Publications

Publications

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Your search returned 1781 results.

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YearTitleJournalAuthorsApplication(s)
2014Objective: biochemical functionFront GenetAnton BP, Kasif S, Roberts RJ, Steffen M
2014Ordering of mutations in preinvasive disease stages of esophageal carcinogenesisNat GenetWeaver JM, Ross-Innes CS, Shannon N, Lynch AG, Forshew T, Barbera M, Murtaza M, Ong CA, Lao-Sirieix P, Dunning MJ, Smith L, Smith ML, Anderson CL, Carvalho B, O'Donovan M, Underwood TJ, May AP, Grehan N, Hardwick R, Davies J, Oloumi A, Aparicio S, Caldas C, Eldridge MD, Edwards PA, Rosenfeld N, Tavaré S, Fitzgerald RC; OCCAMS Consortium
2014Overview of cell-free protein synthesis: historic landmarks, commercial systems, and expanding applicationsCurr Protoc Mol BiolChong S
2014p19-mediated enrichment and detection of siRNAsMethods Mol BiolJin J, McReynolds LA, Gullerova M
2014PCR amplification of a triple-repeat genetic target directly from whole blood in 15 minutes as a proof-of-principle PCR study for direct sample analysis for a clinically relevant targetBMC Med GenetConnelly CM1, Porter LR2, TerMaat JR
2014Polynucleotide 3'-terminal phosphate modifications by RNA and DNA ligasesJournal of Biological ChemistryAlexander M. Zhelkovsky and Larry A. McReynolds
2014Probing homodimer formation of epidermal growth factor receptor by selective crosslinkingEur J Med ChemSun X, Dusserre-Bresson F, Baker B, Zhang A, Xu P, Fibbe C, Noren CJ, Corrêa IR Jr, Xu MQ
2014Production of Disulfide-Bonded Proteins in Escherichia coliCurr Protoc Mol BiolKe N, Berkmen M
2014Protein-protein interactions leading to the recruitment of the host DNA sliding clamp by the hyperthermophilic archaeal virus SIRV2J VirolGardner AF, Bell SD, White MF, Prangishvili D, Krupovic M
2014Protein splicing: how inteins escape from precursor proteinsJ Biol ChemMills KV, Johnson MA, Perler FB
2014Protein synthesis using a reconstituted cell-free systemCurr Protoc Mol BiolTuckey C, Asahara H, Zhou Y, Chong S
2014RNA-RNA Interactions Enable Specific Targeting of Noncoding RNAs to Nascent Pre-mRNAs and Chromatin SitesCellJesse M. Engreitz, Klara Sirokman, Patrick McDonel, Alexander A. Shishkin, Christine Surka, Pamela Russell, Sharon R. Grossman, Amy Y. Chow, Mitchell Guttman, and Eric S. Lander
2014Sequencing of captive target transcripts identifies the network of regulated genes and functions of primate-specific miR-522Cell RepTan SM, Kirchner R, Jin J, Hofmann O, McReynolds L, Hide W, Lieberman J
2014SpeedyGenes: an improved gene synthesis method for the efficient production of error-corrected, synthetic protein libraries for directed evolutionProtein Eng Des SelCurrin A, Swainston N, Day PJ, Kell DB
2014Spontaneous in vitro senescence of glioma cells confirmed by an antibody against IDH1R132HAnticancer ResStoczynska-Fidelus E, Och W, Rieske P, Bienkowski M, Banaszczyk M, Winiecka-Klimek M, Zieba J, Janik K, Rosiak K, Treda C, Stawski R, Radomiak-Zaluska A, Piaskowski S
2014Stable cell surface expression of GPI-anchored proteins, but not intracellular transport, depends on their fatty acid structureTrafficJanesh, N. Correa, I.R., Jr. and Watanabe, R.
2014Strand Invasion Based Amplification (SIBA®): A Novel Isothermal DNA Amplification Technology Demonstrating High Specificity and Sensitivity for a Single Molecule of Target AnalytePLoS OneHoser MJ, Mansukoski HK, Morrical SW, Eboigbodin KE
2014Structural basis for Klf4 recognition of methylated DNANucleic Acids ResearchYiwei Liu, Yusuf Olatunde Olanrewaju, Yu Zheng, Hideharu Hashimoto, Robert M. Blumenthal, Xing Zhang, Xiaodong Cheng
2014Structure and mutagenesis of the DNA modification-dependent restriction endonuclease AspBHISci RepHorton JR, Nugent RL, Li A, Mabuchi MY, Fomenkov A, Cohen-Karni D, Griggs RM, Zhang X, Wilson GG, Zheng Y, Xu SY, Cheng X
2014Structure of 5-hydroxymethylcytosine-specific restriction enzyme AbaSI in complex with DNANucleic Acids ResHorton JR, Borgaro JG, Griggs RM, Quimby A, Guan S, Zhang X, Wilson GG, Zheng Y, Zhu Z, Cheng X
2014Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNANatureHashimoto H, Pais JE, Zhang X, Saleh L, Fu ZQ, Dai N, Corrêa IR Jr, Zheng Y, Cheng X
2014Structure of the Trehalose-6-phosphate Phosphatase from Brugia malayi Reveals Key Design Principles for Anthelmintic DrugsPLoS PathogFarelli JD, Galvin BD, Li Z, Liu C, Aono M, Garland M, Hallett OE, Causey TB, Ali-Reynolds A, Saltzberg DJ, Carlow CK, Dunaway-Mariano D, Allen KN
2014The CLO3403/CLO3404 Two-Component System of Clostridium botulinum E1 Beluga Is Important for Cold Shock Response and Growth at Low TemperaturesAppl Environ MicrobiolMascher G, Derman Y, Kirk DG, Palonen E, Lindström M, Korkeala H
2014The complex methylome of the human gastric pathogen Helicobacter pyloriNucleic Acids ResKrebes J, Morgan RD, Bunk B, Spröer C, Luong K, Parusel R, Anton BP, König C, Josenhans C, Overmann J, Roberts RJ, Korlach J, Suerbaum S
2014Time-resolved fluorescence of 2-aminopurine in DNA duplexes in the presence of the EcoP15I Type III restriction-modification enzymeBiochem Biophys Res CommunMa L, Wu X, Wilson GG, Jones AC, Dryden DT
2014Transient accumulation of 5-carboxylcytosine indicates involvement of active demethylation in lineage specification of neural stem cellsCell RepWheldon LM, Abakir A, Ferjentsik Z, Dudnakova T, Strohbuecker S, Christie D, Dai N, Guan S, Foster JM, Corrêa IR Jr, Loose M, Dixon JE, Sottile V, Johnson AD, Ruzov A
2014Trypanosome MKT1 and the RNA-binding protein ZC3H11: interactions and potential roles in post-transcriptional regulatory networksNucleic Acids ResSingh A, Minia I, Droll D, Fadda A, Clayton C, Erben E
2014Type I restriction enzymes and their relativesNucleic Acids ResLoenen WA, Dryden DT, Raleigh EA, Wilson GG
2014Type I restriction enzymes and their relativesNucleic Acids ResearchWil A. M. Loenen, David T. F. Dryden, Elisabeth A. Raleigh, Geoffrey G. Wilson
2014Type II restriction endonucleases-a historical perspective and moreNucleic Acids ResPingoud A, Wilson GG, Wende W
2014Whole-genome haplotyping using long reads and statistical methods.Nature BiotechnologyKuleshov, K. et al.
2014Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequenceGenes DevHashimoto H, Olanrewaju YO, Zheng Y, Wilson GG, Zhang X, Cheng X
2014Wolbachia endosymbionts and human disease controlMol. Biochem. Parasitol.Slatko, B. E., Luck, A. N., Dobson, S. L. and Foster, J. M.
2015A database for DNA restriction and modification: enzymes, genes and genomes. Nucleic Acids ResearchRoberts, R.J., Vincze, T., Posfai, J., Macelis, D.
2015A high-throughput assay for the comprehensive profiling of DNA ligase fidelityNucleic Acids ResLohman GJ, Bauer RJ, Nichols NM, Mazzola L, Bybee J, Rivizzigno D, Cantin E, Evans TC Jr.
2015A lipid switch unlocks Parkinson's disease-associated ATP13A2Proc Natl Acad Sci U S AHolemans T., Sørensen DM., Veen S., Martin S., Hermans D., Kemmer GC., Haute C., Baekelandt V., Pomorski TG., Agostinis P., Wuytack F., Palmgren M., Eggermont J., Vangheluwe P.
2015A New Approach to Produce HIV-1 Envelope Trimers: BOTH CLEAVAGE AND PROPER GLYCOSYLATION ARE ESSENTIAL TO GENERATE AUTHENTIC TRIMERS.J Biol ChemAlSalmi W., Mahalingam M., Ananthaswamy N., Hamlin C., Flores D., Gao G., Rao V.B.
2015A Proline-Rich Domain in the Genotype 4 Hepatitis E Virus ORF3 PLoS OneWang H., Fangxiao J., Liang H., Gu H.
2015A Structural and Functional Comparison Between Infectious and Non-Infectious Autocatalytic Recombinant PrP ConformersPLoS PathogNoble GP., Wang DW., Walsh DJ., Barone JR., Miller MB., Nishina KA., Li S., Supattapone S.
2015Adapting capillary gel electrophoresis as a senisitive, high-throughput method to accelerate characterization of nucleic acid metabolic enzymesNucleic Acids ResGreenough, L., Schermerhorn K.M., Mazzola, L., Bybee, J., Rivizzigno, D., Cantin, E., Slatko, B.E., Gardner, A.F.
2015An IL-27/NFIL3 signalling axis drives Tim-3 and IL-10 expression and T-cell dysfunctionNat Commun Zhu, C., Sakuishi, K., Xiao, S., Sun, Z., Zaghouani, S., Gu, G., Wang, C., Tan, D.J., Wu, C., Rangachari, M., Pertel, T., Jin, H.T., Ahmed, R., Anderson, A.C., Kuchroo, V.K.
2015Biochemical characterization of a Naegleria TET-like oxygenase and its application in single molecule sequencing of 5-methylcytosineProc Natl Acad Sci USAPais, J.E., Dai, N., Tamanaha, E., Vaisvila, R., Fomenkov, A.I., Bitinaite, J., Sun, Z., Guan, S., Correa, I.R. Jr., Noren, C.J., Cheng, X., Roberts, R.J., Zheng, Y. and Saleh, L.
2015Caspr2 autoantibodies target multiple epitopes.Neurol Neuroimmunol NeuroinflammOlsen AL., Lai Y., Dalmau J., Scherer SS., Lancaster E.
2015CD24 tracks divergent pluripotent states in mouse and human cells.Nat CommunShakiba N., White C.A., Lipsitz Y.Y., Yachie-Kinoshita A., Tonge P.D., Hussein S.M.I., Puri M.C., Elbaz J., Morrissey-Scoot J., Li M., Munoz J., Benevento M., Rogers I.M., Hanna J.H., Heck A.J.R., Wollscheid B., Nagy A., Zandstra P.W.
2015Cell- and Protein-Directed Glycosylation of Native Cleaved HIV-1 Envelope.J VirolPritchard L.K., Harvey D.J., Bonomelli C., Crispin M., Doores K.J.
2015Cloning Should Be Simple: Escherichia coli DH5α-Mediated Assembly of Multiple DNA Fragments with Short End HomologiesPLoS OneKostylev M., Otwell A.E., Richardson R., Suzuki Y.
2015Comparative Analysis of the Glycosylation Profiles of Membrane-Anchored HIV-1 Envelope Glycoprotein Trimers and Soluble gp140.J VirolGo E.P., Herschhorn A., Gu C., Castillo-Menendez L., Zhang S., Mao Y., Chen H., Ding H., Wakefield J.K., Hua D., Liao H.X., Kappes J.C., Sodroski J., Desaire H.
2015Comparative Population Genomics of African Montane Forest Mammals Support Population Persistence across a Climatic Gradient and Quaternary Climatic Cycles.PLoS One. Demos TC, Kerbis Peterhans JC, Joseph TA, Robinson JD, Agwanda B, Hickerson MJ.
2015Complete genome sequence and methylome analysis of bacillus strain x1Genome AnnouncFomenkov, A., Lunnen, K.D., Zhu, Z., Anton, B.P., Wilson, G.G., Vincze, T. and Roberts, R.J.
2015Complete Genome Sequence of Enteroinvasive Escherichia coli O96:H19 Associated with a Severe Foodborne OutbreakGenome AnnouncPettengill EA, Hoffmann M, Binet R, Roberts RJ, Payne J, Allard M, Michelacci V, Minelli F, Morabito S.