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2015The diversity of Bet v 1-specific IgG4 antibodies remains mostly constant during the course of birch pollen immunotherapyJ Allergy Clin ImmunolSubbarayal B., Schiller D., Möbs C., Pfützner W., Jahn-Schmid B., Gepp B., Breiteneder H., Vieths S., Bohle B.
2010The Deinococcus radiodurans Snf2 intein caught in the act: Detection of the Class 3 intein signature Block F.branched intermediate.Protein Sci.Brace, L.E., Southworth, M.W., Tori, K., Cushing, M.L.and Perler, F.
2010The de novo cytosine methyltransferase DRM2 requires intact UBA domains and a catalytically mutated paralog DRM3 during RNA-directed DNA methylation in Arabidopsis thalianaPLoS Genet.Henderson, I.R., Deleris, A., Wong, W., Zhong, X.H., Chin, H.G., Horwitz, G.A., Kelly, K.A., Pradhan, S., Jacobsen, S.E.
1999The Cyclization and Polymerization of Bacterially Expressed Proteins Using Modified Self-splicing Inteins.J.Biol.Chem.Evans, T.C., Benner, J.and Xu, M-Q
1992The corrected nucleotide sequences of the TaqI restriction and modification enzymes reveal a thirteen-codon overlap.GeneBarany, F., Slatko, B., Danzitz, M., Cowburn, D., Schildkraut, I., and Wilson, G.G.
2013The complex methylome of the human gastric pathogen Helicobacter pyloriNucleic Acids ResearchJuliane Krebes, Richard D. Morgan, Boyke Bunk, Cathrin Spröer, Khai Luong, Raphael Parusel, Brian P. Anton, Christoph König, Christine Josenhans, Jörg Overmann, Richard J. Roberts, Jonas Korlach, Sebastian Suerbaum
2014The complex methylome of the human gastric pathogen Helicobacter pyloriNucleic Acids ResKrebes J, Morgan RD, Bunk B, Spröer C, Luong K, Parusel R, Anton BP, König C, Josenhans C, Overmann J, Roberts RJ, Korlach J, Suerbaum S
2015The complete methylome of Helicobacter pylori UM032BMC GenomicsLee, W.C., Anton, B.P., Wang, S., Baybayan, P., Singh, S., Ashby, M., Chua, E.G., Tay, C.Y., Thirriot, f., Loke, M.F., Goh, K.L., Marshall, B.J., Robert, R.J. and Vadivelu, J.
2009The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms).PLoS ONEYang, J.C., Madupu, R., Durkin, A.S., Ekborg, N.A., Pedamallu, C.S., Hostetler, J.B., Radune, D., Toms, B.S., Henrissat, B., Coutinho, P.M., Schwarz, S., Field, L., Trindade-Silva, A.E., Soares, C.A., Elshahawi, S., Hanora, A., Schmidt, E.W., Haygood, M.G., Posfai, J., Benner, J., Madinger, C., Nove, J., Anton, B., Chaudhary, K., Foster, J., Holman, A., Kumar, S., Lessard, P.A., Luyten, Y.A., Slatko, B., Wood, N., Wu, B., Teplitski, M., Mougous, J.D., Ward, N., Eisen, J.A., Badger, J.H.and Distel, D.L.
2013The COMBREX project design methodology and initial resultsPLOS ONE Anton BP, Chang YC, Brown P, Choi HP, Faller LL, Guleria J, Hu Z, Klitgord N, Levy-Moonshine A, Maksad A, Mazumdar V, McGettrick M, Osmani L,Pokrzywa R, Rachlin J, Swaminathan R, Allen B, Housman G, Monahan C, Rochussen K, Tao K, Bhagwat AS, Brenner SE, Columbus L, de Crécy-Lagard V, Ferguson D, Fomenkov A, Gadda G, Morgan RD, Osterman AL, Rodionov DA, Rodionova IA, Rudd KE, Söll D, Spain J, Xu SY, Bateman A,Blumenthal RM, Bollinger JM, Chang WS, Ferrer M, Friedberg I, Galperin MY, Gobeill J, Haft D, Hunt J, Karp P, Klimke W, Krebs C, Macelis D, Madupu R, Martin MJ, Miller JH, O'Donovan C, Palsson B, Ruch P, Setterdahl A, Sutton G, Tate J, Yakunin A, Tchigvintsev D, Plata G, Hu J, Greiner R, Horn D,Sjölander K, Salzberg SL, Vitkup D, Letovsky S, Segrè D, DeLisi C, Roberts RJ, Steffen M, Kasif S.
2014The CLO3403/CLO3404 Two-Component System of Clostridium botulinum E1 Beluga Is Important for Cold Shock Response and Growth at Low TemperaturesAppl Environ MicrobiolMascher G, Derman Y, Kirk DG, Palonen E, Lindström M, Korkeala H
1987The cleavage site for the restriction endonucleases BanI and HgiCI is 5' ...G^GPyPuCC ...3'.Nucl.Acids Res.Schildkraut, I., Lynch, J., and Morgan, R.
1984The cleavage site for the restriction endonuclease EcoRV is 5'-GAT^ATC-3'.GeneSchildkraut, I., Banner, C.D.B., Rhodes, C.S., and Parekh, S.
2005The chitin synthase genes chs-1 and chs-2 are essential for C.elegans development and responsible for chitin deposition in the eggshell and pharynx, respectively.Dev.Biol.Zhang, Y., Foster, J.M., Nelson, L.S., Ma, D.and Carlow C.K.S.
2011The characterization of human adenylate kinases 7 and 8 demonstrates differences in kinetic parameters and structural organization among the family of adenylate kinase isoenzymes Biochem J.  Panayiotou, C., Solaroli, N., Xu, Y., Johansson, M. and Karlsson, A.
1988The characterization and cloning of the NotI restriction-modification systemHereditySznyter, L.A., Brooks. J.E.
1988The characterization and cloning of the EagI restriction-modification system.Gene Sznyter, L.A., and Brooks, J.E.
2008The Caenorhabditis elegans NR4A nuclear receptor is required for spermatheca morphogenesis.Dev.Biol.Gissendanner, C.R., Kelley, K., Nguyen, T.Q., Hoener, M.C., Sluder, A.E.and Maina, C.V.
2008The BsaHI restriction-modification system: Cloning, sequencing and characterisation of DNA recognising motifs.BMC Molecular Biology Neely, R.K.and Roberts, R.J.
2004The bacterial catalase from filarial DNA preparations derives from common pseudomonad contaminants and not from Wolbachia endosymbionts.Parasitol.Res.Foster, J., Baldo, L., Blaxter, M., Hendle-Duhrsen, K., Whitton, C., Slatko, B.and Bandi, C
2011The Arthrobacter Species FB24 Arth_1007 (DnaB) Intein Is a Pseudogene.PLoS ONETori, K.and Perler, F.B.
2009The apearance of pyrrolysine in tRNAHis guanylyltransferase by neutral evolution.Proc.Natl.Acad.Sci.USAHeinemann, I.U., O'donoghue, P., Madinger, C., Benner, J., Randau, L., Noren, C.J.and Soll, D.
1988The Amino Acid Sequence of the Eukaryotic DNA [N6-adenine] Methyltransferase, M-CviBIII, Has Regions of Similarity With the Prokaryotic Isoschizomer M-TaqI and Other DNA [N6-adenine] Methyltransferases.GeneNarva, K.E., Van Etten, J.L., Slatko, B.E.and Benner, J.S.
2014The ambrosia symbiosis is specific in some species and promiscuous in others: evidence from community pyrosequencing.ISME JMartin Kostovcik, Craig C Bateman, Miroslav Kolarik, Lukasz L Stelinski, Bjarte H Jordal, Jiri HulcrHigh-Fidelity PCR
2013The advantages of SMRT™ sequencing.  Genome Biology Roberts, R.J., Carneiro, M.O., Schatz, M.C.
2001The activity of the murine DNA methyltransferase Dnmt1 is controlled by interaction of the catalytic domain with the N-terminal part of the enzyme leading to an allosteric activation of the enzyme after binding to methylated DNAJ. Mol. Biol.Fatemi, M., Hermann, A., Pradhan, S., Jeltsch, A.
2015Terminal Mannose Residues in Seminal Plasma Glycoproteins of Infertile Men Compared to Fertile DonorsInt J Mol SciBeata O., Jarząb A., Kratz E., Zimmer M., Gamian A., Ferens-Sieczkowska M.
2015Ten simple rules to win a nobel prizeRoberts, R.J.
2013Ten eleven translocation enzymes and 5-hydroxymethylation in mammalian development and cancerAdv Exp Med BiolKinney, S.R. and Pradhan, S.
2008Template-Independent DNA Polymerases.Curr.Protoc.Mol.Biol.Yue, D., Tabor, S.and Nichols, N.M.
2008Templated protein assembly on micro-contact-printed surface patterns. Use of the SNAP-tag protein functionality LangumuirIversen L. et al.
1996Teaching About ScienceAccountability in ResearchRoberts, R.J.
2016Taxonomer: an interactive metagenomics analysis portal for universal pathogen detection and host mRNA expression profilingGenome BiologyFlygare, S. et al.
2007Tasting Phenylthiocarbamide (PTC): A New Lab With an Old Flavor.Am.Biol.Teacher Merritt, R., Bierwort, L., Slatko, B., Weiner, M., Weiner, E., Ingram, J.and Sciarra, K.
2008Tasting Phenylthiocarbamide (PTC): A New Lab With an Old Flavor.Am.Biol.TeacherMerritt, R., Bierwort, L., Slatko, B., Weiner, M., Weiner, E., Ingram, J.and Sciarra, K.
2011Targeting the Wolbachia Cell Division Protein FtsZ as a New Approach for Antifilarial Therapy.PLoS Neglected Tropical DiseasesLi, Z., Garner, A.L., Gloeckner, C., Janda, K.D.and Carlow, C.K.
2009Targeting of tumor blood vessels: a phage-displayed tumor-homing peptide specifically binds to matrix metalloproteinase-2-processed collagen IV and blocks angiogenesis in vivoMol. Cancer Res.Mueller, J. et al.
2010Targeting of embryonic stem cells by peptide-conjugated quantum dotsPLoS OneLu, S. et al.
2008Targeting DNA (5)mCpG sites with chimeric endonucleases.Anal.Biochem.Formenkov, A., Too, P.H., Chan, S.H., Vaisvila, R., Cantin, B.A., Mazzola, L., Tam, V.and Xu, S.Y.
2011Targeting choroid plexus epithelia and ventricular ependyma for drug delivery to the central nervous systemBMC NeurosciGonzalez, A.M. et al.Phage Display
2010Targeted photoswitchable probe for nanoscopy of biological structures ChemBioChem Dellagiacoma, C. et al.
2008Targeted nanoparticles for imaging incipient pancreatic ductal adenocarcinomaPLoS Med.Kelly, K.A. et al.
2015Targeted Glycoengineering Extends the Protein N-glycosylation Pathway in the Silkworm Silk GlandInsect Biochem Mol BiolAsazuma HM., Sohn BH., Kim Y.S., Kuo CW., Khoo KH., Kucharski CA., Fraser MJ., Jarvis DL.
2012Targeted genome enrichment for efficient purification of endosymbiont DNA from host DNASymbiosisGeniez, S., Foster, J.M., Kumar, S., Moumen, B., Leproust, E., Hardy, O., Guadalupe, M., Thomas, S.J., Boone, B., Hendrickson, C., Bouchon, D., Greve, P and Slatko, B.E.
2017Targeted enrichment and sequencing of recent endosymbiont-host lateral gene transfersSci Rep.Dunning Hotopp, J.C., Slatko, B.E., Foster, J.M.
2013Targeted drug delivery systems mediated by a novel peptide in breast cancer therapy and imagingPLoS OneLu, R.-M. et alPhage Display
2013Targeted delivery of proapoptotic peptides to tumor-associated macrophages improves survivalProc. Natl. Acad. Sci. Cieslewicz, M. et alPhage Display
2015TALEN-mediated targeting of HPV oncogenes ameliorates HPV-related cervical malignancy.J Clin InvestZheng Hu, Wencheng Ding, Da Zhu, Lan Yu, Xiaohui Jiang, Xiaoli Wang, Changlin Zhang, Liming Wang, Teng Ji, Dan Liu, Dan He, Xi Xia, Tao Zhu, Juncheng Wei, Peng Wu, Changyu Wang, Ling Xi, Qinglei Gao, Gang Chen, Rong Liu, Kezhen Li, Shuang Li, Shixuan Wang, Jianfeng Zhou, Ding Ma, Hui Wang Genome Editing
2009Tag-probe labeling methods for live-cell imaging of membrane proteins Biochim. Biophys. Acta. Uano Y. and Matsuzaki K.
2011T4 RNA ligase 2 truncated active site mutants: improved tools for RNA analysis.BMC Biotechnol.Viollet, S., Fuchs, R.T., Munafo, D.B., Zhuang, F.and Robb, G.B.
2007Synthetic analogues of glycosylphosphatidylinositol-anchored proteins and their behavior in supported lipid bilayersJ. Am. Chem. Soc. Paulick, M. G., et al.
2007Synthesis of Polyester by Means of Genetic Code ReprogrammingChem. Biol. Ohta, A., Murakami, H., Higashimura, E., and Suga, H.
2004Synthesis of fluorescently labeled mono- and diprenylated Rab7 GTPaseJ. Am. Chem. Soc.Durek, T., et al.
2006Synthesis and evaluation of the bioluminescent activity of (S)-Cypridina luciferin and its analogsTetrahedron LettersWu, C., Kawasaki, K., Ohgiya, S., Ohmiya, Y.
2004Synthesis and characterization of bifunctional probes for the specific labeling of fusion proteinsBioorg. Med. Chem. Lett. Kindermann M. et al.
2015Sul1 and Sul2 Sulfate Transceptors Signal to Protein Kinase A upon Exit of Sulfur Starvation.J Biol ChemHarish Nag Kankipati, Marta Rubio-Texeira, Dries Castermans, George Diallinas, Johan M TheveleinHigh-Fidelity PCR
2008Subunit-specific surface mobility of differentially labeled AMPA receptor subunitsEur. J. Cell Biol. Kropf M. et al.
2007Subtilisin-like proteases in nematodes.Mol.Biochem.Parasitol.Poole, C.B., Jin, J.and McReynolds, L.A.
2013Substrates for Improved Live-Cell Fluorescence Labeling of SNAP-tagCurrent Pharmaceutical DesignIvan R. Corrêa Jr, Brenda Baker, Aihua Zhang, Luo Sun, Christopher R. Provost, Grazvydas Lukinavicius, Luc Reymond, Kai Johnsson, and Ming-Qun Xu
2004Substrate specificity and kinetic mechanism of mammalian G9a histone H3 methyltransferase.J.Biol.Chem.Patnaik, D., chin, H.G., esteve, P.O., Benner, J., Jacobsen, S.E.and Pradhan, S.
1997Substrate DNA and cofactor regulate the activities of a multi-functional restriction-modification enzyme, Bcgl.Nucl.Acids Res.Kong, H., and Smith, C.L.
2012Substrate cooperativity in marine luciferasesPLoS OneTzertzinis, G., Schildkraut, E., and Schildkraut, I.
2012Substrate cooperativity in marine luciferases PLoS OneTzertzinis, G., Schildkraut, E. and Schildkraut, I.
2003Study of protein splicing and intein-mediated peptide bond cleavage under high-cell-density conditions.Biotechnol.Prog.Sharma, S., Zhang, A., Wang, H., Harcum, S.W.and Chong S.
2012Stucture and cleavage activity of the tetrameric MspJI DNA modification-dependent restriction endonuclease.Nucleic Acids ResearchHorton, J.R., Mabuchi, M., Cohen-Karni, D., Zhang, X., Griggs, R., Samaranayake, M., Roberts, R.J., Zheng, Y. and Cheng, X.
2008Structures of the rare-cutting restriction endonuclease NotI reveal a unique metal binding fold involved in DNA binding.StructureLambert, A.R., Sussman, D., Shen, b., Maunus, R., Nix, J., Samuelson, J., Xu, S.Y.and Stoddard, B.L.
1998Structures of HhaI methyltransferase complexed with substrates containing mismatches at the target base.Nature Struct.Biol.O'Gara, M., Horton, J.R., Roberts, R.J.and Cheng, X.
1999Structures of a Binary Complex of HhaI Methyltransferase with S-adenosyl-L-methionine Formed in the Presence of a Short Non-specific DNA Oligonucleotide.J.Mol.Biol.O'Gara, M., Zhang, X., Roberts, R.J.and Cheng, X.
2012Structure-function analysis of Methanobacterium thermoautotrophicum RNA ligase - engineering a thermostable ATP independent enzymeBMC Mol Biol.Zhelkovsky, A.M. and McReynolds, L.A.
2016Structure of Type IIL Restriction-Modification Enzyme MmeI in Complex with DNA Has Implications for Engineering New Specificities.PLoS Biol.Callahan, S.J., Luyten, Y.A., Gupta, Y.K., Wilson, G.G., Roberts, R.J., Morgan, R.D. and Aggarwal, A.K.
2014Structure of the Trehalose-6-phosphate Phosphatase from Brugia malayi Reveals Key Design Principles for Anthelmintic DrugsPLoS PathogFarelli JD, Galvin BD, Li Z, Liu C, Aono M, Garland M, Hallett OE, Causey TB, Ali-Reynolds A, Saltzberg DJ, Carlow CK, Dunaway-Mariano D, Allen KN
2004Structure of the Q237W mutant of HhaI DNA methyltransferase: An insight into protein-protein interactions.Biol.Chem.Dong, A., Zhou, L., Zhang, X., Stickel, S., Roberts, R.J.and Cheng, X.
1997Structure of the Multimodular Endonuclease FokI Bound to DNA.NatureWah, D.A., Hirsch, J.A., Dorner, L.F., Schildkraut, I., Aggarwal, A.K.
2003Structure of the large FK506-binding protein FKBP51, an Hsp90-binding protein and a component of steroid receptor complexesProc. Natl. Acad. Sci. USASinars, C.R., et al.
1994Structure of restriction endonuclease BamHI phased at 1.95 A resolution by MAD analysis.StructureNewman, M., Strzelecka, T., Dorner, L.F., Schildkraut, I., and Aggarwal, A.K.
1994Structure of restriction endonuclease BamHI and its relationship to EcoRI.NatureNewman, M., Strzelecka, T., Dorner, L.F., Schildkraut, I., and Aggarwal, A.K.
2003Structure of Rab GDP-dissociation inhibitor in complex with prenylated YPT1 GTPaseScienceRak, A., et al.
1994Structure of PvuII endonuclease with cognate DNA.EMBO J.Cheng, X., Balendiran, K., Schildkraut, I., and Anderson, J.E.
2015Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA.Nucleic Acids ResHashimoto H, Pais JE, Dai N, Corrêa IR Jr, Zhang X, Zheng Y, Cheng X.
2005Structure of HinP1I endonuclease reveals a striking similarity to the monomeric restriction enzyme MspI.Nucl.Acids.Res.Yang, Z., Horton, J.R., Maunus, R., Wilson, G.G., Roberts, R.R.and Cheng, X.
1998Structure of FokI has Implications for DNA Cleavage.Proc.Natl.Acad.Sci.USA Wah, D.A., Bitinaite, J., Schildkraut, I., Aggarwal, A.K.
1995Structure of BamHI endonuclease bound to DNA: partial folding and unfolding on DNA binding.ScienceNewman, M., Strzelecka, T., Dorner, L.F., Schildkraut, I., and Aggarwal, A.K.
2002Structure of a tRNA Repair Enzyme and Molecular Biology Workhorse: T4 Polynucleotide Kinase.StructureGalburt, E.A., Pelletier, J., Wilson, G.and Stoddard, B.L.
2014Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNANatureHashimoto H, Pais JE, Zhang X, Saleh L, Fu ZQ, Dai N, Corrêa IR Jr, Zheng Y, Cheng X
2013Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNANatureHashimoto, H., Pais, J.E., Zhang, X., Saleh, L., Qing Fu, Z., Dai, N., Correa, I.R. Jr., Zheng, Y. and Cheng X.
2014Structure of 5-hydroxymethylcytosine-specific restriction enzyme AbaSI in complex with DNANucleic Acids ResHorton JR, Borgaro JG, Griggs RM, Quimby A, Guan S, Zhang X, Wilson GG, Zheng Y, Zhu Z, Cheng X
2014Structure and mutagenesis of the DNA modification-dependent restriction endonuclease AspBHISci RepHorton JR, Nugent RL, Li A, Mabuchi MY, Fomenkov A, Cohen-Karni D, Griggs RM, Zhang X, Wilson GG, Zheng Y, Xu SY, Cheng X
2000Structure and function of the mouse DNA methyltransferase Gene, DNMT1 shows a tripartite structure.J.Mol.Biol.Margot, J.B., Aguirre-Arteta, A.M., DiGiacco, B.V., Pradhan, S., Roberts, R.J., Cardoso, M.C.and Leonhardt, H.
2006Structure and dynamics of the epidermal growth factor receptor C-terminal phosphorylation domainProtein Sci.Lee, N.Y., et al.
2001Structural study of restriction enzyme MspI/DNA complex by x-ray crystallographyBiophys. J.Xu, Q., O'Loughlin, T.J., Kucera, R.B., Schildkraut, I., Guo, H.-C.
1990Structural studies opf the BamHI restriction enzymeBiophys. J.Strzelecka, T., Dorner, L., Schildkraut, I., Aggarawal, A.
2000Structural Insights into the Protein Splicing Mechanism of PI-SceI.J.Biol.Chem.Poland, B.W., Xu, M.Q.and Quiocho, F.L.
1999Structural Insights into the Mechanism of Intramolecular Proteolysis.CellXu, M.Q., Buckley, D., Guan, C.and Guo, H-C
2012Structural insights into the assembly and shape of Type III restriction-modification (R-M) EcoP15I complex by small-angle X-ray scattering J Mol biol. Gupta, Y.K., Yang, L., Chan, S.H., Samuelson, J.C., Xu, S.-Y. and Aggarwal, A.K.
2004Structural characterization and comparative phylogenetic analysis of E.coli HemK, a protein (N5)-glutamine methyltransferase.Mol.Microbiol.Yang, Z., Shipman, L., Zhang, M., Anton, B., Roberts, R.J.and Cheng, X.
2012Structural bias in T4 RNA ligase-mediated 3'-adapter ligationNucleic Acids Res.Zhuang, F., Fuchs, R.T., Sun, Z., Zheng, Y. and Robb, G.B.
2015Structural basis of asymmetric DNA methylation and ATP-triggered long-range diffusion by EcoP15INature CommunicationsGupta, Y.K., Chan, S.H., Xu, S.Y., and Aggarwal, A.K.
2014Structural basis for Klf4 recognition of methylated DNANucleic Acids ResearchYiwei Liu, Yusuf Olatunde Olanrewaju, Yu Zheng, Hideharu Hashimoto, Robert M. Blumenthal, Xing Zhang, Xiaodong Cheng
Structural basis for human PRDM9 action at recombination hot spots.Genes Dev.Patel, A., Horton, J.R., Wilson, G.G., Zhang, X. and Cheng, X.
2016Structural basis for human PRDM9 action at recombination hot spotsGenes DevPatel, A., Horton, J.R., Wilson, G.G., Zhang, X. and Cheng, X.