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Publications

We believe that basic research and the cultivation of scientific knowledge is critical for us to stay connected with our customers and to drive scientific breakthroughs. At NEB, over 30 labs participate in research projects, which are aided by post-doctoral fellows and students in Masters and Ph.D. programs. NEB researchers have authored or co-authored over 1,000 publications (as of 1/17) many of which are in peer-reviewed journals. Further, NEB products have been used successfully in numerous publications by scientists throughout the world.

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Year Title Journal Authors Application(s)
2015 Islet Endothelial Cells Induce Glycosylation and Increase Cell-surface Expression of Integrin β1 in β Cells Mol Biol Cell Spelios MG., Olsen JA., Kenna LA., Akirav EM.
2015 Iron-induced Local Complement Component 3 (C3) Up-regulation via Non-canonical Transforming Growth Factor (TGF)-β Signaling in the Retinal Pigment Epithelium. J Biol Chem Yafeng Li, Delu Song, Ying Song, Liangliang Zhao, Natalie Wolkow, John W Tobias, Wenchao Song, Joshua L Dunaief Site Directed Mutagenesis,High-Fidelity PCR
2015 Kinetic pathway of 40S ribosomal subunit recruitment to hepatitis C virus internal ribosome entry site Proc Natl Acad Sci U S A Gabriele Fuchs, Alexey N Petrov, Caleb D Marceau, Lauren M Popov, Jin Chen, Sen E O'Leary, Richard Wang, Jan E Carette, Peter Sarnow, Joseph D Puglisi SNAP Cell,SNAP Surface
2015 Identification of a Conserved Linear B-Cell Epitope of Streptococcus dysgalactiae GapC Protein by Screening Phage-Displayed Random Peptide Library PLoS One Zhang L., Zhang H., Fan Z., Zhou X., Yu L., Sun H., Wu Z., Yu Y., Song B., Ma J., Tong C., Wang X., Zhu Z., Cui Y.
2015 Insulin-like factor regulates neural induction through an IGF1 receptor-independent mechanism. Mol Biol Cell Haramoto Y., Takahashi S., Oshima T., Onuma Y., Ito Y., Asashima M.
2015 Involvement of the heterodimeric interface region of the nucleotide binding domain-2 (NBD2) in the CFTR quaternary structure and membrane stability Sci Rep Julien M., Chauvet S., Scheckenbach KE., Alfaidy N., Chanson M., Benharouga M.
2015 Functional Characterization of Cucurbitadienol Synthase and Triterpene Glycosyltransferase Involved in Biosynthesis of Mogrosides from Siraitia grosvenorii. Plant Cell Physiol Longhai Dai, Can Liu, Yueming Zhu, Jiangsheng Zhang, Yan Men, Zeng Yan, Yuanxia Sun High-Fidelity PCR
2015 CRL4RBBP7 is required for efficient CENP-A deposition at centromeres J Cell Sci Julien Mouysset, Samuel Gilberto, Michelle G Meier, Fabienne Lampert, Mukta Belwal, Patrick Meraldi, Matthias Peter SNAP Cell
2015 Depletion of CG-Specific Methylation in Mycoplasma hyorhinis Genomic DNA after Host Cell Invasion PLoS One Chernov AV., Reyes L., Peterson S., Strongin AY. Epigenetics,Bisulfite Conversion
2015 Compounds targeting disulfide bond forming enzyme DsbB of Gram-negative bacteria Nature Chemical Biology Landeta, C., Blazyk, J.L., Hatahet, F., Meehan, B.M., Eser, M., Myrick, A., Bronstain, L., Minami, S., Arnold, H., Ke, N., Rubin, E.J., Furie, B.C., Furie, B., Beckwith, J., Dutton, R., Boyd, D.
2015 Development of a Rapid, Simple Method for Detecting Naegleria fowleri Visually in Water Samples by Loop-Mediated Isothermal Amplification (LAMP). PLoS One Aongart Mahittikorn, Hirotake Mori, Supaluk Popruk, Amonrattana Roobthaisong, Chantira Sutthikornchai, Khuanchai Koompapong, Sukhontha Siri, Yaowalark Sukthana, Duangporn Nacapunchai Isothermal Amplification
2015 Considerations and protocols for the synthesis of custom protein labeling probes Metholds Mol Biol Correa, I.R. Jr.
2015 Converting a Sulfenic Acid Reductase into a Disulfide Bond Isomerase Antioxid Redox Signal. Chatelle C, Kraemer S, Ren G, Chmura H, Marechal N, Boyd D, Roggemans C, Ke N, Riggs P, Bardwell J, Berkmen M.
2015 Efficient expression of full-length antibodies in the cytoplasm of engineered bacteria Nature Communications Robinson, M.-P., Ke, N., Lobstein, J., Peterson, C., Szkodny, A., Mansell, T.J., Tuckey, C., Riggs, P.D., Colussi, P.A., Noren, C.J., Taron, C.H., Delisa, M.P., Berkmen, M.
2015 Developmental exposure to 2,3,7,8-tetrachlorodibenzo-p-dioxin alters DNA methyltransferase (dnmt) expression in zebrafish (Danio rerio) Toxicol Appl Pharmacol Aluru N, Kuo E, Helfrich LW, Karchner SI, Linney EA, Pais JE, Franks DG
2015 Functional analysis of microRNA activity in Brugia malayi Int J Parasitol Liu, C., Voronin, D., Poole, C.B., Bachu, S., Rogers, M.B., Jin, J., Ghedin, E., Lustigman, S., McReynolds, L.A. and Unnasch, T.R.
2015 Enhanced production of secretory glycoprotein VSTM1-v2 with mouse IgGκ signal peptide in optimized HEK293F transient transfection Sci Rep Liu H., Zou X., Li T., Wang X., Yuan W., Chen Y., Han W.
2015 Dissecting the molecular properties of prokaryotic flotillins PLoS One Juri Nio Bach, Marc Bramkamp SNAP Cell,SNAP Surface
2015 Efficient expression of full-length antibodies in the cytoplasm of engineered bacteria Nat Commun. Robinson MP, Ke N, Lobstein J, Peterson C, Szkodny A, Mansell TJ, Tuckey C, Riggs PD, Colussi PA, Noren CJ, Taron CH, DeLisa MP, Berkmen M.
2015 Dynamic caveolae exclude bulk membrane proteins and are required for sorting of excess glycosphingolipids Nat Commun Elena Shvets, Vassilis Bitsikas, Gillian Howard, Carsten Gram Hansen, Benjamin J Nichols SNAP Surface
2015 Visual detection of isothermal nucleic acid amplification using pH-sensitive dyes. Biotechniques Tanner NA, Zhang Y, Evans TC Jr
2015 Genome Filtering for New DNA Biomarkers of Loa loa Infection Suitable for Loop-Mediated PLoS One Poole CB, Ettwiller L, Tanner NA, Evans TC Jr., Wanji S,Carlow CK
2015 Environmental marine pathogen isolation using mesocosm culture of sharpsnout seabream: striking genomic and morphological features of novel Endozoicomonas sp. Sci Rep. Katharios, P. et al.
2015 Transition in sexual system and sex chromosome evolution in the tadpole shrimp Triops cancriformis. Heredity (Edinb). Mathers TC, Hammond RL, Jenner RA, Hänfling B, Atkins J, Gómez A.
2015 Two new phragmotic ant species from Africa: morphology and next-generation sequencing solve a caste association problem in the genus Carebara Westwood. Zookeys. Fischer G, Azorsa F, Garcia FH, Mikheyev AS, Economo EP.
2015 Trans-Pacific RAD-Seq population genomics confirms introgressive hybridization in Eastern Pacific Pocillopora corals. Mol Phylogenet Evol. Combosch DJ, Vollmer SV.
2015 The evolutionary history of the embiotocid surfperch radiation based on genome-wide RAD sequence data. Mol Phylogenet Evol. Longo G, Bernardi G.
2015 The use of museum specimens with high-throughput DNA sequen. J Hum Evol. Burrell AS, Disotell TR, Bergey CM.
2015 Thousands of RAD-seq Loci Fully Resolve the Phylogeny of the Highly Disjunct Arctic-Alpine Genus Diapensia (Diapensiaceae). PLoS One. Hou Y, Nowak MD, Mirré V, Bjorå CS, Brochmann C, Popp M.
2015 Using Next Generation RAD Sequencing to Isolate Multispecies Microsatellites for Pilosocereus (Cactaceae). PLoS One. Bonatelli IA, Carstens BC, Moraes EM.
2015 SNP-based genetic linkage map of tobacco (Nicotiana tabacum L.) using next-generation RAD sequencing. J Biol Res (Thessalon). Xiao B, Tan Y, Long N, Chen X, Tong Z, Dong Y, Li Y.
2015 High-Density Genetic Mapping with Interspecific Hybrids of Two Sea Urchins, Strongylocentrotus nudus and S. intermedius, by RAD Sequencing. PLoS One. Zhou Z, Liu S, Dong Y, Gao S, Chen Z, Jiang J, Yang A, Sun H, Guan X, Jiang B, Wang B.
2015 High-density interspecific genetic maps of kiwifruit and the identification of sex-specific markers. DNA Res. Zhang Q, Liu C, Liu Y, VanBuren R, Yao X, Zhong C, Huang H.
2015 Identification of single nucleotide polymorphism markers associated with bacterial cold water disease resistance and spleen size in rainbow trout. Front Genet. Liu S, Vallejo RL, Palti Y, Gao G, Marancik DP, Hernandez AG, Wiens GD.
2015 Contrasting genetic structure between mitochondrial and nuclear markers in the dengue fever mosquito from Rio de Janeiro: implications for vector control. Evol Appl. Rašić G, Schama R, Powell R, Maciel-de Freitas R, Endersby-Harshman NM, Filipović I, Sylvestre G, Máspero RC, Hoffmann AA.
2015 Evolution of stickleback in 50 years on earthquake-uplifted islands. Proc Natl Acad Sci U S A Lescak EA, Bassham SL, Catchen J, Gelmond O, Sherbick ML, von Hippel FA, Cresko WA.
2015 Evolutionary and biogeographical patterns of barnacles from deep-sea hydrothermal vents. Mol Ecol. Herrera S, Watanabe H, Shank TM.
2015 RAD sequencing and genomic simulations resolve hybrid origins within North American Canis. Bio Lett. Rutledge LY, Devillard S, Boone JQ, Hohenlohe PA, White BN.
2015 Sequence-tagged high-density genetic maps of Zoysia japonica provide insights into genome evolution in Chloridoideae. Plant J. Wang F, Singh R, Genovesi AD, Wai CM, Huang X, Chandra A, Yu Q.
2015 Restriction Site-Associated DNA Sequencing (RAD-seq) Reveals an Extraordinary Number of Transitions among Gecko Sex-Determining Systems. Mol Biol Evol. Gamble T, Coryell J, Ezaz T, Lynch J, Scantlebury DP, Zarkower D.
2015 Leaf margin phenotype-specific restriction-site-associated DNA-derived markers for pineapple (Ananas comosus L.). Breed Sci. Urasaki N, Goeku S, Kaneshima R, Takamine T, Tarora K, Takeuchi M, Moromizato C, Yonamine K, Hosaka F, Terakami S, Matsumura H, Yamamoto T, Shoda M.
2015 Linkage disequilibrium network analysis (LDna) gives a global view of chromosomal inversions, local adaptation and geographic structure. Mol Ecol Resour. Kemppainen P, Knight CG, Sarma DK, Hlaing T, Prakash A, Maung Maung YN, Somboon P, Mahanta J, Walton C.
2015 Population genomic evidence for adaptive differentiation in Baltic Sea three-spined sticklebacks. BMCBiol. Guo B, DeFaveri J, Sotelo G, Nair A, Merilä J.
2015 Comparative Population Genomics of African Montane Forest Mammals Support Population Persistence across a Climatic Gradient and Quaternary Climatic Cycles. PLoS One. Demos TC, Kerbis Peterhans JC, Joseph TA, Robinson JD, Agwanda B, Hickerson MJ.
2015 Complete Genome Sequence of the freshwater colorless sulfur bacterium Beggiatoa leptomitiformis neotype strain D-402T Genome Announc. Fomenkov, A., Vincze, T., Grabovich, M.Y., Dubinina, G., Orlova, M., Belousova, E., Roberts, R.J.
2015 Complete Genome Sequence of Streptomyces sp. strain CCM_MD2014, isolated from topsoil in Woods Hole, Massachusetts Genome Announc. Mariita, R.M., Bhatnagar, S., Hanselmann, K., Hossain, M.J., Korlach, J., Boitano, M., Roberts, R.J., Liles, M.R., Moss, A.G., Leadbetter, J.R., Newman, D.K., Dawson, S.C.
2015 Differential connectivity of splicing activators and repressors to the human spliceosome Genome Biol. Akerman, M., Fregoso, Ol., Das, S., Ruse, C., Jensen, M.A., Pappin, D.J., Zhang, M.Q., Krainer, A.R.
2015 DNA polymerases in biotechnology Front Microbiol. Gardner, A.F. and Kelman, Z.
2015 Complete Genome Sequence of Curtobacterium sp. strain MR_MD2014, isolated from topsoil in Woods Hole, Massachusetts Genome Announc. Mariita, R.M., Bhatnagar, S., Hanselmann, K., Hossain, M.J., Korlach, J., Boitano, M., Roberts, R.J., Liles, M.R., Moss, A.G., Leadbetter, J.R., Newman, D.K., Dawson, S.C.
2015 Complete Genome Sequence Analysis of Bacillus Subtilis T30 Genome Announc. Xu, S-Y., Boitano, M., Clark, T.A., Vincze, T., Fomenkov, A., Kumar, S., Too, PH-M., Gonchar, D., Degtyarev, S.K. and Roberts, R.J.