Publications

Publications

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YearTitleJournalAuthorsApplication(s)
2008DNA damage in preserved specimens and tissue samples: a molecular assessment.Frontiers in Zoology Zimmermann, J., Hajibabaei, M., Blackburn, D.C., Hanken, J., Cantin, E., Posfai, J.and Evans, T.C.
2008Endothelial nitric oxide synthase gene expression during murine embryogenesis: commencement of expression in the embryo occurs with the establishment of a unidirectional circulatory system.Circ Res.Teichert, A.M., Scott, J.A., Robb, G.B., Zhou, Y.Q., Zhu, S.N., Lem, M., Keightley, A., Steer, B.M., Schuh, A.C., Adamson, S.L., Cybulsky, M.I.and Marsden, P.A.
2008 Enzyme catalyzed site-specific protein labeling and cell imaging with quantum dotsChem. Comm. Sunbul M. et al.
2008Epigenetic mechanisms in mammals.Cell Mol.Life Sci.Kim JK, Samaranayake M, Pradhan S.
2008DNA distortion and specificity in a sequence-specific endonuclease.J.Mol.Biol.Babic, A.C., Little, E.J., Manohar, V.M., Bitinaite, J., Horton, N.C.
2008DNA Repair Enzymes.Curr.Protoc.Mol.Biol.Evans, T.C., Jr.and Nichols, N.M.
2008Efficient interval partitioning approach for global optimization.Journal of Global OptimizationPedamallu, C.S., Ozdamar, L., Csendes, T.and Vinko, T.
2007NMR assignment of a KlbA intein precursor from Methanococcus jannaschii.Biomol NMR Johnson, M., Southworth, M.Perler, F.and Wuthrich, K.
2007On the taxonomic status of the intracellular bacterium Wolbachia pipientis: should this species name include the intracellular bacteria of filarial nematodes?Int.J.Syst.Evol.Microbiol.Pfarr, K., Foster, J., Slatko B., Hoerauf, A.and Eisen, J.A.
2007New and easy strategy for cloning, expression, purification, and characterization of the 5S subunit of transcarboxylase from Propionibacterium f. shermaniiPrep. Biochem. Biotechnol.Bhat, R. K. and Berger, S.
2007Mutant torsinA interferes with protein processing through the secretory pathway in DYT1 dystonia cells. Proc. Natl. Acad. Sci. USA.Hewett, J.W., Tannous, B., Niland. B.P., Nery, F.C., Zeng, J., Li, Y. and Breakefield, X.
2007Mutant torsinA interferes with protein processing through the secretory pathway in DYT1 dystonia cells Proc. Natl. Acad. Sci. USA Hewett, J.W., Tannous, B., Niland, B.P., Nery, F.C., Zeng, J., Li, Y. and Breakefield, X.O.
2007Rational design of a chimeric endonuclease targeted to NotI recognition site.Protein Eng Des Sel Zhang, P., Bao, Y., Higgins, L.and Xu, S-Y.
2007Rational manipulation of carrier-domain geometry in nonribosomal peptide synthetasesChemBioChem. Liu E and Bruner S. D.
2007Protein synthesis in liposomes with a minimal set enzymesBiochem. Biophys. Res. Commun.  Murtas, G., Kuruma, Y., Bianchini, P., Diaspro, A., and Luisi, P.L.
2007Phosphatase Assays Using Ligated Phosphoprotein Substrates.Nature Protocols Sun, L., Ghosh, I., Kochinyan, S.and Xu.M.Q.
2007Propagation of centromeric chromatin requires exit from mitosis J. of Cell Bio. Jansen L. et al
2007Molecular Mechanisms of Transactivation and Doxorubicin-mediated Repression of survivin Gene in Cancer Cells.J of Biological ChemistryEsteve, P.O., Chin, H.G.and Pradhan, S.
2007Inducing and sensing protein-protein interactions in living cells by selective cross-linkingAngew Chem. Int. Ed Lemercier, G. et al.
2007Influence of chelate conjugation on a newly identified tumor-targeting peptideJ. Nucl. Med.Mier, W. et al.
2007In vivo translation and stability of trans-spliced mRNAs in nematode embryosMol. Biochem. Parasitol. Cheng, G., Cohen, L., Mikhli, C., Jankowska-Anyszka, M., Stepinski, J., Darzynkiewicz, E. and Davis, R.E.
2007In Vivo characterization of the GPI assembly defect in yeast   mcd4-174 mutants and bypass of the Mcd4-p-dependent step in mcd4∆ cells.FEMS Yeast Res.Wiedman, J.M., Fabre, A-L., Taron, B.W., Taron, C.H.and Orlean, P.
2007In vivo translation and stability of trans-spliced mRNAs in nematode embryos.Mol. Biochem. Parasitol.Cheng, G., Cohen, L., Mikhli, C, Jankowska-Anyszka, M., Stepinski, J., Darzynkiewicz, E. and Davis, R.E
2007Mining predicted essential genes of Brugaria malayi for nematode drug targets.PLoS ONEKumar, S., Chaudhary, K., Foster, J., Novelli, J., Zhang, Y., Wang, S., Spiro, D., Ghedin, E.and Carlow.C.
2007Molecular and biochemical characterization of nematode cofactor independent phosphoglycerate mutases.Mol.Biochem.Parasitol.Raverdy, S., Zhang, Y., Foster, J.and Carlow, C.
2007It Takes Two: Lessons From the First Nematode Wolbachia Genome Sequence.Wolbachia, A Bug's LifePfarr, K., Foster, J.and Slatko, B.
2007 Intein-mediated expression is an effective approach in the study of beta-defensinsBiochem Biophys Res CommunDiao, H., et. al.
2007Intein-mediated peptide arrays for epitope mapping and kinase/phosphatase assaysMethods Mol BiolXu, M.Q., Ghosh, I., Kochinyan, S., Sun, L
2007Uncoupling metallonuclease metal ion binding sites via nudge mutagenesis.J Biol Inorg Chem Papadakos, G.A., Nastri, H., Riggs, P.and Dupureur, C.M.
2007Use of intein-mediated phosphoprotein arrays to study substrate specificity of protein phosphatasesBiotechniquesKochinyan, S., et al.
2007UHRF1 Plays a Role in Maintaining DNA Methylation in Mammalian Cells.ScienceBostick, M., Kim, J.K., Esteve, P-O., Clark, A., Pradhan, S and Jacobsen, S.
2007The level of synthesis and secretion of Gaussia princeps luciferase in transfected CHO cells is heavily dependent on the choice of signal peptideJ. BiotechnolKnappskog, S., Ravneberg, H., Gjerdrum, C., Trosse, C., Stern, B., and Pryme I.F.
2007Tracking of human Y receptors in living cells- A fluorescence approachPeptidesBöhme. et al.
2007Viral oncoproteins target the DNA methyltransferasesOncogeneBurgers, W.A., Blanchon, L., Pradhan, S., de Launoit, Y., Kouzarides, T., Fuks,F.
2007Widespread lateral gene transfer from intracellular bacteria to multicellular eukaryotes.ScienceHotopp, J.C., Clark, M.E., Oliveira, D.C., Foster, J.M., Fischer, P., Torres, M.C., Giebel, J.D., Kumar, N., Ishmael, N., Wang, S., Ingram, J., Nene, R.V., Shepard, J., Tomkins, J., Richards, S., Spiro, D.J., Ghedin, E., Slatko, B., Tettelin, H.and Werren, J.H.
2007Viral oncoproteins target the DNA methyltransferasesOncogeneBurgers, W.A., Blanchon, L., Pradhan, S., de Launoit, Y., Kouzarides, T. and Fuks, F.
2007Use of intein-mediated phosphoprotein arrays to study substrate specificity of protein phosphatases.BioTechniquesKochinyan, S., Sun.L., Ghosh, I., Barshevsky, T., Xu, J.and Xu, M.Q.
2007USER friendly DNA engineering and cloning method by uracil excisionNucl.Acids.Res.Bitinaite, J., Rubino, M., Varma, K.H., Schildkraut, I., Vaisvila, R.and Vaiskunaite, R.
2007Tasting Phenylthiocarbamide (PTC): A New Lab With an Old Flavor.Am.Biol.Teacher Merritt, R., Bierwort, L., Slatko, B., Weiner, M., Weiner, E., Ingram, J.and Sciarra, K.
2007Shining a light on protein expression in living organisms.Nat Chem Biol Perler, F.
2007Sialic acid on herpes simplex virus type 1 envelope glycoproteins is required for efficient infection of cells J. Virol. Teuton, J.R., Brandt, C.R.
2007Selection of restriction endonucleases using artificial cells.Nucl.Acids.Res.Zheng, Y.and Roberts, R.
2007Rebase--enzymes and genes for DNA restriction and modificationNucleic Acids ResRoberts, R.J., Vincze, T., Posfai, J., Macelis, D.
2007Selecting targeting of adenoviral vectors to neural precursor cells in the hippocampus of adult mice: new prospects for in situ gene therapyStem CellsSchmidt, A. et al.
2007Synthesis of Polyester by Means of Genetic Code ReprogrammingChem. Biol. Ohta, A., Murakami, H., Higashimura, E., and Suga, H.
2007Synthetic analogues of glycosylphosphatidylinositol-anchored proteins and their behavior in supported lipid bilayersJ. Am. Chem. Soc. Paulick, M. G., et al.
2007Subtilisin-like proteases in nematodes.Mol.Biochem.Parasitol.Poole, C.B., Jin, J.and McReynolds, L.A.
2007Single M13 bacteriophage tethering and stretching.Proc.Natl.Acad.Sci.USAKhalil, A.S., Ferrer, J.M., Brau, r.R., Kottmann, S.T., Noren, C.J., Lang, M.J.and Belcher, A.M.
2007Solution Structure of a KlbA Intein Precursor from Methanococcus jannaschii.Protein Sci.Johnson, M., Southworth, M., Herrmann, T., Brace, L., Perler, F.and Wuthrich, K.
2007 Cell-free metabolic engineering promotes high-level production of bioactive Gaussia princeps luciferase J. Biotechnol. Goerke, A.R. and Loening, A.M., Gambhir, S.S. and Swartz, J.R.