horenstein, A.C., Thurston, H.L., Abrams, J., Kerwin, L.Y., Mehregan, D.A. and Mehregan, D.R.
    2014Engineering Bacterial Transcription Regulation To Create a Synthetic in Vitro Two-Hybrid System for Protein Interaction AssaysJ Am Chem SocZhou Y, Asahara H, Schneider N, Dranchak P, Inglese J, Chong S
    2011Engineering BL21(DE3) derivative strains to minimize Escherichia coli protein contamination after IMAC purification.Appl. Environ. Microbiol.Robichon, C., Luo, J., Causey, T.B., Benner, J.S. and Samuelson, J.C.
    2011Engineering BL21(DE3) derivative strains to minimize Escherichia coli protein contamination after IMAC purification.Appl.Environ.Microbiol.Robichon, C., Luo, J., Causey, T.B., Benner, J.S.and Samuelson, J.C.
    2009Engineering BspQI nicking enzymes and application of N.BspQI in DNA labeling and production of single-strand DNA.Protein Expr.Purif.Zhang, P., Too, P.H., Samuelson, J.C., Chan, S.H., Vincze, T., Doucette, S., Backstrom, S., Potamousis, K.D., Schramm, T.M., Forrest, D., Schwartz, D.C.and Xu, S.Y.
    2012Engineering Escherichia coli for soluble expression and single step purification of active human lysozymeJournal of BiotechnologyLamppa, J.W., Tanyos, S.A., and Griswold, K.E.
    2014Engineering hydrogen gas production from formate in a hyperthermophile by heterologous production of an 18-subunit membrane-bound complexJ Biol ChemLipscomb GL, Schut GJ, Thorgersen MP, Nixon WJ, Kelly RM, Adams MWGibson Assembly®
    2014Engineering nicking enzymes that preferentially nick 5-methylcytosine-modified DNANucleic Acids ResGutjahr A, Xu SYGibson Assembly®
    2010Engineering Nt.BtsCI and Nb.BtsCI nicking enzymes and applications in generating long overhangs.Nucl.Acids.Res.Too, P.H., Zhu, Z., Chan, S.H.and Xu, S.Y.
    2010Engineering of a synthetic electron conduit in living cellsProc. Natl. Acad. Sci. USAJensen, H.M., et al.
    2007Engineering of the yeast Yarrowia lipolytica for the production of glycoproteins lacking the outer-chain mannose residues of N-glycansAppl. Environ. Microbiol.  Song, Y., Choi, M.H., Park, J.N., Kim, M.W., Kim, E.J., Kang, H.A., Kim, J.Y.
    2004Engineering Strand-specific DNA Nicking Enzymes fro the Type IIS Restriction Endonucleases BsaI, BsmBI and BsmAI.J.Mol.Biol.Zhu, Z., Samuelson, J.C., Zhou, J., Dore, A.and Xu, S.-Y.
    2005Engineering substrate specificity of O6-alkylguanine-DNA alkyltransferase for specific protein labeling in living cellsChemBioChem Juillerat A. et al.
    2014Enhanced gene disruption by programmable nucleases delivered by a minicircle vector.Gene TherA-Bk Dad, S Ramakrishna, M Song, H KimGenome Editing
    1987Enhancement of the apparent cleavage specificities of restriction endonucleases: applications to megabase mapping of chromosomes.McClelland, M., and Nelson, M.
    1996Enzymatic C5-Cytosine Methylation Of DNA - Mechanistic Implications Of New Crystal-Structures For HhaI Methyltransferase-DNA-Adohcy Complexes.J.Mol.Biol.O'Gara, M., Klimasauskas, S., Roberts, R., and Cheng, X.D.
    2008Epigenetic mechanisms in mammals.Cell Mol.Life Sci.Kim JK, Samaranayake M, Pradhan S.
    2014Epigenetic silencing of apoptosis-inducing gene expression can be efficiently overcome by combined SAHA and TRAIL treatment in uterine sarcoma cellsPLoS OneFröhlich LF, Mrakovcic M, Smole C, Lahiri P, Zatloukal K
    1986Escherichia coli K-12 restricts DNA containing 5-methylcytosine.Proc.Natl.Acad.Sci.USA Raleigh, E.A., and Wilson, G.
    2014Establishment of a CpG island microarray for analyses of genome-wide DNA methylation in Chinese hamster ovary cellsAppl Microbiol BiotechnolWippermann A, Klausing S, Rupp O, Albaum SP, Büntemeyer H, Noll T, Hoffrogge R
    2014Evaluation of fluorophores to label SNAP-tag fused proteins for multicolor single-molecule tracking microscopy in live cellsBosch PJ, Corrêa IR Jr, Sonntag MH, Ibach J, Brunsveld L, Kanger JS, Subramaniam V
    1998Evaluation of the ASSURE/FH Antibody Assay for the Detection of Feline Heartworm Infection.Proc.Amer.Heartworm Symp.Bestul, K.J., McCall, J.W., Supakorndej, N., Ma, D., Carlow, C.K.S.
    2006Evaluation of two novel tag-based labeling technologies for site-specific modification of proteinsInt. J. Biol. Macromol.Tirat A. et al.
    2013Evaluation of UDP-GlcN Derivatives for Selective Labeling of 5-(Hydroxymethyl)cytosineChembiochemDai N, Bitinaite J, Chin HG, Pradhan S, Corrêa IR Jr.
    2006Evidence supporting a cisi-enedio-based mechanism for Pyrococcus furiousus phophoglucose isomerase.J Mol Biol.Berrisford, J.M., Hounslow, A.M., Akerboom, J., Hagen, W.R., Brouns, S.J., van der Oost, J., Murray, I.A., Michael Blackburn, G., Waltho, J.P., Rice, D.W.and Baker, P.J.
    2010Evolution of Bacterial Phosphoglycerate Mutases: Non-homologous Isofunctional Enzymes Undergoing Gene Losses, Gains and Lateral Transfers.PLoS ONEFoster, J.M., Davis, P.J., Raverdy, S., Sibley, M.H., Raleigh, E.A., Kumar, S.and Carlow, C.K.S.
    2014Evolution, mechanisms, and applications of intein-mediated protein splicingJ Biol ChemPerler FB, Allewell NM
    2010Evolutionary divergence in the fungal response to fluconazole revealed by soft clusteringGen. Bio. Kuo, D., et al.
    1998Evolutionary evidence for recombination among bacteria in nature.E.coli.Horizontal Gene Transfer Milkman, R., Cryderman, D., McKane, M., McWeeny, K.and Raleigh E.A.
    2006Evolving the substrate specificity of O6 alkylguanine DNA alkyltransferase through loop insertion for applications in molecular imagingACS Chem Biol. Heinis C. et al.
    2011ExonucleasesCurr.Protoc.Mol.Biol.McReynolds, L.A.and Nichols, N.M.
    2014Expanded genetic codes in next generation sequencing enable decontamination and mitochondrial enrichmentPLoS OneMcKernan KJ, Spangler J, Zhang L, Tadigotla V, McLaughlin S, Warner J, Zare A, Boles RG
    2009Expanding the chemical Biologist's tool kit: chemical labelling strategies and its applications Curr. Med. Chem.  Chattopadhaya S. et al.
    2011Expanding the definition of class 3 inteins and their proposed phage origin.J.Bacteriol.Tori, K.and Perler, F.B.
    2011Expanding the genetic code of Escherichia coli with PhosphoserineSciencePark, H.S., Hohn, M.J., Umehara, T., Guo. L.T., Osborne, E.M., Benner, J., Noren, C.J., Rinehart, J. and Soll, D.
    2005Explosive Lineage-Specific Expansion of the Orphan Nuclear Receptor HNF4 in Nematodes.J Mol Evol.Robinson-Rechavi, M, Maina, C.V., Gissendanner, C.R., Laudet, V., Sluder, A.
    2010Expressed protein ligation for the preparation of fusion proteins with cell penetrating peptides for endotoxin removal and intracellular deliveryBiochim Biophys Acta Yu, H. H., et. al.
    2007Expressed protein ligation using an N-terminal cysteine containing fragment generated in vivo from a pelB fusion proteinProtein Expr. Purif.Hauser, P. S., et al.
    2004Expression and function of conserved nuclear receptor genes in Caenorhabditis elegans.Dev.Biol.Gissendanner, C.R., Crossgrove, K., Kraus, K.A., Maina, C.V.and Sluder, A.E.
    2007Expression and purification of BmrI restriction endonuclease and its N-terminal cleavage domain variants.Protein Expr.Purif.Bao, Y., Higgins, L., Zhang, P., Chan, S-H., Laget, S., Sweeney, S., Lunnen, K.and Xu, S-Y.
    2000Expression and purification of recombinant proteins by fusion to maltose-binding protein.Mol.Biotechnol.Riggs, P.
    2008Expression of a cytotoxic cationic antibacterial peptide in Escherichia coli using two fusion partnersProtein Exp. Purif.Chen, Y. Q., et. al.