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    YearTitleJournalAuthorsApplication(s)
    2014Intranasal mRNA nanoparticle vaccination induces prophylactic and therapeutic anti-tumor immunitySci RepPhua KK, Staats HF, Leong KW, Nair SK
    2014Live-cell reporters for fluorescence imagingCurr Opin Chem BiolCorrêa IR Jr.
    2014Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.ScienceJaitin, DA., Kenigsberg, E., Keren-Shaul, H., Elefant, N., Paul, F., Zaretsky, I., Mildner, A., Cohen, N., Jung, S., Tanay, A. and Amit, I.
    2014MBD4 cooperates with DNMT1 to mediate methyl-DNA repression and protects mammalian cells from oxidative stressEpigeneticsLaget S, Miotto B, Chin HG, Estève PO, Roberts RJ, Pradhan S, Defossez PA
    2014Mediated enrichment of siRNAsMethods in Molecular Biology Jin J., McReynolds L.A. and Gullerova M.
    2014Methyllysine reader plant homeodomain (PHD) finger protein 20-like 1 (PHF20L1) antagonizes DNA (cytosine-5) methyltransferase 1 (DNMT1) proteasomal degradationJ Biol ChemEstève PO, Terragni J, Deepti K, Chin HG, Dai N, Espejo A, Corrêa IR Jr, Bedford MT, Pradhan S
    2014Modification-dependent restriction endonuclease, MspJI, flips 5-methylcytosine out of the DNA helixNucleic Acids ResHorton JR, Wang H, Mabuchi MY, Zhang X, Roberts RJ, Zheng Y, Wilson GG, Cheng X
    2014Modification-dependent restriction endonuclease, MspJI, flips 5-methylcytosine out of the DNA helixNucleic Acids ResearchHorton, J.R., Wang, H., Mabuchi, M.Y., Zhang, X., Roberts, R.J., Zheng, Y., Wilson, G.G., Cheng, X
    2014Objective: biochemical functionFront GenetAnton BP, Kasif S, Roberts RJ, Steffen M
    2014Ordering of mutations in preinvasive disease stages of esophageal carcinogenesisNat GenetWeaver JM, Ross-Innes CS, Shannon N, Lynch AG, Forshew T, Barbera M, Murtaza M, Ong CA, Lao-Sirieix P, Dunning MJ, Smith L, Smith ML, Anderson CL, Carvalho B, O'Donovan M, Underwood TJ, May AP, Grehan N, Hardwick R, Davies J, Oloumi A, Aparicio S, Caldas C, Eldridge MD, Edwards PA, Rosenfeld N, Tavaré S, Fitzgerald RC; OCCAMS Consortium
    2014Overview of cell-free protein synthesis: historic landmarks, commercial systems, and expanding applicationsCurr Protoc Mol BiolChong S
    2014p19-mediated enrichment and detection of siRNAsMethods Mol BiolJin J, McReynolds LA, Gullerova M
    2014Polynucleotide 3'-terminal phosphate modifications by RNA and DNA ligasesJournal of Biological ChemistryAlexander M. Zhelkovsky and Larry A. McReynolds
    2014Probing homodimer formation of epidermal growth factor receptor by selective crosslinkingEur J Med ChemSun X, Dusserre-Bresson F, Baker B, Zhang A, Xu P, Fibbe C, Noren CJ, Corrêa IR Jr, Xu MQ
    2014Production of Disulfide-Bonded Proteins in Escherichia coliCurr Protoc Mol BiolKe N, Berkmen M
    2014Protein-protein interactions leading to the recruitment of the host DNA sliding clamp by the hyperthermophilic archaeal virus SIRV2J VirolGardner AF, Bell SD, White MF, Prangishvili D, Krupovic M
    2014Protein splicing: how inteins escape from precursor proteinsJ Biol ChemMills KV, Johnson MA, Perler FB
    2014Protein synthesis using a reconstituted cell-free systemCurr Protoc Mol BiolTuckey C, Asahara H, Zhou Y, Chong S
    2014RNA-RNA Interactions Enable Specific Targeting of Noncoding RNAs to Nascent Pre-mRNAs and Chromatin SitesCellJesse M. Engreitz, Klara Sirokman, Patrick McDonel, Alexander A. Shishkin, Christine Surka, Pamela Russell, Sharon R. Grossman, Amy Y. Chow, Mitchell Guttman, and Eric S. Lander
    2014Sequencing of captive target transcripts identifies the network of regulated genes and functions of primate-specific miR-522Cell RepTan SM, Kirchner R, Jin J, Hofmann O, McReynolds L, Hide W, Lieberman J
    2014SpeedyGenes: an improved gene synthesis method for the efficient production of error-corrected, synthetic protein libraries for directed evolutionProtein Eng Des SelCurrin A, Swainston N, Day PJ, Kell DB
    2014Spontaneous in vitro senescence of glioma cells confirmed by an antibody against IDH1R132HAnticancer ResStoczynska-Fidelus E, Och W, Rieske P, Bienkowski M, Banaszczyk M, Winiecka-Klimek M, Zieba J, Janik K, Rosiak K, Treda C, Stawski R, Radomiak-Zaluska A, Piaskowski S
    2014Strand Invasion Based Amplification (SIBA®): A Novel Isothermal DNA Amplification Technology Demonstrating High Specificity and Sensitivity for a Single Molecule of Target AnalytePLoS OneHoser MJ, Mansukoski HK, Morrical SW, Eboigbodin KE
    2014Structural basis for Klf4 recognition of methylated DNANucleic Acids ResearchYiwei Liu, Yusuf Olatunde Olanrewaju, Yu Zheng, Hideharu Hashimoto, Robert M. Blumenthal, Xing Zhang, Xiaodong Cheng
    2014Structure and mutagenesis of the DNA modification-dependent restriction endonuclease AspBHISci RepHorton JR, Nugent RL, Li A, Mabuchi MY, Fomenkov A, Cohen-Karni D, Griggs RM, Zhang X, Wilson GG, Zheng Y, Xu SY, Cheng X
    2014Structure of 5-hydroxymethylcytosine-specific restriction enzyme AbaSI in complex with DNANucleic Acids ResHorton JR, Borgaro JG, Griggs RM, Quimby A, Guan S, Zhang X, Wilson GG, Zheng Y, Zhu Z, Cheng X
    2014Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNANatureHashimoto H, Pais JE, Zhang X, Saleh L, Fu ZQ, Dai N, Corrêa IR Jr, Zheng Y, Cheng X
    2014Structure of the Trehalose-6-phosphate Phosphatase from Brugia malayi Reveals Key Design Principles for Anthelmintic DrugsPLoS PathogFarelli JD, Galvin BD, Li Z, Liu C, Aono M, Garland M, Hallett OE, Causey TB, Ali-Reynolds A, Saltzberg DJ, Carlow CK, Dunaway-Mariano D, Allen KN
    2014The CLO3403/CLO3404 Two-Component System of Clostridium botulinum E1 Beluga Is Important for Cold Shock Response and Growth at Low TemperaturesAppl Environ MicrobiolMascher G, Derman Y, Kirk DG, Palonen E, Lindström M, Korkeala H
    2014The complex methylome of the human gastric pathogen Helicobacter pyloriNucleic Acids ResKrebes J, Morgan RD, Bunk B, Spröer C, Luong K, Parusel R, Anton BP, König C, Josenhans C, Overmann J, Roberts RJ, Korlach J, Suerbaum S
    2014Time-resolved fluorescence of 2-aminopurine in DNA duplexes in the presence of the EcoP15I Type III restriction-modification enzymeBiochem Biophys Res CommunMa L, Wu X, Wilson GG, Jones AC, Dryden DT
    2014Transient accumulation of 5-carboxylcytosine indicates involvement of active demethylation in lineage specification of neural stem cellsCell RepWheldon LM, Abakir A, Ferjentsik Z, Dudnakova T, Strohbuecker S, Christie D, Dai N, Guan S, Foster JM, Corrêa IR Jr, Loose M, Dixon JE, Sottile V, Johnson AD, Ruzov A
    2014Trypanosome MKT1 and the RNA-binding protein ZC3H11: interactions and potential roles in post-transcriptional regulatory networksNucleic Acids ResSingh A, Minia I, Droll D, Fadda A, Clayton C, Erben E
    2014Type I restriction enzymes and their relativesNucleic Acids ResLoenen WA, Dryden DT, Raleigh EA, Wilson GG
    2014Type II restriction endonucleases-a historical perspective and moreNucleic Acids ResPingoud A, Wilson GG, Wende W
    2014Whole-genome haplotyping using long reads and statistical methods.Nature BiotechnologyKuleshov, K. et al.
    2014Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequenceGenes DevHashimoto H, Olanrewaju YO, Zheng Y, Wilson GG, Zhang X, Cheng X
    2014Wolbachia endosymbionts and human disease controlMol. Biochem. Parasitol.Slatko, B. E., Luck, A. N., Dobson, S. L. and Foster, J. M.
    2015Developmental exposure to 2,3,7,8-tetrachlorodibenzo-p-dioxin alters DNA methyltransferase (dnmt) expression in zebrafish (Danio rerio)Toxicol Appl PharmacolAluru N, Kuo E, Helfrich LW, Karchner SI, Linney EA, Pais JE, Franks DG
    2015microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach.Parasites & VectorsMacchiaroli, N. et al.
    2015Phylogeny and differentiation of reptilian and amphibian ranaviruses detected in europePLoS OneStöhr AC, López-Bueno A, Blahak S, Caeiro MF, Rosa GM, Alves de Matos AP, Martel A, Alejo A, Marschang RE
    2015Simultaneous generation of many RNA-seq libraries in a single reactionNat MethodsShishkin AA, Giannoukos G, Kucukural A, Ciulla D, Busby M, Surka C, Chen J, Bhattacharyya RP, Rudy RF, Patel MM, Novod N, Hung DT, Gnirke A, Garber M, Guttman M, Livny J
    2015Transcriptional Analysis of Deinococcus radiodurans Reveals Novel Small RNAs That Are Differentially Expressed under Ionizing Radiation.Appl. Environ. Microbiol.Tsai, H.C. et al
    An insight into the various regulatory mechanisms modulating human DNA methyltransferase 1 stability and functionEpigeneticsKar, S., Deb, M., Sengupta, D. Shilpi, A., Parbin, S., Torrisani, J., Pradhan, S. and Patra, S.
    "Bacterial Systems" introduction of Membrane Proteins - Strategies for Expression and IsolationSamuelson, J.C.
    Database of DNA polymerasesCurr Protoc Mol Biol. Langhorst, B.W. and Nichols, N.M.
    2013Decreased vancomycin susceptibility in Staphylococcus aureus caused by IS256 tempering of WalKR expressionAntimicrob Agents ChemotherMcEvoy CR, Tsuji B, Gao W, Seemann T, Porter JL, Doig K, Ngo D, Howden BP, Stinear TP
    Identification of a cardiac specific protein transduction domain by in vivo biopanning using a M13 phage peptide display library in micePLoS OneZahid, M. et al.
    In vitro RNA interference and immunofluorescence-based phenotype analysis in a human parasitic nematode, Brugia malayiParasites and VectorsLandmann, F., Foster, J.M., Slatko, B.E. and Sullivan, W.
    Near-Infrared Fluorescence Imaging of Mammalian Cells and Xenograft Tumors with SNAP-tagPLoS ONEGong, H.; Kovar, J. L.; Baker, B.; Zhang, A.; Cheung, L.; Draney, D. R.; Corrêa, I. R., Jr.; Xu, M.-Q.; Olive, M. D.