Publications

Publications

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YearTitleJournalAuthorsApplication(s)
1999A natural example of protein trans-splicing.TIBS Perler, F.B.
2013A near-infrared fluorophore for live-cell super-resolution microscopy of cellular proteins. Nature ChemistryLukinavicius, G., Umezawa, K., Olivier, N., Honigmann, A., Yang, G., Plas, T., Mueller, M., Reymond, L., Correa, I.R., Jr., Luo, Z.-G., Schultz, C., Lemke, E.A., Heppenstall, P., Eggeling, C., Manley, S. and Johnsson, K.
2015A New Approach to Produce HIV-1 Envelope Trimers: BOTH CLEAVAGE AND PROPER GLYCOSYLATION ARE ESSENTIAL TO GENERATE AUTHENTIC TRIMERS.J Biol ChemAlSalmi W., Mahalingam M., Ananthaswamy N., Hamlin C., Flores D., Gao G., Rao V.B.
1997A New Enhancer of Position-Effect Variegation in Drosophila melanogaster Encodes a Putative RNA Helicase That Binds Chromosomes and Is Regulated by the Cell Cycle.Genetics Society of AmericaEberl, D.F., Lorenz, L.J., Melnick, M.B., Sood, V., Lasko, P., and Perrimon, N.
2009A new family of receptor tyrosine kinases with a venus flytrap binding domain in insects and other invertebrates activated by aminoacidsPLoS One Ahier A. et al.
2009A new member of the Eschericia coli fad regulon: transcriptional regulation of fadM (ybaW) J. Bacteriol. Feng, Y. and Cronan, J. E.
1990A new type II restriction endonuclease, BsmAI, from Bacillus stearothermophilus.Nucl.Acids Res.Kong, H., Morgan, R.D., and Chen, Z.
1991A new type II restriction endonuclease, BsoOI, from Bacillus stearothermophilusChinese Sci. BullPan, X.S. and Chen, Z.F.
2003A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes.Nucl.Acids Res.Roberts, R.J., Belfort, M.et al.
2004A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes.Nucleic Acids and Molecular BiologyRoberts, R.J., Belfort, M.et al.
1991A Novel Activity in Escherichia coli K-12 That Directs Restriction of DNA Modified at CG Dinucleotides.J.Bacteriol.Kelleher, J.E., and Raleigh, E.A.
1995A novel beta-galactosidase gene isolated from the bacterium Xanthomonas manihotis exhibits strong homology to several eukaryotic beta-galactosidases.GlycobiologyTaron, C.H., Benner, J.S., Hornstra, L.J., and Guthrie, E.P.
2002A novel cyclophilin from parasitic and free-living nematodes with a unique substrate-and drug-binding domain.J.Biol.Chem.Ma, D., Nelson, L.S., LeCoz, K., Poole, C.and Carlow, C.K.S.
2016A novel enrichment strategy reveals unprecedented number of novel transcription start sites at single base resolution in a model prokaryote and the gut microbiome.BMC GenomicsEttwiller, L., Buswell, J., Yigit, E. and Schildkraut, I
2010A novel melanoma-targeting peptide screened by phage display exhibits antitumor activityJ. Mol. Med.Matsuo, A.L. et al.
2010A novel peptide specifically targeting the vasculature of orthotopic colorectal cancer for imaging detection and drug deliveryJ. Control ReleaseLi, Z.J. et. al.
2011A peptide to dimerized translationally controlled tumor protein modulates allergic reactionsJ. Mol. Med.Kim, M.
2011A phage-targeting startegy for the design of spatiotemporal drug delivery from grafted matricesFibrogenesis Tissue RepairSawada, R. et al.
2011A piggyBac transposon-based mutagenesis system for the fission yeast Schizosaccharomyces pombe  Nuc. Acids Res. Li, J., Zhang, J.-M., Li, X. et al
2017A practical guide to the oral microbiome and its relation to health and diseaseKrishnan, K., Chen, T., Paster, B.J.
2015A Proline-Rich Domain in the Genotype 4 Hepatitis E Virus ORF3 PLoS OneWang H., Fangxiao J., Liang H., Gu H.
1995A Promising Recombinant Antigen for the Early Detection of Heartworm Infection.Proceeding of the Heartworm SymposiumHong, X.Q., Mejia, J.S., Nkenfou, C., Perler, F.B., and Carlow, C.K.
2013A Protocol for Construction of Gene Targeting Vectors and Generation of Homologous Recombinant Embryonic Stem CellsMethods in Molecular BiologyHicham Bouabe, Klaus Okkenhaug
2011A Radically Different Mechanism for S-Adenosylmethionine-Dependent Methyltransferases.Science ExpressGrove, T.L., Benner, J.S., Radle, M.I., Ahlum, J.H., Landgraf, B.J., Krebs, C.and Booker, S.J.
2014A restriction enzyme-powered autonomous DNA walking machine: its application for a highly sensitive electrochemiluminescence assay of DNANanoscaleYing Chen, Yun Xiang, Ruo Yuan, Yaqin Chai
2014A robust TALENs system for highly efficient mammalian genome editingSci RepFeng Y, Zhang S, Huang XDNA Assembly and Cloning, Golden Gate Assembly
2008A secreted luciferase for ex vivo monitoring of in vivo processesNat. Methods Wurdinger, T., Badr, C., Pike, L., de Kleine, R., Weissleder, R. and Breakefield, X.O. and Tannous, B.A.
2008A secreted luciferase for ex vivo monitoring of in vivo processesNat. MethodsWurdinger, T., Badr, C., Pike, L., de Kleine, R., Weissleder, R., Breakefield, X.O., Tannous, B.A.
2014A semi-synthetic organism with an expanded genetic alphabetNatureMalyshev, D.A., Dhami, K., Lavergne, T., chen, T., Dai, N., Foster, J.M., Correa Jr., I.R. and Romesberg, F.E.
2015A Sensitive Approach to Map Genome-wide 5-Hydroxymethylcytosine and 5-Formylcytosine at Single-Base ResolutionMol. CellSun, Z., Dai, N., Borgaro, J.G., Quimby, A., Sun, D., Correa, I.R., Jr., Zheng, Y., Zhu, Z. and Guan, S.
2007A sensitive fluorescence intensity assay for deubiquitinating proteases using ubiquitin-rhodamine110-glycine as substrateAnal Biochem.Hassiepen, U., et. al.
1993A sensitive serodiagnostic test for onchocerciasis using a cocktail of recombinant antigens.Am J Trop Med Hyg.Bradley, J.E., Trenholme, K.R., Gillespie, A.J., Guderian, R., Titanji, V., Hong, Y., and McReynolds, L.
2011A set of aspartyl protease-deficient strains for improved expression of heterologous proteins in Kluyveromyces lactisFEMS Yeast Res.Ganatra, M.B., Rainauskas, S., Hong J.M., Taylor, T.E., Denson, J.P.M., Esposito, D., Read, J.D., Schmeisser, H., Zoon, K.C., Hartley, J.L. and Taron, C.H.
2010A set of aspartyl protease-deficient strains for improved expression of heterologous proteins in Kluyveromyces lactis.FEMS Yeast Res.Ganatra, M.B., Vainauskus, S., Hong, J.M., Taylor, T.E., Denson, J.P., Esposito, D., Read, J.D., Schmeisser, H., Zoon, K.C., Hartley, J.L.and Taron, C.H.
2011A set of aspartyl protease-deficient strains for improved expression of heterologous proteins in Kluyveromyces lactis.FEMS Yeast Res.Ganatra, M.B., Vainauskus, S., Hong, J.M., Taylor, T.E., Denson, J.P., Esposito, D., Read, J.D., Schmeisser, H., Zoon, K.C., Hartley, J.L.and Taron, C.H.
2011A set of aspartyl protease-deficient strains for improved expression of heterologous proteins in Kluyveromyces lactisFEMS Yeast Res.Ganatra, M.B., Rainauskas, S., Hong, J.M., Taylor, T.E., Denson, J.P.M., Esposito, D., Read, J.D., Schmeisser, H., Zoon, K.C., Hartley, J.L. and Taron, C.H.
2014A simple and efficient strategy for the de novo construction of greater-than-genome-length hepatitis B virus repliconsJ Virol MethodsWang XJ, Zhang XJ, Hu W, Zhang TY, Wang SQ
2015A simple bridging flocculation assay for rapid, sensitive and stringent detection of gene specific DNA methylationSci RepWee E., Ngo T., Trau M.Epigenetics, DNA Enrichment
2000A simple in vitro Tn7-based transposition system with low target site selectivity for genome and gene analysis.Nucl.Acids Res.Biery, M.C., Stewart, F.J., Stellwagen, A.E., Raleigh, E.A.and Craig, N.L.
2014A simple isothermal DNA amplification method to screen black flies for Onchocerca Volvulus infectionPLoS OneAlhassan, A., Makepeace, B.L., LaCourse, E.J., Osei-Atweneboana, M.Y., Carlow, C.K.S.
2005A single catalytic domain of the junction-resolving enzyme T7 endonuclease I is a non-specific nicking endonuclease.Nucl.Acids Res.Guan, C.and Kumar, S.
2009A single nucleotide polymorphism in the human serotonin transporter introduces a new site for N-linked glycosylationNeuropharmacology Rasmussen, T.N., Plenge, P., Bay, T., Egebjerg, J., Gether, U. Glycobiology
2003A single surface tryptophan in the chitin-binding domain from Bacillus circulans chitinase A1 plays a pivotal role in binding chitin and can be modified to create an elutable affinity tag.Biochim.Biophys.Acta.Ferrandon, S., Sterzenbach, T., Mersha, F.B.and Xu, M-Q
1988A site-specific single strand endonuclease activity induced by NYs-1 virus infection of a Chlorella-like green alga.Nucl.Acids Res.Xia, Y., Morgan, R., Schildkraut, I., and Van Etten, J.L.
2005A small-molecule-based approach to sense codon-templated natural-unnatural hybrid peptides. Selective silencing and reassignment of the sense codon by orthogonal reacylation stalling at the single-codon levelJ. Am. Chem. Soc.Sando, S., Kanatani, K., Sato, N., Matsumoto, H. Hohsaka, T. and Aoyama, Y.
2011A SNAP-tagged detivative of HIV-1 - A versatile tool to study virus-cell interactionsPLoS One Eckhardt, M. et al.
2015A Structural and Functional Comparison Between Infectious and Non-Infectious Autocatalytic Recombinant PrP ConformersPLoS PathogNoble GP., Wang DW., Walsh DJ., Barone JR., Miller MB., Nishina KA., Li S., Supattapone S.
1996A Structural Basis for the Preferential Binding of Hemimethylated DNA by HhaI DNA Methyltransferase.J.Mol.Biol.O'Gara, M., Roberts, R.J., and Cheng, X.
2009A Symbolic Interval Inference Approach for Constraint Satisfaction: Implementation of Kinematics ApplicationsInternational Journal of Operations ResearchPedamallu, C.S.and Ozdamar, L .
2009A synthetic peptide mediated actvie targeting of cisplatin liposomes to Tie2 expressing cellsJ. Control Release.Mai, J. et al.