publications_banner

Publications

We believe that basic research and the cultivation of scientific knowledge is critical for us to stay connected with our customers and to drive scientific breakthroughs. At NEB, over 30 labs participate in research projects, which are aided by post-doctoral fellows and students in Masters and Ph.D. programs. NEB researchers have authored or co-authored over 1,000 publications (as of 1/17) many of which are in peer-reviewed journals. Further, NEB products have been used successfully in numerous publications by scientists throughout the world.

Use the filters below to search for publications by year, journal or keyword. This list may be sorted by clicking on any column header.

  1. BasicResearch_720

    Basic Research

    Learn more about NEB’s commitment to basic research

Search Our Publications

In addition to using the filters to search, this list may be sorted by clicking on the sort options. Titles in orange are linked to the full article text.

Use any combination of the facets and/or perform a keyword(s) search to narrow your results below.

 
Search Filters
  1. Filter by:
  2. and/or
  3. Clear all filters

Your search returned 1797 results.

Search Results
Year Title Journal Authors Application(s)
2010 “Cloning and bioinformatic identification of small RNAs in the filarial nematode,  Brugia malayi”. Mol.Biochem.Parasitol. Poole, C.B.,   Davis, P.J.,  Jin, J.and McReynolds, L.A.
2017 ​Colorimetric tests for diagnosis of filarial infection and vector surveillance using non-instrumented nucleic acid loop-mediated isothermal amplification (NINA-LAMP). PLoS One Poole, C.B., Li, Z., Alhassan, A., Guelig, D., Diesburg, S., Tanner, N.A., Zhang, Y., Evans, T.C. Jr., LaBarre, P., Wanji, S., Burton R.A. and Carlow, C.K.
2003 Zinc Ion Effects on Individual Ssp DnaE Intein Splicing Steps: Regulating Pathway Progression. Biochemistry Nichols, N.M., Benner, J.S., Martin, D.D.and Evans, T.C.Jr.
2001 Zinc Inhibition of Protein trans-Splicing and Identification of Regions Essential for Splicing and Association of a Split Intein. J.Biol.Chem. Ghosh, I., Sun, L.and Xu, M.Q.
2005 Yersinia pestis outer membrane type III secretion protein YscC: expression, purification, characterization, and induction of specific antiserum Protein Expr. Purif. Goodin, J. L., et al.
2011 YaeJ is a novel ribosome-associated protein inEscherichia coli that can hydrolyze peptidyl-tRNA on stalled ribosomes Nucleic Acids Res.  Handa, Y., Inaho, N. and Nameki, N.
1993 Workshop of DNA Probes and PCR for Detection of Filarial Parasies in Vectors Williams, S.A.
2009 Wolbachia lipoprotein stimulates innate and adaptive immunity through toll-like receptors 2 and 6 (TLR2/6) to induce disease manifestations of filariasis. J Biol Chem. Turner, J.D., Langley, R.S., Johnston, K.L., Gentil, K., Ford, L., Wu, B., Graham, M., Sharpley, F., Slatko, B., Pearlman, E.and Taylor, M.J.
1999 Wolbachia genomes and the many faces of symbiosis. Parasitology Today Bandi, C., Slatko, B.and O'Neill, S.L.
2014 Wolbachia endosymbionts and human disease control Mol. Biochem. Parasitol. Slatko, B. E., Luck, A. N., Dobson, S. L. and Foster, J. M.
2014 Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence Genes Dev Hashimoto H, Olanrewaju YO, Zheng Y, Wilson GG, Zhang X, Cheng X
2007 Widespread lateral gene transfer from intracellular bacteria to multicellular eukaryotes. Science Hotopp, J.C., Clark, M.E., Oliveira, D.C., Foster, J.M., Fischer, P., Torres, M.C., Giebel, J.D., Kumar, N., Ishmael, N., Wang, S., Ingram, J., Nene, R.V., Shepard, J., Tomkins, J., Richards, S., Spiro, D.J., Ghedin, E., Slatko, B., Tettelin, H.and Werren, J.H.
2014 Whole-genome haplotyping using long reads and statistical methods. Nature Biotechnology Kuleshov, K. et al.
2017 Whole genome amplification provides suitable control DNA for use in DNA barcoding applications Biop. Bourque, D.A., Naaum, A.M., Distel, D.L., Hanner, R.H.
2016 WGS for surveillance of antimicrobial resistance: a pilot study to detect the prevalence and mechanism of resistance to azithromycin in a UK population of non-typhoidal Salmonella. J Antimicrob Chemother. Nair, S. et al.
2004 Western blot analysis of Src kinase assays using peptide substrates ligated to a carrier protein. BioTechniques Xu, J., Sun, L., Ghosh, I.and Xu, M.-Q.
waffles
2006 Visualizing receptor trafficking in living PNAS Jacquier V. et al.
2009 Visualizing biochemical activities in living cells Nat Chem Biol Johnsson K.
2016 Visualization of Periplasmic and Cytoplasmic Proteins with a Self-Labeling Protein Tag. J Bacteriol Ke, N., Landgraf, D., Paulsson, J. and Berkmen, M.
2003 Visualization of coupled protein folding and binding in bacteria and purification of the heterodimeric complex. Proc.Natl.Acad.Sci.USA Wang, H.and Chong, S.
2015 Visual detection of isothermal nucleic acid amplification using pH-sensitive dyes. Biotechniques Tanner NA, Zhang Y, Evans TC Jr
2015 Visual detection of isothermal nucleic acid amplification using pH-sensitive dyes Biotechniques Tanner, N.A., Zhang, Y. and Evans, T.C., Jr.
1994 VISA: Visual Sequence Analysis for the comparison of multiple amino acid sequences. CABIOS Posfai, J., Szaraz, Z., and Roberts, R.J.
2015 VirB6 and VirB10 from the Brucella type IV secretion system interact via the N-terminal periplasmic domain of VirB6 FEBS Lett Giraldo A.MV., Mary C., Sivanesan D., Baron C.
2007 Viral oncoproteins target the DNA methyltransferases Oncogene Burgers, W.A., Blanchon, L., Pradhan, S., de Launoit, Y., Kouzarides, T. and Fuks, F.
2007 Viral oncoproteins target the DNA methyltransferases Oncogene Burgers, W.A., Blanchon, L., Pradhan, S., de Launoit, Y., Kouzarides, T., Fuks,F.
2004 Versatile protein biotinylation strategies for potential high-throughput proteomics J Am. Chem. Soc. Lue, R.Y., et al.
1988 Vectors that facilitate the expression and purification of foreign peptides in Escherichia coli by fusion to maltose-binding protein. Gene Guan, C.D., Li, P., Riggs, P.D., and Inouye, H.
2013 Vectors Brenner's Encyclopedia of Genetics Anton, B.P.
2010 Vascular-Targeting Anti-Oxidant Therapy in a Model of Hypertension and Stroke J. Cardiovasc. Pharmacol Greig, J.A. et al.
2017 Various Mutations compensate for a deleterious lacZα insert in the replication enhancer of M13 bacteriophage PLoS One Zygiel, E.M., Noren, K.A., Adamkiewicz, M.A., Aprile, R.J., Bowditch, H.K., Carroll, C.L., Cerezo, M.A.S., Dagher, A.M., Hebert, C.R., Hebert, L.E., Mahame, G.M., Milne, S.C., Silvestri, K.M., Sutherland, S.E., Sylvia, A.M., Taveira, C.N., VanValkenburgh, D.J., Noren, C.J., Hall, M.F.
2008 Variation of acharan sulfate and monosaccharide composition and analysis of neutral N-glycans in African giant snail (Achatina fulica) Glycoconjugate Journal Park, Y., Zhang, Z., Laremore, T.N., Li, B., Sim, J.S., Im, A.R., Ahn, M.Y., Kim, Y.S., Linhardt, R.J., Glycoconj, J.
2014 Validation of microinjection methods for generating knockout mice by CRISPR/Cas-mediated genome engineering Sci Rep Horii T, Arai Y, Yamazaki M, Morita S, Kimura M, Itoh M, Abe Y, Hatada I Gibson Assembly®
1998 Utilizing the C-terminal cleavage activity of a protein splicing element to purify recombinant proteins in a single chromatographic step. Nucl.Acids Res. Chong, S., Montello, G.E., Zhang, A., Cantor, E.J., Liao, W., Xu, M.-Q.and Benner, J.
2009 Using shotgun sequence data to find active restriction enzyme genes Nuc. Acid. Res. Zheng, Y., Posfai, J., Morgan, R. D., Vincze, T., and Roberts, R.J.
2015 Using Next Generation RAD Sequencing to Isolate Multispecies Microsatellites for Pilosocereus (Cactaceae). PLoS One. Bonatelli IA, Carstens BC, Moraes EM.
1992 Using Molecular Biological Techniques to Identify and Study Gene Products Involved in Dirofilarial Immunoprophylaxis. American Heartworm Society Hough, D.M., Awobuluyi, M.E., McReynolds, L.A., Carlow, C.K.S., and Maina, C.V.
2016 Using glycosidases to remove, trim, or modify glycans on therapeutic proteins BioProcess International Guthrie, E.P., Magneilli, P.E.
2009 Using chemical approaches to study selenoproteins-Focus on thioredoxin reductases Biochim. Biophys. Acta. Hondal, R. J.
2011 Using a structural and logics systems approach to infer bHLH-DNA binding specificity determinants Nucleic Acids Res. De Masi, F., Grove, C.A., Vedenko, A., Alibés, A., Gisselbrecht, S.S., Serrano, L., Bulyk, M.L. and Walhout, A.J.
2010 USER friendly DNA recombination (USERec): a simple and flexible near homology-independent method for gene library construction Protein Eng Des Sel Villiers BR, Stein V, Hollfelder F USER™ Cloning
2007 USER friendly DNA engineering and cloning method by uracil excision Nucl.Acids.Res. Bitinaite, J., Rubino, M., Varma, K.H., Schildkraut, I., Vaisvila, R.and Vaiskunaite, R.
2016 Use of the Shuffle Strains in Production of Proteins. Curr Protoc Protein Sci. Ren, G., Ke, N. and Berkmen, M.
2009 Use of intein-mediated protein ligation strategies for the fabrication of functional protein arrays Methods Enzymol. Chattopadhaya, S., et al.
2007 Use of intein-mediated phosphoprotein arrays to study substrate specificity of protein phosphatases. BioTechniques Kochinyan, S., Sun.L., Ghosh, I., Barshevsky, T., Xu, J.and Xu, M.Q.
2007 Use of intein-mediated phosphoprotein arrays to study substrate specificity of protein phosphatases Biotechniques Kochinyan, S., et al.
1989 Use of Degenerate Oligonucleotides for Amplification of the nifH Gene from the Marine Cyanobacterium Trichodesmium thiebautii. Appl.Environ.Microbiol., Zehr, J.P., and McReynolds, L.A.
2011 Uptake of radiolabeled GlcNAc into Saccharomyces cerevisiae via native hexose transporters and its in vivo incorporation into GPI precursors in cells expressing heterologous GlcNAc kinase. REMS Yeast Res Scarcelli, J.J., Colussi, P.A., Fabre, A.L., Boles, E., Orlean, P.and Taron, C.H.
2012 Uptake of radiolabeled GIcNAc into Saccharomyces cerevisiae via native hexose transporters and its in vivo incorporation into GPI precursors in cells expressing heterologous GIcNAc kinase FEMS Yeast Res Scarcelli, J.J., Colussi, P.A., Fabre, A.L., Boles, E., Orlean, P., Taron, C.H.
2015 Upregulation of glycans containing 3' fucose in a subset of pancreatic cancers uncovered using fusion-tagged lectins. J Proteome Res Singh S., Kuntal P., Yadav J., Tang H., Partyka K., Kletter D., Hsueh P., Ensink E., Kc B., Hostetter G., Xu E.H., Bern M., Smith D.F., Mehta A.S., Brand R., Melcher K., Haab B.B.
2010 Unusual target site disruption by the rare-cutting HNH restriction endonuclease PacI.Structure Shen, B.W., Heiter, D.F., Chan, S.H., Wang, H., Xu, S.Y., Morgan, R.D., Wilson, G.G.and Stoddard, B.L.
2010 Unusual target site disruption by the rare-cutting HNH restriction endonuclease PacI Structure Shen, B.W., Heiter, D.F., Chan, S.H., Wang, H., Xu, S.Y., Morgan, R.D., Wilson, G.G. and Stoddard, B.L.
2000 Understanding the immutability of restriction enzymes: crystal structure of BglII and its DNA substrate at 1.5 angstrom resolution. Nature Struct.Biol. Lukacs, C.M., Kucera, R., Schildkraut, I.and Aggarwal, A.K.
2007 Uncoupling metallonuclease metal ion binding sites via nudge mutagenesis. J Biol Inorg Chem Papadakos, G.A., Nastri, H., Riggs, P.and Dupureur, C.M.
2007 UHRF1 Plays a Role in Maintaining DNA Methylation in Mammalian Cells. Science Bostick, M., Kim, J.K., Esteve, P-O., Clark, A., Pradhan, S and Jacobsen, S.
2009 UHRF1 binds G9a and participates in p21 transcriptional regulation in mammalian cells. Nucl.Acids.Res. Kim, J.K., Estève, P.O., Jacobsen, S.E.and Pradhan, S.
2014 Ubiquity and diversity of human-associated demodex mites. PLoS One Megan S Thoemmes, Daniel J Fergus, Julie Urban, Michelle Trautwein, Robert R Dunn Routine PCR
1995 Typing marine vent thermophiles by DNA polymerase restriction fragement length polymorphisms. Archaea A Laboratory Manual Perler, F.B., Southworth, M.W., Wilbur, D.G., and Wallace, D.
1988 Type II restriction-modification systems. Trends in Genetics Wilson, G.G.
2014 Type II restriction endonucleases-a historical perspective and more Nucleic Acids Res Pingoud A, Wilson GG, Wende W
2016 Type II restriction endonucleases - a historical perspective and more. Nucleic Acids Res Pingoud, A., Wilson, G.G. and Wende, W.
1993 Type II Restriction Endonucleases Nucleases Roberts, R.J.and Halford, S.E.
2014 Type II Cadherins Guide Assembly of a Direction-Selective Retinal Circuit. Cell Xin Duan, Arjun Krishnaswamy, Irina De la Huerta, Joshua R Sanes High-Fidelity PCR
2014 Type I restriction enzymes and their relatives Nucleic Acids Res Loenen WA, Dryden DT, Raleigh EA, Wilson GG
2014 Type I restriction enzymes and their relatives Nucleic Acids Research Wil A. M. Loenen, David T. F. Dryden, Elisabeth A. Raleigh, Geoffrey G. Wilson
2008 Two-dimensional gel-based approaches for the assessment of N-Linked and O-GlcNAc glycosylation in human and simian immunodeficiency viruses Proteomics Graham, D.R., Mitsak, M.J., Elliott, S.T., Chen, D., Whelan, S.A., Hart, G.W., Van Eyk, J.E. Glycobiology
1986 Two unique restriction endonucleases from Neisseria lactamica. Nucl.Acids Res. Qiang, B.Q., and Schildkraut, I.
1995 Two novel restriction endonucleases from Campylobacter jejuni. Gene Vitor, J.M., and Morgan, R.D.
2013 Two new restriction endonucleases from Proteus vulgaris. Nucl.Acids Res. Gingeras, T.R., Greenough, L., Schildkraut, I., and Roberts, R.J.
1981 Two new restriction endonucleases from Proteus vulgaris. Nucl.Acids Res. Gingeras, T.R., Greenough, L., Schildkraut, I., and Roberts, R.J.
2015 Two new phragmotic ant species from Africa: morphology and next-generation sequencing solve a caste association problem in the genus Carebara Westwood. Zookeys. Fischer G, Azorsa F, Garcia FH, Mikheyev AS, Economo EP.
2005 Two crystal forms of the restriction enzyme MspI-DNA complex show the same novel structure. Protein Sci. Xu, Q.S., Robert, R.J.and Guo, H.-C.
2011 Two Color STED microscopy in living cells. Biomedical Optics Express Pellett, P.A., Sun, X., Gould, T.J., Rothman, J.E., Xu, M-Q, Corrêa, I.R.Jr.and Bewersdorf, J.
2014 Tuning the electrical properties of the heart by differential trafficking of KATP ion channel complexes J Cell Sci Arakel EC, Brandenburg S, Uchida K, Zhang H, Lin YW, Kohl T, Schrul B, Sulkin MS, Efimov IR, Nichols CG, Lehnart SE, Schwappach B Glycobiology
2009 Tuning microbial hosts for membrane protein production Microbial Cell Factories Freigassner, M., Pichler, H. and Glieder, A.
2008 Tuning Escherichia coli for membrane protein overexpression PNAS Wagner, S., Klepsch, M., Schlegel, S., Appel, A., Draheim, R., Tarry, M., Hö, M., van Wijk, K.J., Slotboom, D.J., Persson, J.O. and de Gier, J.
2011 Tuning different expression parameters to achieve soluble recombinant proteins in E. coli: Advantages of high-throughput screening Biotechnology Journal Correa, A. and Oppezzo, P.
2011 Tuned Escherichia coli as a host for the expression of disulfide-rich proteins Biotechnology Journal Salinas, G., Pellizza, L., Margenat, M., et al.
2006 TspMI, a thermostable isoschizomer of XmaI (5'C/CCGGG3'): characterization and single molecule imaging with DNA. Appl Microbiol.Biotechnol. Parashar, V., Capalash, N., Xu, S.Y., Sako, Y.and Sharma, P.
2014 Trypanosome MKT1 and the RNA-binding protein ZC3H11: interactions and potential roles in post-transcriptional regulatory networks Nucleic Acids Res Singh A, Minia I, Droll D, Fadda A, Clayton C, Erben E
2010 Triplet imaging of oxygen consumption during the contraction of a single smooth muscle cell Biophys. J. Geissbuehler M. et al.
2011 TrbB from conjugative plasmid F is a structurally distinct disulfide isomerase that requires DsbD for redox state maintenance. J Bacteriol Hemmis, C.W., Berkmen, M., Eser, M.and Schildbach, J.F.
2004 Transposon-mediated linker insertion scanning mutagenesis of the Escherichia coli McrA endonuclease. J.Bacteriol. Anton, B.P.and Raleigh, E.A.
1992 Transmission-blocking antibodies recognize microfilarial chitinase in brugian lymphatic filariasis. Proc.Natl.Acad.Sci.USA Fuhrman, J.A., Lane, W.S., Smith, R.F., Piessens, W.F., and Perler, F.B.
2010 Transmembrane delivery and biological effect of human growth hormone via a phage displayed peptide in vivo and in vitro J. Pharm. Sci. Zhang, T. et al.
2015 Transition in sexual system and sex chromosome evolution in the tadpole shrimp Triops cancriformis. Heredity (Edinb). Mathers TC, Hammond RL, Jenner RA, Hänfling B, Atkins J, Gómez A.
2014 Transient accumulation of 5-carboxylcytosine indicates involvement of active demethylation in lineage specification of neural stem cells Cell Rep Wheldon LM, Abakir A, Ferjentsik Z, Dudnakova T, Strohbuecker S, Christie D, Dai N, Guan S, Foster JM, Corrêa IR Jr, Loose M, Dixon JE, Sottile V, Johnson AD, Ruzov A
2014 Transcriptomic analysis of carboxylic acid challenge in Escherichia coli: beyond membrane damage PLoS One Royce LA, Boggess E, Fu Y, Liu P, Shanks JV, Dickerson J, Jarboe LR Gibson Assembly®
2015 Transcriptional Analysis of Deinococcus radiodurans Reveals Novel Small RNAs That Are Differentially Expressed under Ionizing Radiation. Appl. Environ. Microbiol. Tsai, H.C. et al
2016 Transcription factor LSF-DNMT1 complex dissociation by FQI1 leads to aberrant DNA methylation and gene expression. Oncotarget Chin, H.G., Ponnaluri, C., Zhang, G., Esteve, P., Schaus, S.E., Hansen, U. and Pradhan, S.
2015 Trans-Pacific RAD-Seq population genomics confirms introgressive hybridization in Eastern Pacific Pocillopora corals. Mol Phylogenet Evol. Combosch DJ, Vollmer SV.
2016 Training the Next Generation of Biomedical Investigators in Glycosciences. J. Clin. Invest. Agre, P., Bertozzi, C., Bissell, M., Campbell, K., Cummings, R., Desai, U., Estes, M., Flotte, T., Fogleman, G.,Gage, F., Ginsburg, D., Gordon, J.I., Hart, G., Hascall, V., Kiessling, L., Kornfeld, S., Lowe, J., Magnani, J., Mahal, L.K., Medzhitov, R., Roberts, R., Sackstein, R., Sarkar, R., Schnaar, R., Schwartz, N., Varki, A., Walt, D., Weissman, I.
2007 Tracking of human Y receptors in living cells- A fluorescence approach Peptides Böhme. et al.
2014 Traceless splicing enabled by substrate induced activation of the Nostoc punctiforme Npu DnaE intein after mutation of a catalytic cystein to serine J Mol Biol. Cheriyan, M., Chan, S-H., Perler, F.
2002 Towards the generation of artificial O6-alkylguanine-DNA alkyltransferases: in vitro selection of antibodies with reactive cysteine residues ChemBioChem Damoiseaux, R. et al
2009 Topological studies of hSVCT1, the human sodium-dependent vitamin C transporter and the influence of N-glycosylation on its intracellular targeting Exp. Cell Res. Velho, A.M., Jarvis, S.M. Glycobiology
2015 TonEBP modulates the protective effect of taurine in ischemia-induced cytotoxicity in cardiomyocytes Cell Death Dis. Yang YJ, Han YY, Chen K, Zhang Y, Liu X, Li S, Wang KQ, Ge JB, Liu W, Zuo J.
2015 Tissue-specific transcriptomics and proteomics of a filarial nematode and its Wolbachia endosymbiont BMC Genomics Luck, A.N., Anderson, K.G., McClung, C.M., VerBerkmoes, N.C., Foster, J.M., Michalski, M.L. and Slatko, B.E. Library Preparation for Next Generation Sequencing
2015 Tissue-specific epigenetics in gene neighborhoods: myogenic transcription factor genes Hum Mol Genet Chandra, S., Terragni, J., Zhang, G., Pradhan, S., Haushka, S., Johnston, D., Baribault, C., Lacey, M. and Ehrlich, M.
2011 Tissue specific distribution and dynamic changes of 5-hydroxymethylcytosine in mammalian genome J. Biol. Chem. Kinney, S.M. et al.
2014 Time-resolved fluorescence of 2-aminopurine in DNA duplexes in the presence of the EcoP15I Type III restriction-modification enzyme Biochem Biophys Res Commun Ma L, Wu X, Wilson GG, Jones AC, Dryden DT
1994 Three-dimensional structure of the adenine-specific DNA methyltransferase M.Taq I in complex with the cofactor S-adenosylmethionine. Proc.Natl.Acad.Sci.USA Labahn, J., Granzin, J., Schluckebier, G., Robinson, D.P., Jack, W.E., Schildkraut, I., and Saenger, W.
2013 Three-color single molecule imaging shows WASP detachment from Arp2/3 complex triggers actin filament branch formation eLife Benjamin A Smith, Shae B Padrick, Lynda K Doolittle, Karen Daugherty-Clarke, Ivan R Corrêa Jr, Ming-Qun Xu, Bruce L Goode3, Michael K Rosen, Jeff Gelles
2015 Thousands of RAD-seq Loci Fully Resolve the Phylogeny of the Highly Disjunct Arctic-Alpine Genus Diapensia (Diapensiaceae). PLoS One. Hou Y, Nowak MD, Mirré V, Bjorå CS, Brochmann C, Popp M.
2012 Thousands of missed genes found in bacterial genomes and their analysis with COMBRBiol Direct.EX. Biol Direct. Wood, D.E., Lin, H., Levy-Moonshine, A., Swaminathan, R., Chang, Y.C., Anton, B.P., Osmani, L., Steffen, M., Kasif, S. and Salzberg, S.L.
2008 The Wolbachia endosymbiont of Brugia malayi has an active phosphoglycerate mutase: a candidate target for anti-filarial therapies Parasitol. Res.  Foster, J.M., Raverdy, S., Ganatra, M.B., Colussi, P.A., Taron, C.H. and Carlow, C.K.S.
1996 Thermostable DNA Polymerases. Enzymes and Proteins from Hyperthermophilic Microorganisms, Advs.Protein Chemistry Perler, F.B., Kumar, S., and Kong, H.
1996 Thermostable Bst DNA polymerase I lacks a 3' fwdarw 5' proofreading exonuclease activity1. Genetic Analysis Biomolecular Engineering Aliotta, J.M., Pelletier, J.J., Ware, J.L., Moran, L.S., Benner, J.S., and Kong, H.
1994 Thermal cycle Dideoxy DNA Sequencing. Methods Mol.Biol. Slatko, B.E.
1996 Thermal cycle dideoxy DNA sequencing Methods Mol.Biol. Slatko, B.
1999 Thermal Asymmetric Interlaced PCR Amplification of YAC Insert End Fragments for Chromosome Walking in Plasmodium falciparum and Other A/T-Rich Genomes. BioTechniques Foster, J.M., Christodoulou, Z., Cowan, G.M.and Newbold, C.I.
2014 Therapeutic epitopes of Leptospira LipL32 protein and their characteristics Protein Eng Des Sel Maneewatch S, Adisakwattana P, Chaisri U, Saengjaruk P, Srimanote P, Thanongsaksrikul J, Sakolvaree Y, Poungpan P, Chaicumpa W Phage Display
1996 The XmnI Restriction-Modification System - Cloning, Expression, Sequence Organization And Similarity Between The R And M-Gene. Gene Nwankwo, D.O., Lynch, J.J., Moran, L.S., Fomenkov, A., and Slatko, B.E.
2013 The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosome Science Engreitz JM, Pandya-Jones A, McDonel P, Shishkin A, Sirokman K, Surka C, Kadri S, Xing J, Goren A, Lander ES, Plath K, and Guttman M
2005 The Wolbachia Genome of Brugia malayi: Endosymbiont Evolution within a Human Pathogenic Nematode. PLoS Biology Foster, J., Ganatra, M., Kamal, Ibrahim, Ware, J., Makarova, K., Ivanova, N., Bhattacharyya, A., Kapatral, V., Kumar, S., Posfai, J., Vincze, T., Ingram, J., Moran, L., Lapidus, A., Omelchenko, M., Kyrpides, N., Ghedin, E., Wang, S., Goltsman, E., Joukov, V., Ostrovskaya, O., Tsukerman, K., Mazur, M., Comb, D., Koonin, E.and Slatko, B.
1999 The Wolbachia Genome Consortium. Microbiol.and Comparative Genomics Slatko, B.E., O'Neill, S.L., Scott, A.L., Werren, J.L., Blaxter, M.L.and the Wolbachia genome Consortium
2008 The Wolbachia endosymbiont of Brugia malayi has an active pyruvate phosphate dikinase. Mol.Biochem.Parasitol. Raverdy, S., Foster, J.M., Roopenian, E.and Carlow, C.K.
2009 The Wolbachia endosymbiont of Brugia malayi has an active phosphoglycerate mutase: a candidate target for anti-filarial therapies. Parasitol.Res. Foster, J.M., Raverdy, S., Ganatra, M.B., Colussi, P.A., Taron, C.H.and Carlow, C.K.S.
2008 The Wolbachia endosymbiont of Brugia malayi has an active phosphoglycerate mutase: a candidate target for anti-filarial therapies. Parasitol.Res. Foster, J.M., Raverdy, S., Ganatra, M.B., Colussi, P.A., Taron, C.H.and Carlow, C.K.S.
2010 The Wolbachia endosymbiont as an anti-filarial nematode target. Symbiosis Slatko, B.E., Taylor, M.J.& Foster, J.M.
2008 The way forward, enhanced characterization of therapeutic antibody glycosylation: comparison of three level mass spectrometry-based strategies J. Chromatogr. B Analyt. Technol. Biomed. Life Sci. Wagner-Rousset, E., Bednarczyk, A., Bussat, M.C., Colas, O., Corvaïa, N., Schaeffer, C., Van Dorsselaer, A., Beck, A. Glycobiology
2001 The VP1-unique region of parvovirus B19: amino acid variability and antigenic stability J. Gen. Virol. Dorsch, S., et al.
2015 The use of museum specimens with high-throughput DNA sequen. J Hum Evol. Burrell AS, Disotell TR, Bergey CM.
1987 The Use of DNA Sequencing Reactions as Probes for Southern Blots, Dot Blots and Colony Hydridizations. BioTechniques Card, C.O., Williams, S.A., Moran, L.S., Poole, C.B., and Slatko, B.E.
1987 The use of DNA methylases to alter the apparent recognition specificities of restriction endonucleases. Methods Enzymol. Nelson, M., and Schildkraut, I.
2014 The uric acid transporter SLC2A9 is a direct target gene of the tumor suppressor p53 contributing to antioxidant defense Oncogene Itahana Y, Han R, Barbier S, Lei Z, Rozen S, Itahana K Glycobiology
1997 The Tsp45I restriction-modification system is plasmid-borne within its thermophilic host. Gene Wayne, J., Holden, M., and Xu, S.Y.
2012 The Thermococcus kodakaraensis Tko CDC21-1 intein activates its N-terminal splice junction in the absence of a conserved histidine by a compensatory mechanism Biochemistry Tori, K., Cheriyan, M., Pedamallus, C.S., Contreras, M.A. and Perler, F.B.
2010 The tetrahymena argonaute-binding protein Giw1p directs a mature argonaute-siRNA complex to the nucleus Cell Noto, T., Kurth, H., Kataoka, K., Aronica, L., DeSouza, L., Siu, K., Pearlman, R., Gorovsky, M. and Mochizuki, K.
2008 The symbiotic relationship between filarial parasitic nematodes and their wolbachia endosymbionts - a resource for a new generation of control measures. Symbiosis Ghedin, E., Daehnel, K., Foster, J., Slatko, B.and Lustigman S.
2008 The structure of SgrAI bound to DNA; recognition of an 8 base pair target. Nucl.Acids.Res. Dunten, P.W., Little, E.J., Gregory, M.T., Manohar, V.M., Dalton, M., Hough, D., Bitinaite, J., Horton, N.C.
2014 The Serine-Threonine Protein Kinase PAK4 Is Dispensable in Zebrafish: Identification of a Morpholino-Generated Pseudophenotype PLoS One Law SH, Sargent TD Gibson Assembly®
2001 The sequence of the human genome Science Venter, J.C., Roberts, R.J.et al.
2015 The RpoE Stress Response Pathway Mediates Reduction of the Virulence of Enteropathogenic Escherichia coli by Zinc. Appl Environ Microbiol Yuan Xue, Jossef Osborn, Anand Panchal, Jay L Mellies High-Fidelity PCR
2015 The roles of family B and d DNA polymerases in thermococcus species 9 degrees n okazaki fragment maturation J Biol Chem. Greenough, L., Kelman, Z. and Gardner, A.F.
2006 The role of Wolbachia in the biology and pathogenesis of filariasis Insect Symbiosis Turner, J., Foster, J., Ganatra, M., Slatko, B.and Taylor, M.
2013 The role of the methyltransferase domain of bifunctional restriction enzyme RM.BpuSI in cleavage activity PLOS ONE Sarrade-Loucheur, A., Xu, S-Y. and Chan, S-H.
2006 The role of single N-glycans in proteolytic processing and cell surface transport of the Lassa virus glycoprotein.GP-C. Virol. J. Eichler, R., Lenz, O., Garten, W., Strecker, T.
2010 The role of elF1 in translation initiation codon solection in Caenorhabditis elegans. Genetics Maduzia, L.L., Moreau, A., Poullet, N., Chaffre, S.and Zhang, Y.
2003 The role of C-terminal tyrosine phosphorylation in the regulation of SHP-1 explored via expressed protein ligation J. Biol. Chem. Zhang, Z., et al.
2014 The role of an asymmetrically inherited endosymbiont in robust establishment of host embryonic polarity PLoS Negl. Trop. Dis Landmann, F., Foster, J.M., Michalski, S., Slatko, B., Sullivan, W.
2015 The ribosome quality control pathway can access nascent polypeptides stalled at the Sec61 translocon Mol Biol Cell Malsburg K., Shao S., Hegde RS.
2002 The retinoblastoma gene product interacts with maintenance human DNA (Cytosine-5) methyltransferase and modulates its activity. EMBO J. Pradhan, S.and Kim, G.-D.
1993 The Restriction Enzymes Nucleases Roberts, R.J.and Macelis, D.
2008 The relative contribution of mannose salvage pathways to glycosylation in PMI-deficient mouse embryonic fibroblast cells FEBS J.  Fujita, N., Tamura, A., Higashidani, A., Tonozuka, T., Freeze, H.H., Nishikawa, A.
1995 The regulatory C proteins from different restriction-modification systems can cross-complement. J.Bacteriol. Ives, C.L., Sohail, A., and Brooks, J.E.
1993 The Polyprotien Allergens of Nematodes. Parasitol.Today McReynolds, L.A., Kennedy, M.W., and Selkirk, M.E.
2014 The other face of restriction: modification-dependent enzymes. Nucleic Acids Res Loenen, W.A., Raleigh, E.A. Restriction Enzyme Digestion,Restriction Enzyme Digestion
2013 The other face of restriction: modification-dependent enzymes Nucleic Acids Research Wil A. M. Loenen, Elisabeth A. Raleigh
2014 The other face of restriction: modification-dependent enzymes Nucleic Acids Res. Loenen, W.A.M. and Raleigh, E.A.
2013 The oil palm SHELL gene controls oil yield and encodes a homologue of SEEDSTICK Nature Singh R, Low ET, Ooi LC, Ong-Abdullah M, Ting NC, Nagappan J, Nookiah R, Amiruddin MD, Rosli R, Manaf MA, Chan KL, Halim MA, Azizi N, Lakey N, Smith SW, Budiman MA, Hogan M, Bacher B, Van Brunt A, Wang C, Ordway JM, Sambanthamurthi R, Martienssen RA Gibson Assembly®
2010 The nucleoporin Nup188 controls passage of membrane proteins across the nuclear pore complex  J. Cell Biol.  Theerthagiri, G., Eisenhardt, N., Schwarz, H. and Antonin, W.
1999 The Nuclear Receptor Superfamily Has Undergone Extensive Proliferation and Diversification in Nematodes. Genome Res. Sluder, A.E., Mathews, S.W., Hough, D., Yin, V.P.and Maina, C.V.
2001 The nicking endonuclease N.BstNBI is closely related to Type IIs restriction endonucleases MlyI and PleI. Nucl.Acids Res. Higgins, L.S., Besnier, C.and Kong H.
2014 The N-terminal domain modulates α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) receptor desensitization J Biol Chem Möykkynen T, Coleman SK, Semenov A, Keinänen K Glycobiology
2006 The N terminus of GTP gamma S-activated transducin alpha-subunit interacts with the C terminus of the cGMP phosphodiesterase gammasubunit J. Biol. Chem.  Grant, J., et al.
1997 The Mycobacterium xenopi GyrA Protein Splicing Element: Characterization of a Minimal Intein. J.Bacteriol. Telenti, A., Southworth, M., Alcaide, F., Aauglat, S., Jacobs Jr., W.R., and Perler, F.B.
2011 The MspJI family of modification-dependent restriction endonucleases for epigenetic studies. Proc.Natl.Acad.Sci. Cohen-Karni, D., Xu, D., Apone, L., Formenkov, A., Sun, Z., Davis, P.J., Morey Kinney, S.R., Yamada-Mabuchi, M., Xu, S.-y., Davis, T., Pradhan, S.Roberts, R.J., Zheng, Y.
2011 The MspJI family of modification-dependent restriction endonucleases for epigenetic studies Proc. Natl. Acad. Sci. Cohen-Karni, D, et al.
2015 The mRNA decay factor PAT1 functions in a pathway including MAP kinase 4 and immune receptor SUMM2 Roux, M.E., Rasmussen, M.W., Palma, K., Lolle, S., Regue, A.M., Bethke, G., Glazebrook, J., Zhang, W., Sieburth, L., Larsen, M.R., Mundy, J., Petersen, M.
2013 The Molecular Biology, Immunology and Chemotherapy of Wolbachia Bacterial Endosymbionts of Filarial Nematodes Parasitic Namatodes: Molecular Biology, Biochemistry, Immunology Foster, J.M., Hoerauf, A., Slatko, B.E. and Taylor, M.J.
2009 The MmeI Family: Type II Restriction-Modificaton Enzymes That Employ Single-Strand Modification for Host Protection. Nucl.Acids.Res. Morgan, R.D., Dwinell, E.A., Bhatia, T.K., Lang, E.M.and Luyten, Y.A.
2016 The Microbiome of Aseptically Collected Human Breast Tissue in Benign and Malignant Disease Sci Rep. Hieken, T.J. et al.
2012 The methylomes of six bacteria Nucleic Acids Res. Murray, I.A., Clark, T.A., Morgan, R.D., Boitano, M., Anton, B.P., Luong, K., Fomenkov, A., Turner, S.W., Korlach, J. and Roberts, R.J.
2005 The mechanisms of intein-mediated protein splicing: variations on a theme. IUBMB Life Mills, K.V.and Perler, F.B.
2002 The mechanism of protein splicing: variations on a theme. Peptides: Proceedings of the Twnety-Seventh European Peptide Symposium Perler, F.B., Chen, L.and Southworth, M.W.
1996 The mechanism of protein splicing and its modulation by mutation. EMBO J. Xu, M.Q., and Perler, F.B.
1999 The McrBC Endonuclease Translocates DNA in a Reaction Dependent on GTP Hydrolysis. J.Mol.Biol. Panne, D., Raleigh E.A.and Bickle, T.A.
1998 The Maltoxe-Binding Protein as a Scaffold for Monovalent Display of Peptides Derived from Phage Libraries. Anal.Biochem. Zwick, M.B., Bonnycastle, L.L.C., Noren, K.A., Venturini, S., Leong, E., Barbas, C.F., Noren, C.J.and Scott, J.K.
1993 The M.AluI DNA-(cytosine C5)-methyltransferse has an unusually large, partially dispensable, variable region. Nucl.Acids Res. Zhang, B., Tao, T., Wilson, G.G., and Blumenthal, R.M.
2000 The LipB protein is a negative regulator of dam gene expression in Escherichia coli. Biochim.Biophys.Acta. Vaisvila, R., Rasmussen, L.J., Lobner-Olsen, A., von Freisleben, U.and Marinus, M.G.
2007 The level of synthesis and secretion of Gaussia princeps luciferase in transfected CHO cells is heavily dependent on the choice of signal peptide J. Biotechnol Knappskog, S., Ravneberg, H., Gjerdrum, C., Trosse, C., Stern, B., and Pryme I.F.
The level of synthesis and secretion of Gaussia princeps
2009 The Krüppel-like zinc finger protein Glis3 directly and indirectly activates insulin gene transcription  Nucleic Acids Res. adr, C.E., Hewett, J.W., Breakefield, X.O. and Tannous, B.A.
2009 The Kruppel-like zinc finger protein Glis3 directly and indirectly activates insulin gene transcription Nucleic Acids Res. Yang, Y., Chang, B.H., Samson, S.L., Li, M.V., Chan, L.
1999 The kinetic mechanism of EcoRI endonuclease. J.Biol.Chem. Wright, D.J., Jack, W.E.and Modrich P.
2004 The isolation of strand-specific nicking endonucleases from a randomized SapI expression library. Nucl.Acids Res. Samuelson, J.C., Zhu, Z.and Xu, S.Y.
1983 The isolation and characterization of the Escherichia coli DNA adenine methylase (dam) gene Nucleic Acids Res. Brooks, J.E., Blumenthal, R.M., Gingeras, T.R.
2004 The ins and outs of gene expression control. Nat.Biotechnol. Perler, F.B.
2016 The Inhibitory Effect of Non-Substrate and Substrate DNA on the Ligation and Self-Adenylylation Reactions Catalyzed by T4 DNA Ligase. PLoS One Bauer, R.J., Evans, T.C. Jr. and Lohman, G.J.
1999 The in Vitro Ligation of Bacterially Expressed Proteins Using an Intein from Methanobacterium thermoautotrophicum. J.Biol.Chem. Evans, T.C., Benner, J.and Xu, M-Q
1990 The identification of an Onchocerca-specific recombinant antigen containing a T cell epitope. J Immunol. Colina, K.F., Perler, F.B., Matsumura, I., Meda, M., and Nutman, T.B.
1994 The I-CeuI endonuclease: purification and potential role in the evolution of Chlamydomonas group I introns. Eur. J. Biochem Marshall, P., Davis, T.B., Lemieux,C.
2010 The human proteins MBD5 and MBD6 associate with heterochromatin but they do not bind methylated DNA PLoS One Laget, S., et al.
2009 The Heme Biosynthetic Pathway of the Obligate Wolbachia Endosymbiont of Brugia malayi as a Potential Anti-filarial Drug Target. PLoS Negl Trop Dis Wu, B., Novelli, J., Foster, J., Vaisvila, R., Conway, L., Ingram, J., Ganatra, M., Rao, A.U., Hamza, I.and Slatko, B.
2013 The haplotype-resolved genome and epigenome of the aneuploid HeLa cancer cell line Nature Adey, A. et al.
2013 The genetic code constrains yet facilitates Darwinian evolution Nucleic Acids Res Firnberg E, Ostermeier M
2017 The GAN exonuclease, or the flap endonuclease Fen1 and RNase HII are necessary for viability of Thermococcus kodakarensis J. Bacteriol Burkhart, B.W., Cubonova, L., Heider, M.R., Kelman, Z., Reeve, J.N., Santangelo, T.J.
2013 The Formin Daam1 and Fascin Directly Collaborate to Promote Filopodia Formation Current Biology  Jaiswal, R., Breitsprecher, D., Collins, A., Correa, I.R., Jr., Xu, M.-Q. and Goode, B.L.
2015 The foles of family B and d DNA polymerases in thermococcus species 9 degrees n okazaki fragment maturation J Biol Chem Greenough, L., Kelman, Z. and Gardner, A.F.
2013 The First Identification and Retrospective Study of Severe Fever With Thrombocytopenia Syndrome in Japan The Journal of Infectious Diseases Toru Takahashi, Ken Maeda, Tadaki Suzuki, Aki Ishido, Toru Shigeoka, Takayuki Tominaga, Toshiaki Kamei, Masahiro Honda, Daisuke Ninomiya, Takenori Sakai, Takanori Senba, Shozo Kaneyuki, Shota Sakaguchi, Akira Satoh, Takanori Hosokawa, Yojiro Kawabe, Shintaro Kurihara, Koichi Izumikawa, Shigeru Kohno, Taichi Azuma, Koichiro Suemori, Masaki Yasukawa, Tetsuya Mizutani, Tsutomu Omatsu, Yukie Katayama, Masaharu Miyahara, Masahito Ijuin, Kazuko Doi, Masaru Okuda, Kazunori Umeki, Tomoya Saito, Kazuko Fukushima, Kensuke Nakajima, Tomoki Yoshikawa, Hideki Tani, Shuetsu Fukushi, Aiko Fukuma, Momoko Ogata, Masayuki Shimojima, Noriko Nakajima, Noriyo Nagata, Harutaka Katano, Hitomi Fukumoto, Yuko Sato, Hideki Hasegawa, Takuya Yamagishi, Kazunori Oishi, Ichiro Kurane, Shigeru Morikawa, Masayuki Saijo
2004 The first amendment and scientific freedom in the era of bioterrorism. J.Biolaw and Business Anton, B.P.
2000 The filarial genome project: analysis of the nuclear, mitochondrial and endosymbiont genomes of Brugia malayi. Int.J.Parasitol. Williams, S.A., Lizotte-Waniewski, M.R., Foster, J., Guiliano, D., Daub, J., Scott, A.L., Slatko, B.and Blaxter, M.L.
2008 The fidelity Index provides a systematic quantitation of star activity of DNA restriction endonucleases. Nucl.Acids.Res. Wei, H., Therrien, C., Blanchard, A., Guan, S.and Zhu, Z.
2015 The evolutionary history of the embiotocid surfperch radiation based on genome-wide RAD sequence data. Mol Phylogenet Evol. Longo G, Bernardi G.
1980 The Evolution of Genes: the Chicken Preproinsulin Gene Cell Perler, F.B.and Efstratiadis, A.
2013 The Evolution of Genes: the Chicken Preproinsulin Gene Cell Perler, F.B.and Efstratiadis, A.
2016 The Epigenomic Landscape of Prokaryotes. PLoS Genet. Blow, M.J., Clark, T.A., Daum, C.G., Deutschbauer, A.M., Fomenkov, A., Fries, R., Froula, J., Kang, D.D., Malmstrom, R.R., Morgan, R.D., Posfai, J., Singh, K., Visel, A., Wetmore, K., Zhao, Z., Rubin, E.M., Korlach, J., Pennacchio, L.A. and Roberts, R.J.
2001 The Energetics of the Interaction of BamHI Endonuclease with its Recognition Site GGATCC. J.Mol.Biol. Engler, L.E., Sapienza, P., Dorner, L.F., Kucera, R., Schildkraut, I.and Jen-Jacobson, L.
2016 The endoplasmic reticulum: structure, function and response to cellular signaling Cell Mol Life Sci. Schwarz, D.S., Blower, M.D.
2000 The efficiency of Escherichia coli selenocysteine insertion is influenced by the immediate downstream nucleotide. Nucl.Acids Res. Sandman, K.E.and Noren, C.J.
1987 The effect of site-specific methylation on restriction-modification enzymes. Nucl.Acids Res. Nelson, M., and McClelland, M.
1985 The effect of site specific methylation on restriction endonuclease digestion. Nucl.Acids Res. McClelland, M., and Nelson, M.
2009 The effect of carbon source on the secretome of Kluyveromyces lactis Proteomics Madinger, C.L., Sharma, S.S., Anton, B.P., Fields, L.G., Cushing, M.L., Canovas, J., Taron, C.H. and Benner, J.S.
2009 The effect of carbon source on the secretome of Kluyveromyces lactis. Proteomics Madinger, C.L., Sharma S.S., Anton, B.P., Fields, L.G., Cushing, M.L., Canovas, J., Taron, C.H., and Benner, J.S.
2000 The early days of bioinformatics publishing Bioinformatics Roberts, R.J.
1994 The DNA (cytosine-5) methyltransferases. Nucl.Acids Res. Kumar, S., Cheng, X., Klimasauskas, S., Sha, M., Posfai, J., Roberts, R.J., and Wilson, G.G.
2015 The diversity of Bet v 1-specific IgG4 antibodies remains mostly constant during the course of birch pollen immunotherapy J Allergy Clin Immunol Subbarayal B., Schiller D., Möbs C., Pfützner W., Jahn-Schmid B., Gepp B., Breiteneder H., Vieths S., Bohle B.
2010 The Deinococcus radiodurans Snf2 intein caught in the act: Detection of the Class 3 intein signature Block F.branched intermediate. Protein Sci. Brace, L.E., Southworth, M.W., Tori, K., Cushing, M.L.and Perler, F.
2010 The de novo cytosine methyltransferase DRM2 requires intact UBA domains and a catalytically mutated paralog DRM3 during RNA-directed DNA methylation in Arabidopsis thaliana PLoS Genet. Henderson, I.R., Deleris, A., Wong, W., Zhong, X.H., Chin, H.G., Horwitz, G.A., Kelly, K.A., Pradhan, S., Jacobsen, S.E.
1999 The Cyclization and Polymerization of Bacterially Expressed Proteins Using Modified Self-splicing Inteins. J.Biol.Chem. Evans, T.C., Benner, J.and Xu, M-Q
1992 The corrected nucleotide sequences of the TaqI restriction and modification enzymes reveal a thirteen-codon overlap. Gene Barany, F., Slatko, B., Danzitz, M., Cowburn, D., Schildkraut, I., and Wilson, G.G.
2013 The complex methylome of the human gastric pathogen Helicobacter pylori Nucleic Acids Research Juliane Krebes, Richard D. Morgan, Boyke Bunk, Cathrin Spröer, Khai Luong, Raphael Parusel, Brian P. Anton, Christoph König, Christine Josenhans, Jörg Overmann, Richard J. Roberts, Jonas Korlach, Sebastian Suerbaum
2014 The complex methylome of the human gastric pathogen Helicobacter pylori Nucleic Acids Res Krebes J, Morgan RD, Bunk B, Spröer C, Luong K, Parusel R, Anton BP, König C, Josenhans C, Overmann J, Roberts RJ, Korlach J, Suerbaum S
2015 The complete methylome of Helicobacter pylori UM032 BMC Genomics Lee, W.C., Anton, B.P., Wang, S., Baybayan, P., Singh, S., Ashby, M., Chua, E.G., Tay, C.Y., Thirriot, f., Loke, M.F., Goh, K.L., Marshall, B.J., Robert, R.J. and Vadivelu, J.
2009 The complete genome of Teredinibacter turnerae T7901: an intracellular endosymbiont of marine wood-boring bivalves (shipworms). PLoS ONE Yang, J.C., Madupu, R., Durkin, A.S., Ekborg, N.A., Pedamallu, C.S., Hostetler, J.B., Radune, D., Toms, B.S., Henrissat, B., Coutinho, P.M., Schwarz, S., Field, L., Trindade-Silva, A.E., Soares, C.A., Elshahawi, S., Hanora, A., Schmidt, E.W., Haygood, M.G., Posfai, J., Benner, J., Madinger, C., Nove, J., Anton, B., Chaudhary, K., Foster, J., Holman, A., Kumar, S., Lessard, P.A., Luyten, Y.A., Slatko, B., Wood, N., Wu, B., Teplitski, M., Mougous, J.D., Ward, N., Eisen, J.A., Badger, J.H.and Distel, D.L.
2013 The COMBREX project design methodology and initial results PLOS ONE Anton BP, Chang YC, Brown P, Choi HP, Faller LL, Guleria J, Hu Z, Klitgord N, Levy-Moonshine A, Maksad A, Mazumdar V, McGettrick M, Osmani L,Pokrzywa R, Rachlin J, Swaminathan R, Allen B, Housman G, Monahan C, Rochussen K, Tao K, Bhagwat AS, Brenner SE, Columbus L, de Crécy-Lagard V, Ferguson D, Fomenkov A, Gadda G, Morgan RD, Osterman AL, Rodionov DA, Rodionova IA, Rudd KE, Söll D, Spain J, Xu SY, Bateman A,Blumenthal RM, Bollinger JM, Chang WS, Ferrer M, Friedberg I, Galperin MY, Gobeill J, Haft D, Hunt J, Karp P, Klimke W, Krebs C, Macelis D, Madupu R, Martin MJ, Miller JH, O'Donovan C, Palsson B, Ruch P, Setterdahl A, Sutton G, Tate J, Yakunin A, Tchigvintsev D, Plata G, Hu J, Greiner R, Horn D,Sjölander K, Salzberg SL, Vitkup D, Letovsky S, Segrè D, DeLisi C, Roberts RJ, Steffen M, Kasif S.
2014 The CLO3403/CLO3404 Two-Component System of Clostridium botulinum E1 Beluga Is Important for Cold Shock Response and Growth at Low Temperatures Appl Environ Microbiol Mascher G, Derman Y, Kirk DG, Palonen E, Lindström M, Korkeala H
1987 The cleavage site for the restriction endonucleases BanI and HgiCI is 5' ...G^GPyPuCC ...3'. Nucl.Acids Res. Schildkraut, I., Lynch, J., and Morgan, R.
1984 The cleavage site for the restriction endonuclease EcoRV is 5'-GAT^ATC-3'. Gene Schildkraut, I., Banner, C.D.B., Rhodes, C.S., and Parekh, S.
2005 The chitin synthase genes chs-1 and chs-2 are essential for C.elegans development and responsible for chitin deposition in the eggshell and pharynx, respectively. Dev.Biol. Zhang, Y., Foster, J.M., Nelson, L.S., Ma, D.and Carlow C.K.S.
2011 The characterization of human adenylate kinases 7 and 8 demonstrates differences in kinetic parameters and structural organization among the family of adenylate kinase isoenzymes Biochem J.  Panayiotou, C., Solaroli, N., Xu, Y., Johansson, M. and Karlsson, A.
1988 The characterization and cloning of the NotI restriction-modification system Heredity Sznyter, L.A., Brooks. J.E.
1988 The characterization and cloning of the EagI restriction-modification system. Gene Sznyter, L.A., and Brooks, J.E.
2008 The Caenorhabditis elegans NR4A nuclear receptor is required for spermatheca morphogenesis. Dev.Biol. Gissendanner, C.R., Kelley, K., Nguyen, T.Q., Hoener, M.C., Sluder, A.E.and Maina, C.V.
2008 The BsaHI restriction-modification system: Cloning, sequencing and characterisation of DNA recognising motifs. BMC Molecular Biology Neely, R.K.and Roberts, R.J.
2004 The bacterial catalase from filarial DNA preparations derives from common pseudomonad contaminants and not from Wolbachia endosymbionts. Parasitol.Res. Foster, J., Baldo, L., Blaxter, M., Hendle-Duhrsen, K., Whitton, C., Slatko, B.and Bandi, C
2011 The Arthrobacter Species FB24 Arth_1007 (DnaB) Intein Is a Pseudogene. PLoS ONE Tori, K.and Perler, F.B.
2009 The apearance of pyrrolysine in tRNAHis guanylyltransferase by neutral evolution. Proc.Natl.Acad.Sci.USA Heinemann, I.U., O'donoghue, P., Madinger, C., Benner, J., Randau, L., Noren, C.J.and Soll, D.
1988 The Amino Acid Sequence of the Eukaryotic DNA [N6-adenine] Methyltransferase, M-CviBIII, Has Regions of Similarity With the Prokaryotic Isoschizomer M-TaqI and Other DNA [N6-adenine] Methyltransferases. Gene Narva, K.E., Van Etten, J.L., Slatko, B.E.and Benner, J.S.
2014 The ambrosia symbiosis is specific in some species and promiscuous in others: evidence from community pyrosequencing. ISME J Martin Kostovcik, Craig C Bateman, Miroslav Kolarik, Lukasz L Stelinski, Bjarte H Jordal, Jiri Hulcr High-Fidelity PCR
2017 The advantages of SMRT™ sequencing.  Genome Biology Roberts, R.J., Carneiro, M.O., Schatz, M.C.
2001 The activity of the murine DNA methyltransferase Dnmt1 is controlled by interaction of the catalytic domain with the N-terminal part of the enzyme leading to an allosteric activation of the enzyme after binding to methylated DNA J. Mol. Biol. Fatemi, M., Hermann, A., Pradhan, S., Jeltsch, A.
1994 The 'endo-blue method' for direct cloning of restriction endonuclease genes in E.coli. Nucl.Acids Res. Fomenkov, A., Xiao, J.P., Dila, D., Raleigh, E., and Xu, S.Y.
2015 Terminal Mannose Residues in Seminal Plasma Glycoproteins of Infertile Men Compared to Fertile Donors Int J Mol Sci Beata O., Jarząb A., Kratz E., Zimmer M., Gamian A., Ferens-Sieczkowska M.
2015 Ten simple rules to win a nobel prize Roberts, R.J.
2013 Ten eleven translocation enzymes and 5-hydroxymethylation in mammalian development and cancer Adv Exp Med Biol Kinney, S.R. and Pradhan, S.
2008 Templated protein assembly on micro-contact-printed surface patterns. Use of the SNAP-tag protein functionality  Langumuir Iversen L. et al.
2008 Template-Independent DNA Polymerases. Curr.Protoc.Mol.Biol. Yue, D., Tabor, S.and Nichols, N.M.
1996 Teaching About Science Accountability in Research Roberts, R.J.
2016 Taxonomer: an interactive metagenomics analysis portal for universal pathogen detection and host mRNA expression profiling Genome Biology Flygare, S. et al.
2007 Tasting Phenylthiocarbamide (PTC): A New Lab With an Old Flavor. Am.Biol.Teacher Merritt, R., Bierwort, L., Slatko, B., Weiner, M., Weiner, E., Ingram, J.and Sciarra, K.
2008 Tasting Phenylthiocarbamide (PTC): A New Lab With an Old Flavor. Am.Biol.Teacher Merritt, R., Bierwort, L., Slatko, B., Weiner, M., Weiner, E., Ingram, J.and Sciarra, K.
2011 Targeting the Wolbachia Cell Division Protein FtsZ as a New Approach for Antifilarial Therapy. PLoS Neglected Tropical Diseases Li, Z., Garner, A.L., Gloeckner, C., Janda, K.D.and Carlow, C.K.
2009 Targeting of tumor blood vessels: a phage-displayed tumor-homing peptide specifically binds to matrix metalloproteinase-2-processed collagen IV and blocks angiogenesis in vivo Mol. Cancer Res. Mueller, J. et al.
Targeting of tumor blood vessels
2010 Targeting of embryonic stem cells by peptide-conjugated quantum dots PLoS One Lu, S. et al.
2008 Targeting DNA (5)mCpG sites with chimeric endonucleases. Anal.Biochem. Formenkov, A., Too, P.H., Chan, S.H., Vaisvila, R., Cantin, B.A., Mazzola, L., Tam, V.and Xu, S.Y.
2011 Targeting choroid plexus epithelia and ventricular ependyma for drug delivery to the central nervous system BMC Neurosci Gonzalez, A.M. et al. Phage Display
2010 Targeted photoswitchable probe for nanoscopy of biological structures ChemBioChem Dellagiacoma, C. et al.
2008 Targeted nanoparticles for imaging incipient pancreatic ductal adenocarcinoma PLoS Med. Kelly, K.A. et al.
2015 Targeted Glycoengineering Extends the Protein N-glycosylation Pathway in the Silkworm Silk Gland Sci Rep Asazuma HM., Sohn BH., Kim Y.S., Kuo CW., Khoo KH., Kucharski CA., Fraser MJ., Jarvis DL.
2012 Targeted genome enrichment for efficient purification of endosymbiont DNA from host DNA Symbiosis Geniez, S., Foster, J.M., Kumar, S., Moumen, B., Leproust, E., Hardy, O., Guadalupe, M., Thomas, S.J., Boone, B., Hendrickson, C., Bouchon, D., Greve, P and Slatko, B.E.
2017 Targeted enrichment and sequencing of recent endosymbiont-host lateral gene transfers Sci Rep. Dunning Hotopp, J.C., Slatko, B.E., Foster, J.M.
2013 Targeted drug delivery systems mediated by a novel peptide in breast cancer therapy and imaging PLoS One Lu, R.-M. et al Phage Display
2013 Targeted delivery of proapoptotic peptides to tumor-associated macrophages improves survival Proc. Natl. Acad. Sci. Cieslewicz, M. et al Phage Display
2015 TALEN-mediated targeting of HPV oncogenes ameliorates HPV-related cervical malignancy. J Clin Invest Zheng Hu, Wencheng Ding, Da Zhu, Lan Yu, Xiaohui Jiang, Xiaoli Wang, Changlin Zhang, Liming Wang, Teng Ji, Dan Liu, Dan He, Xi Xia, Tao Zhu, Juncheng Wei, Peng Wu, Changyu Wang, Ling Xi, Qinglei Gao, Gang Chen, Rong Liu, Kezhen Li, Shuang Li, Shixuan Wang, Jianfeng Zhou, Ding Ma, Hui Wang Genome Editing
2009 Tag-probe labeling methods for live-cell imaging of membrane proteins Biochim. Biophys. Acta. Uano Y. and Matsuzaki K.
2011 T4 RNA ligase 2 truncated active site mutants: improved tools for RNA analysis. BMC Biotechnol. Viollet, S., Fuchs, R.T., Munafo, D.B., Zhuang, F.and Robb, G.B.
2007 Synthetic analogues of glycosylphosphatidylinositol-anchored proteins and their behavior in supported lipid bilayers J. Am. Chem. Soc. Paulick, M. G., et al.
2007 Synthesis of Polyester by Means of Genetic Code Reprogramming Chem. Biol. Ohta, A., Murakami, H., Higashimura, E., and Suga, H.
2004 Synthesis of fluorescently labeled mono- and diprenylated Rab7 GTPase J. Am. Chem. Soc. Durek, T., et al.
2006 Synthesis and evaluation of the bioluminescent activity of (S)-Cypridina luciferin and its analogs Tetrahedron Letters Wu, C., Kawasaki, K., Ohgiya, S., Ohmiya, Y.
2004 Synthesis and characterization of bifunctional probes for the specific labeling of fusion proteins Bioorg. Med. Chem. Lett. Kindermann M. et al.
2006 Syntheses and evaluation of the bioluminescent activity of (S)-Cypridina luciferin and its analogs Tetrahedron Letters Wu, C., Kawasaki, K., Ohgiya.S. and Ohmiya, Y.
2015 Sul1 and Sul2 Sulfate Transceptors Signal to Protein Kinase A upon Exit of Sulfur Starvation. J Biol Chem Harish Nag Kankipati, Marta Rubio-Texeira, Dries Castermans, George Diallinas, Johan M Thevelein High-Fidelity PCR
2008 Subunit-specific surface mobility of differentially labeled AMPA receptor subunits Eur. J. Cell Biol. Kropf M. et al.
2007 Subtilisin-like proteases in nematodes. Mol.Biochem.Parasitol. Poole, C.B., Jin, J.and McReynolds, L.A.
2013 Substrates for Improved Live-Cell Fluorescence Labeling of SNAP-tag Current Pharmaceutical Design Ivan R. Corrêa Jr, Brenda Baker, Aihua Zhang, Luo Sun, Christopher R. Provost, Grazvydas Lukinavicius, Luc Reymond, Kai Johnsson, and Ming-Qun Xu
2004 Substrate specificity and kinetic mechanism of mammalian G9a histone H3 methyltransferase. J.Biol.Chem. Patnaik, D., chin, H.G., esteve, P.O., Benner, J., Jacobsen, S.E.and Pradhan, S.
1997 Substrate DNA and cofactor regulate the activities of a multi-functional restriction-modification enzyme, Bcgl. Nucl.Acids Res. Kong, H., and Smith, C.L.
2012 Substrate cooperativity in marine luciferases PLoS One Tzertzinis, G., Schildkraut, E., and Schildkraut, I.
2012 Substrate cooperativity in marine luciferases PLoS One Tzertzinis, G., Schildkraut, E. and Schildkraut, I.
2003 Study of protein splicing and intein-mediated peptide bond cleavage under high-cell-density conditions. Biotechnol.Prog. Sharma, S., Zhang, A., Wang, H., Harcum, S.W.and Chong S.
2012 Stucture and cleavage activity of the tetrameric MspJI DNA modification-dependent restriction endonuclease. Nucleic Acids Research Horton, J.R., Mabuchi, M., Cohen-Karni, D., Zhang, X., Griggs, R., Samaranayake, M., Roberts, R.J., Zheng, Y. and Cheng, X.
2008 Structures of the rare-cutting restriction endonuclease NotI reveal a unique metal binding fold involved in DNA binding. Structure Lambert, A.R., Sussman, D., Shen, b., Maunus, R., Nix, J., Samuelson, J., Xu, S.Y.and Stoddard, B.L.
1998 Structures of HhaI methyltransferase complexed with substrates containing mismatches at the target base. Nature Struct.Biol. O'Gara, M., Horton, J.R., Roberts, R.J.and Cheng, X.
1999 Structures of a Binary Complex of HhaI Methyltransferase with S-adenosyl-L-methionine Formed in the Presence of a Short Non-specific DNA Oligonucleotide. J.Mol.Biol. O'Gara, M., Zhang, X., Roberts, R.J.and Cheng, X.
2012 Structure-function analysis of Methanobacterium thermoautotrophicum RNA ligase - engineering a thermostable ATP independent enzyme BMC Mol Biol. Zhelkovsky, A.M. and McReynolds, L.A.
2016 Structure of Type IIL Restriction-Modification Enzyme MmeI in Complex with DNA Has Implications for Engineering New Specificities. PLoS Biol. Callahan, S.J., Luyten, Y.A., Gupta, Y.K., Wilson, G.G., Roberts, R.J., Morgan, R.D. and Aggarwal, A.K.
2014 Structure of the Trehalose-6-phosphate Phosphatase from Brugia malayi Reveals Key Design Principles for Anthelmintic Drugs PLoS Pathog Farelli JD, Galvin BD, Li Z, Liu C, Aono M, Garland M, Hallett OE, Causey TB, Ali-Reynolds A, Saltzberg DJ, Carlow CK, Dunaway-Mariano D, Allen KN
2004 Structure of the Q237W mutant of HhaI DNA methyltransferase: An insight into protein-protein interactions. Biol.Chem. Dong, A., Zhou, L., Zhang, X., Stickel, S., Roberts, R.J.and Cheng, X.
1997 Structure of the Multimodular Endonuclease FokI Bound to DNA. Nature Wah, D.A., Hirsch, J.A., Dorner, L.F., Schildkraut, I., Aggarwal, A.K.
2003 Structure of the large FK506-binding protein FKBP51, an Hsp90-binding protein and a component of steroid receptor complexes Proc. Natl. Acad. Sci. USA Sinars, C.R., et al.
1994 Structure of restriction endonuclease BamHI phased at 1.95 A resolution by MAD analysis. Structure Newman, M., Strzelecka, T., Dorner, L.F., Schildkraut, I., and Aggarwal, A.K.
1994 Structure of restriction endonuclease BamHI and its relationship to EcoRI. Nature Newman, M., Strzelecka, T., Dorner, L.F., Schildkraut, I., and Aggarwal, A.K.
2003 Structure of Rab GDP-dissociation inhibitor in complex with prenylated YPT1 GTPase Science Rak, A., et al.
1994 Structure of PvuII endonuclease with cognate DNA. EMBO J. Cheng, X., Balendiran, K., Schildkraut, I., and Anderson, J.E.
2015 Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA. Nucleic Acids Res Hashimoto H, Pais JE, Dai N, Corrêa IR Jr, Zhang X, Zheng Y, Cheng X.
2005 Structure of HinP1I endonuclease reveals a striking similarity to the monomeric restriction enzyme MspI. Nucl.Acids.Res. Yang, Z., Horton, J.R., Maunus, R., Wilson, G.G., Roberts, R.R.and Cheng, X.
1998 Structure of FokI has Implications for DNA Cleavage. Proc.Natl.Acad.Sci.USA Wah, D.A., Bitinaite, J., Schildkraut, I., Aggarwal, A.K.
1995 Structure of BamHI endonuclease bound to DNA: partial folding and unfolding on DNA binding. Science Newman, M., Strzelecka, T., Dorner, L.F., Schildkraut, I., and Aggarwal, A.K.
2002 Structure of a tRNA Repair Enzyme and Molecular Biology Workhorse: T4 Polynucleotide Kinase. Structure Galburt, E.A., Pelletier, J., Wilson, G.and Stoddard, B.L.
2013 Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNA Nature Hashimoto, H., Pais, J.E., Zhang, X., Saleh, L., Qing Fu, Z., Dai, N., Correa, I.R. Jr., Zheng, Y. and Cheng X.
2014 Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNA Nature Hashimoto H, Pais JE, Zhang X, Saleh L, Fu ZQ, Dai N, Corrêa IR Jr, Zheng Y, Cheng X
2014 Structure of 5-hydroxymethylcytosine-specific restriction enzyme AbaSI in complex with DNA Nucleic Acids Res Horton JR, Borgaro JG, Griggs RM, Quimby A, Guan S, Zhang X, Wilson GG, Zheng Y, Zhu Z, Cheng X
2014 Structure and mutagenesis of the DNA modification-dependent restriction endonuclease AspBHI Sci Rep Horton JR, Nugent RL, Li A, Mabuchi MY, Fomenkov A, Cohen-Karni D, Griggs RM, Zhang X, Wilson GG, Zheng Y, Xu SY, Cheng X
2000 Structure and function of the mouse DNA methyltransferase Gene, DNMT1 shows a tripartite structure. J.Mol.Biol. Margot, J.B., Aguirre-Arteta, A.M., DiGiacco, B.V., Pradhan, S., Roberts, R.J., Cardoso, M.C.and Leonhardt, H.
2006 Structure and dynamics of the epidermal growth factor receptor C-terminal phosphorylation domain Protein Sci. Lee, N.Y., et al.
2001 Structural study of restriction enzyme MspI/DNA complex by x-ray crystallography Biophys. J. Xu, Q., O'Loughlin, T.J., Kucera, R.B., Schildkraut, I., Guo, H.-C.
1990 Structural studies opf the BamHI restriction enzyme Biophys. J. Strzelecka, T., Dorner, L., Schildkraut, I., Aggarawal, A.
2000 Structural Insights into the Protein Splicing Mechanism of PI-SceI. J.Biol.Chem. Poland, B.W., Xu, M.Q.and Quiocho, F.L.
1999 Structural Insights into the Mechanism of Intramolecular Proteolysis. Cell Xu, M.Q., Buckley, D., Guan, C.and Guo, H-C
2012 Structural insights into the assembly and shape of Type III restriction-modification (R-M) EcoP15I complex by small-angle X-ray scattering J Mol biol. Gupta, Y.K., Yang, L., Chan, S.H., Samuelson, J.C., Xu, S.-Y. and Aggarwal, A.K.
2004 Structural characterization and comparative phylogenetic analysis of E.coli HemK, a protein (N5)-glutamine methyltransferase. Mol.Microbiol. Yang, Z., Shipman, L., Zhang, M., Anton, B., Roberts, R.J.and Cheng, X.
2012 Structural bias in T4 RNA ligase-mediated 3'-adapter ligation Nucleic Acids Res. Zhuang, F., Fuchs, R.T., Sun, Z., Zheng, Y. and Robb, G.B.
2015 Structural basis of asymmetric DNA methylation and ATP-triggered long-range diffusion by EcoP15I Nature Communications Gupta, Y.K., Chan, S.H., Xu, S.Y., and Aggarwal, A.K.
2014 Structural basis for Klf4 recognition of methylated DNA Nucleic Acids Research Yiwei Liu, Yusuf Olatunde Olanrewaju, Yu Zheng, Hideharu Hashimoto, Robert M. Blumenthal, Xing Zhang, Xiaodong Cheng
Structural basis for human PRDM9 action at recombination hot spots. Genes Dev. Patel, A., Horton, J.R., Wilson, G.G., Zhang, X. and Cheng, X.
2016 Structural basis for human PRDM9 action at recombination hot spots Genes Dev Patel, A., Horton, J.R., Wilson, G.G., Zhang, X. and Cheng, X.
2015 Structural and biochemical studies of a moderately thermophilic exonuclease I from Methylocaldum szegediense PLoS One Fei, L., Tian, S., Moysey, R., Misca, M., Barker, J.J., Smith, M.A., McEwan, P.A., Pilka, E.S., Crawley, L., Evans, T. and Sun, D.
2009 Strategies for successful recombinant expression of disulfide bond-dependent proteins in Escherichia coli Microbial Cell Factories de Marco, A.
2014 Strand Invasion Based Amplification (SIBA®): A Novel Isothermal DNA Amplification Technology Demonstrating High Specificity and Sensitivity for a Single Molecule of Target Analyte PLoS One Hoser MJ, Mansukoski HK, Morrical SW, Eboigbodin KE
2010 Stimulated emission depletion nanoscopy of living cells using SNAP-Tag fusion proteins Biophys. J.  Hein B. et al.
2015 Stem cells. Asymmetric apportioning of aged mitochondria between daughter cells is required for stemness Science P, Katajisto., Dohla, J., Chaffer, CL., Pentinmikko, N., Marjanovic, N., Igbal, S., Zoncu, R., Chen, W., Weinberg, RA., Sabatini, DM. SNAP Cell
2008 Stable isotope labeling of protein byKluyveromyces lactis for NMR study J. Biomol NMR. Sugiki, T. Shimada, I. and Takahashi H.
2014 Stable cell surface expression of GPI-anchored proteins, but not intracellular transport, depends on their fatty acid structure Traffic Janesh, N. Correa, I.R., Jr. and Watanabe, R.
2004 SPR-based interaction studies with small molecular weight ligands using hAGT fusion proteins Anal. Biochem. Huber W. et al.
2014 Spontaneous in vitro senescence of glioma cells confirmed by an antibody against IDH1R132H Anticancer Res Stoczynska-Fidelus E, Och W, Rieske P, Bienkowski M, Banaszczyk M, Winiecka-Klimek M, Zieba J, Janik K, Rosiak K, Treda C, Stawski R, Radomiak-Zaluska A, Piaskowski S
2010 Splicing of the Mycobacteriophage Bethlehem DnaB intein: identification of a new mechanistic class of inteins that contain an obligate block F nucleophile. Journal of Biological Chemistry Tori, K., Dassa, B., Johnson, M.A., Southworth, M.W., Brace, L.E., Ishino, Y., Pietrokovski, S., and Perler, F.B.
2014 SpeedyGenes: an improved gene synthesis method for the efficient production of error-corrected, synthetic protein libraries for directed evolution Protein Eng Des Sel Currin A, Swainston N, Day PJ, Kell DB
2008 Spectral resolved gene technology for multiplexed bioluminescence and high content screening Anal. Chem. Michelini, E., Cevenini, L., Mezzanote, L., Ablamsky, D., Southworth, T., Branchini, B. and Roda, A.
2015 Specificity of the ModAll, ModA12 and ModD1 epigenetic regulator N6-adenine DNA methyltransferases of Neisseria Meningitidis Nucleic Acids Res Seib, K.L., Jen, F.E., Tan, A., Scott, A.L., Kumar, R., Power, P.M., Chen, L.T., Wu, H.J., Wang, A.H., Hill, D.M., Luyten, Y.A., Morgan, R.D., Roberts, R.J., Maiden, M.C., Boitano, M., Clark, T.A., Korlach, J., Rao, D.N. and Jennings, M.P.
2005 Specificity changes in the evolution of Type II restriction endonucleases- A Biochemical and bioinformatic analysis of restriction enzymes that recognize unrelated sequences J Biol. Chem. Pingoud, V., Sudina, A., Geyer, H., Bujnicki, J.M., Lurz, R., Luder, G., Morgan, R., Kubareva, E., Pingoud, A.
2004 Specific labeling of cell surface proteins with chemically diverse compounds J .Am. Chem. Soc.  George N. et al.
2004 Specific and covalent targeting of conjugating and deconjugating enzymes of ubiquitin-like proteins Mol. Cell Biol. Hemelaar, J.et al.
1988 Species-specific oligonucleotide probes for the identification of human filarial parasites. Mol.Biochem.Parasitol. Williams, S.A., DeSimone, S.M., and McReynolds, L.A.
2007 Solution Structure of a KlbA Intein Precursor from Methanococcus jannaschii. Protein Sci. Johnson, M., Southworth, M., Herrmann, T., Brace, L., Perler, F.and Wuthrich, K.
2009 Soluble expression and one-step purification of a neurotoxin Huwentoxin-I in Escherichia coli Protein Expr Purif. Che, N., et. al.
2004 Soluble expression and affinity purification of functional domain of human acetylcholine receptor alpha-subunit by the modulation of maltose binding protein. Biotechnol Lett. Li, Z.Y., Li, Y.J., Guo, C.Y., Shi, Y.W., Xu, M-Q., Trommer, W.E.and Yuan, J.M.
2015 SNP-based genetic linkage map of tobacco (Nicotiana tabacum L.) using next-generation RAD sequencing. J Biol Res (Thessalon). Xiao B, Tan Y, Long N, Chen X, Tong Z, Dong Y, Li Y.
2008 SNAP-tag Technologies: Novel tools to study protein function NEB Expressions Johnson K.
2005 SNAP-tag mediated live cell labeling as an alternative to GFP in anaerobic organisms BioTechniques Regoes A. et al.
2006 SmpB triggers GTP hydrolysis of elongation factor Tu on ribosome by compensating for the lack of codon-anticodon interaction during trans-translation initiation J. Biol. Chem. Shimizu, Y. and Ueda, T.
2015 Small RNA-mediated DNA (cytosine-5) methyltransferase 1 inhibition leads to aberrant DNA methylation Nucleic Acids Res Zhang, G., Esteve, P.O., Chin, H.G., Terragni, J., Dai, N., Correa, I.R. Jr. and Pradhan, S.
2009 Site-Specific, covalent labeling of recombinant antibody fragments via fusion to an engineered version of 6-O-alkylguanine DNA alkyltransferase Bioconjug Chem. Kapmeier F. et al.
2011 Site-specific protein labeling by intein-mediated protein ligation. Methods Mol.Biol. Ghosh, I., Considine, N., Maunus, E., Sun, L., Zhang, A., Buswell, J., Evans, T.C.Jr.and Xu, M.Q.
2005 Site-specific immobilization of proteins in a microarray using intein-mediated protein splicing Bioorg. Med. Chem. Lett. Girish, A., et al.
2005 Site-specific DNA-nicking mutants of the heterodimeric restriction endonuclease R.BbvCI. J.Mol.Biol. Heiter, D.F., Lunnen, K.D.and Wilson, G.G.
2009 Site-specific covalent labeling of proteins inside live cells using small molecule probes Bioorg. Med. Chem. Chattopadhaya, S., et al.
2004 Site-specific conjugation of oligonucleotides to the C-terminus of recombinant protein by expressed protein ligation Bioorg. Med. Chem. Lett. Takeda, S.,et al.
1989 Site-directed mutagenesis of the EcoRV methylase for the study of the functional role of the conserved sequences in N6-adenine methylases J. Cell Biochem Barshevsky,T. and Benner J.S.
1998 Site-directed Mutagenesis of Essential Residues Involved in the Mechanism of Bacterial Glycosylasparaginase. J.Biol.Chem. Liu, Y., Guan, C.and Aronson, N.N., Jr.
2009 Site specific conjugation of fluoroprobes to the remodeled Fc N-glycans of monoclonal antibodies using mutant glycosyltransferases: application for cell surface antigen detection Bioconjug. Chem. Boeggeman, E., Ramakrishnan, B., Pasek, M., Manzoni, M., Puri, A., Loomis, K.H., Waybright, T.J., Qasba, P.K. Glycobiology
2013 Single-stranded DNA library preparation for the sequencing of ancient or damaged DNA Nat. Protoc. Gansauge MT, Meyer M.
2008 Single-process expression and purification of multiple recombinant protein through cocultivation and affinity purification. Anal.Biochem. Porte, M.and Chong, S.
2015 Single-molecule visualization of a formin-capping protein 'decision complex' at the actin filament barbed end Nat Commun. Bombardier, J.P., Eskin, J.A., Jaiswal, R., Correa, I.R., Jr., Xu, M.Q., Goode, B.L. and Gelles, J.
1997 Single-column purification of free recombinant proteins using a self-cleavable affinity tag derived from a protein splicing element. Gene Chong, S., Mersha, F.B., Comb, D.G., Scott, M.E., Landry, D., Vence, L.M., Perler, F.B., Benner, J., Kucera, R.B., Hirvonen, C.A., Pelletier, J.J., Paulus, H., and Xu, M.Q.
2005 Single-cell FRET imaging of transferrin receptor trafficking dynamics by Sfp-catalyzed, site-specific protein labeling Chem. Biol Yin J. et al.
2016 Single-cell 5hmC sequencing reveals chromosome-wide cell-to-cell variability and enables lineage reconstruction Nature Biotechnology Mooijman D, Dey S S, Boisset JC, Crosetto N, van Oudenaarden A Epigenetics
2008 Single molecule imaging of full protein synthesis by immobilized ribosomes Nuc. Acid. Res.  Uemura, S., Iizuka, R., Ueno, T., Shimizu, Y., Taguchi, H., Ueda, T., Puglisi. J., and Funatsu, T.
2007 Single M13 bacteriophage tethering and stretching. Proc.Natl.Acad.Sci.USA Khalil, A.S., Ferrer, J.M., Brau, r.R., Kottmann, S.T., Noren, C.J., Lang, M.J.and Belcher, A.M.
2008 Simultaneous protein tagging in two colors Chemistry & Biology Schulz C. and Köhn M.
2012 Simultaneous multiple target detection in real-time loop-mediated isothermal amplification Biotechniques Tanner, N.A., Zhang, Y. and Evans, T.C. Jr.
2012 Simultaneous multiple target detection in real-time loop-mediated isothermal amplification Biotechniques Tanner NA, Zhang Y, Evans TC Jr.
2015 Simultaneous generation of many RNA-seq libraries in a single reaction Nat Methods Shishkin AA, Giannoukos G, Kucukural A, Ciulla D, Busby M, Surka C, Chen J, Bhattacharyya RP, Rudy RF, Patel MM, Novod N, Hung DT, Gnirke A, Garber M, Guttman M, Livny J
2006 Simultaneous amplification and screening of whole plasmids using the T7 bacteriophage replisome. Nucl.Acids.Res. Xu, Y., Kim, H-J., Kays, A., Rice, J.and Kong, H.
2016 Simple Isothermal Strategy for Multiplexed, Rapid, Sensitive, and Accurate miRNA Detection ACS Sens Wee E J H, Trau M,
2016 Simple and Highly Sensitive Molecular Diagnosis of Zika Virus by Lateral Flow Assays. Anal Chem. Lee D, Shin Y, Chung S, Hwang KS, Yoon DS, Lee JH
2011 Simple and efficient synthesis of 5′ pre-adenylated DNA using thermostable RNA ligase. Nucl.Acids Res. Zhelkovsky, A.M.and McReynolds, L.A.
2008 Significance of the KLAC1 gene in glucosylceramide production by Kluyveromyces lactis FEMS Yeast Res Takakuwa, N., Oshnishi, M., and Oda, Y.
2008 Sialylation of beta1 integrins blocks cell adhesion to galectin-3 and protects cells against galectin-3-induced apoptosis J. Biol. Chem. Zhuo, Y., Chammas, R., Bellis, S.L.
2007 Sialic acid on herpes simplex virus type 1 envelope glycoproteins is required for efficient infection of cells  J. Virol. Teuton, J.R., Brandt, C.R.
2012 SHuffle, a novel Escherichia coli protein expression strain capable of correctly folding disulfide bonded proteins in its cytoplasm Lobstein, J., Emrich, C.A., Jeans, C., Faulkner, M., Riggs, P. and Berkmen, M.
2012 SHuffle, a novel Escherichia coli protein expression strain capable of correctly folding disulfide bonded proteins in its cytoplasm Microbial Cell Factories Lobstein, J., Emrich, C.A., Jeans, C., et al.
2008 Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning. Nature Cokus, S.J., Feng, S., Zhang, X., Chen, Z., Merriman, B., Haudenschild, C.D., Pradhan, S., Nelson, S.F., Pellegrini, M.and Jacobsen, S.E.
2007 Shining a light on protein expression in living organisms. Nat Chem Biol Perler, F.
2009 SET7/9 mediated methylation of non-histone proteins in mammalian cells. Epigenetics Pradhan, S., Chin, H.G., Esteve, P.O.and Jacobsen, S.E.
2015 Serum N-Glycans: A New Diagnostic Biomarker for Light Chain Multiple Myeloma Sci Rep Chen J., Fang M., Zhao YP., Yi CH., Ji J., Cheng C., Wang MM., Gu X., Sun QS., Chen XL., Gao CF.
2017 Serotyping dengue virus with isothermal amplification and a portable sequencer Scientific Reports Yamagishi, J., et al.
2014 Serine and proline-rich ligands enriched via phage-display technology show preferential binding to BCR/ABL expressing cells Hematol Oncol Stem Cell Ther Shires K, Shankland I, Mowla S, Njikan S, Jaymacker J, Novitzky N Phage Display
2016 Sequential formation of two branched intermediates during protein splicing of class three inteins Extremophiles Tori, K. and Perler, F.
2017 Sequential formation of two branched intermediates during protein splicing of class three inteins Extrmophiles Tori, K. and Perler, F.
2014 Sequencing of captive target transcripts identifies the network of regulated genes and functions of primate-specific miR-522 Cell Rep Tan SM, Kirchner R, Jin J, Hofmann O, McReynolds L, Hide W, Lieberman J
1986 Sequencing in the Fast Lane: A Rapid Protocol for [a-35S] dATP Dideoxy DNA Sequencing. BioTechniques Williams, S.A., Slatko, B.E., Moran, L.S., and DeSimone, S.M.
2002 Sequencing and analysis of a 63 kb bacterial artificial chromosome insert from the Wolbachia endosymbiont of the human filarial parasite Brugia malayi. Int.J.Parasitol. Ware, J., Moran, L., Foster, J., Posfai, J., Vincze, T., Guiliano, D., Blaxter, M., Eisen, J.and Slatko, B.
2015 Sequence-tagged high-density genetic maps of Zoysia japonica provide insights into genome evolution in Chloridoideae. Plant J. Wang F, Singh R, Genovesi AD, Wai CM, Huang X, Chandra A, Yu Q.
2015 Sequence-specific DNA nicking endonucleases Biomol concepts Xu, S-Y
2010 Sequence-specific cleavage of RNA by Type II restriction enzymes. Nucl.Acids.Res. Murray, I.A., Stickel, S.K.and Roberts, R.J.
2009 Sequence-independent and reversible photocontrol of transcription/expression systems using a photosensitive nucleic acid binder Proc. Natl. Acad. Sci.  Estevez-Torres, A., Crozatier, C., Diguet, A., Hara, T., Saito, H., Yoshikawa, K., and Baigl, D.
2005 Sequence Specificity and Role of Proximal Amino Acids of the Histone H3 Tail on Catalysis of Murine G9a Lysine 9 Histone H3 Methyltransferase. Biochemistry Chin, H.G., Pradhan, M., Esteve, P., Patnaik, D., Evans, T.C.Jr.and Pradhan, S.
1998 Sequence Comparison of the EcoHK31I and EaeI Restriction-Modification Systems Suggests an Intergenic Transfer of Genetic Material. Biol.Chem. Lee, K-F, Shaw, P-C, Picone, S.J., Wilson, G.G.and Lunnen, K.D.
2008 Septin stability and recycling during dynamic structural transitions in cell division and development Current Biology McMurray, M.A. and Thorner, J.
2009 Sensitive in vivo imaging of T cells using membrane-bound gaussia princeps luciferase Nat. Med. Santos, E., Yes, R., Lee, J., et al
2009 Sensitive in vivo imaging of T cells using membrane-bound gaussia princeps luciferase Nat. Med. Santos, E., Yeh, R., Lee, J., et al.
2016 Sensitive Detection of Plasmodium vivax Using a High-Throughput, Colourimetric Loop Mediated Isothermal Amplification (HtLAMP) Platform: A Potential Novel Tool for Malaria Elimination. PLoS Negl Trop Dis Britton, S., Cheng, Q., Grigg, M.J., Poole, C.B., Pasay, C., William, T., Fornace, K., Anstey, N.M., Sutherland, C.J., Drakeley, C. and McCarthy, J.S.
2012 Sensitive detection of chromatin coassociations using enhanced chromosome conformation capture on chip Nat Protoc Sexton T, Kurukuti S, Mitchell JA, Umlauf D, Nagano T, Fraser P Epigenetics,DNA Methylation Analysis,Restriction Enzymes for Epigenetics
2016 Sensitive and specific miRNA detection method using SplintR LigasePublication. Nucleic Acids Res. Jin, J., Vaud, S., Zhelkovsky, A.M., Posfai, J. and McReynolds, L.A.
2009 Semisynthetic fluorescent sensor proteins based on self-labeling protein tags J. Am. Chem. Soc. Brun M.A. et al.
1998 Semisynthesis of cytotoxic proteins using a modified protein splicing element. Protein Sci. Evans, T.C., Benner, J.and Xu, M-Q
2004 Semisynthesis of a segmental isotopically labeled protein splicing precursor: NMR evidence for an unusual peptide bond at the N-extein-intein junction Proc. Natl. Acad. Sci. USA Romanelli, A., et al.
2006 Semisynthesis and characterization of mammalian thioredoxin reductase Biochem. Eckenroth, B., et al.
2003 Semisynthesis and application of carboxyfluorescein-labelled biologically active human interleukin-8 Biol. Chem. David, R., et al.
2002 Self-generated DNA termini relax the specificity of SgrAI restriction endonuclease. Proc.Natl.Acad.Sci.USA Bitinaite, J.and Schildkraut, I.
2005 Self-cleavable stimulus responsive tags for protein purification without chromatography J. Am. Chem. Soc Ge, X., et. al.
2006 Self-assembling protein arrays on DNA chips by auto-labeling fusion proteins with a single DNA address  Proteomics Jongsma M.A., Litjens R. H.
2008 Selective labeling of proteins with chemical probes in living cells Physiology Lin M.Z. and Wang L.
2015 Selective expression of sense and antisense transcripts of the sushi-ichi-related retrotransposon - derived family during mouse placentogenesis. Retrovirology Christine Henke, Pamela L Strissel, Maria-Theresa Schubert, Megan Mitchell, Claus C Stolt, Florian Faschingbauer, Matthias W Beckmann, Reiner Strick High-Fidelity PCR
2009 Selective cross-linking of interacting proteins using self-labeling tags J. Am. Chem. Soc.  Gautier A. et al.
2007 Selection of restriction endonucleases using artificial cells. Nucl.Acids.Res. Zheng, Y.and Roberts, R.
2011 Selection of peptides targeting helix 31 of bacterial 16S ribosomal RNA by screening M13 phage-display libraries Molecules Lamichhane, T.N., Abeydeera, N.D., Duc, A.C., Cunningham, P.R. and Chow, C.S
2013 Selection of a Mimotope Peptide of S-adenosyl-l-homocysteine and Its Application in Immunoassays Molecules Wu C. and Tzertzinis G. 
Selection of a mimotope peptide of S-adenosyl-l-homocysteine and its application in immunoassays Molecules Wu, C. and Tzertzinis, G. Phage Display
2002 Selection for mutants improving expression of an anti-MAP kinase monoclonal antibody by filamentous phage display. J.Immunol.Methods Tuckey, C.D.and Noren, C.J.
2006 Selection and properties for the recognition of P19 embryonic carcinoma stem cells Biotechnol. Prog. Morita, Y. et al.
2007 Selecting targeting of adenoviral vectors to neural precursor cells in the hippocampus of adult mice: new prospects for in situ gene therapy Stem Cells Schmidt, A. et al.
2013 Segregation of Family A G Protein Coupled Receptor Protomers in the Plasma Membrane Molecular Pharmacology Anthony Gavalas, Tien-Hung Lan, Qiuju Liu, Ivan R. Corrêa, Jr., Jonathan A. Javitch, and Nevin A. Lambert
2004 Segmentally Variable Genes: A new perspective on adaptation. PLoS Biology Zheng, Y., Roberts, R.J., and Kasif, S.
2010 Secretory production of recombinant proteins in Escherichia coli Recent Patents on Biotechnology Yoon, S.H., Kim, S.K., and Kim J.F.
2011 Screening of specific binding peptide targeting blood vessel of human esophageal cancer in vivo in mice Chin. Med. J. Zhi, M. et al.
Screening of genetic parameters for soluble protein expression in Escherichia coli Protein Expression and Purification Vernet, E., Kotzsch, A., Voldborg, B., et al.
1984 Screening for and characterizing restriction endonucleases Genetic Engineering Schildkraut, I.
2014 Science for the suffering Scientific American World View Slatko, B.
2005 Sau421, a Bcgl-like restriction-modification system encoded by the Staphylococcus aureus quadruple-converting phage phi 42 Microbiology Dempsey, R.M., Carroll, D., Kong, H.M., Higgins, L., Keane, C.T., Coleman, D.C.
2005 Saccharomyces cerevisiae Ybr004c and its human homologue are required for addition of the second mannose during glycosylphosphatidylinositol precursor assembly. FEBS Journal Fabre, A-L, Orlean, P.and Taron, C.H.
2017 Rpn (YhgA-Like) Proteins of Escherichia coli K-12 and their Contribution to Rec-A-Independent Horizontal Transfer J. Bacteriol Kingston, A.W., Ponkratz, C. and Raleigh, E.A.
2014 Role of lipid rafts and GM1 in the segregation and processing of prion protein PLoS One Botto L, Cunati D, Coco S, Sesana S, Bulbarelli A, Biasini E, Colombo L, Negro A, Chiesa R, Masserini M, Palestini P Glycobiology
2013 ROLE OF HUMAN HYPOXANTHINE GUANINE PHOSPHORIBOSYLTRANSFERASE IN ACTIVATION OF THE ANTIVIRAL AGENT T-705 (FAVIPIRAVIR) Molecular Pharmacology Fast Forward Lieve Naesens, Luke Guddat, Dianne Keough, André B.P. van Kuilenburg, Judith Meijer, Johan Vande Voorde and Jan Balzarini
2013 Role of DNA methylation in expression and transmission of porcine endogenous retroviruses. PLOS ONE Matousková, M., Vesely, P., Daniel, P., Mattiuzzo, G., Hector, R.D., Scobie, L., Takeuchi, Y. and Hejnar, J.
2013 RNAi triggered by specialized machinery silences developmental genes and retrotransposons Nature Yamanaka, S., Mehta, S., Reyes-Turcu, F.E., Zhuang, F., Fuchs, R.T., Rong, Y., Robb, G.B. and Grewal, S.I.
2012 RNAi triggered by specialized machinery silences developmental genes and retrotransposons Nature Yamanaka, S., Mehta, S., Reyes-Turcu, F.E., Zhuang, F., Fuchs, R.T., Rong, Y., Robb, G.B. and Grewal, S.I.
2014 RNA-RNA Interactions Enable Specific Targeting of Noncoding RNAs to Nascent Pre-mRNAs and Chromatin Sites Cell Jesse M. Engreitz, Klara Sirokman, Patrick McDonel, Alexander A. Shishkin, Christine Surka, Pamela Russell, Sharon R. Grossman, Amy Y. Chow, Mitchell Guttman, and Eric S. Lander
2013 RNA-Methylation-Dependent RNA Processing Controls the Speed of the Circadian Clock Cell Fustin, J.-M. et al.
2008 RNA-Dependent DNA Polymerases. Curr.Protoc.Mol.Biol. Tzertzinis, G., Tabor, S., and Nichols, N.M.
2008 RNA Polymerases. Curr.Protoc.Mol.Biol. Paschal, B.M., McReynolds, L.A., Noren, C.J.and Nichols, N.M.
2008 RNA ligases. Curr.Protoc.Mol.Biol. Nichols, N.M., Tabor, S.and McReynolds, L.A.
2008 RimO, a MiaB-like enzyme, methylthiolates the universally conserved Asp88 residue of ribosomal protein S12 in Escherichia coli. Proc Natl Acad Sci. Anton, B.P., Saleh, L., Benner, J.S., Raleigh, E.A., Kasif, S.and Roberts, R.J.
2013 Ribosome profiling provides evidence that large noncoding RNAs do not encode proteins Cell Guttman M, Russell P, Ingolia NT, Weissman JS, Lander ES
2010 Ribosome display with the PURE technology Methods Mol Biol. Ueda, T., Kanamori, T., Ohashi, H.
2008 Ribosomal Synthesis of Peptidase-Resistant Peptides Closed by a Nonreducible Inter-Side-Chain Bond ACS Chem. Biol.  Sako, Y., Goto, Y., Murakami, H., and Suga, H.
2008 Ribosomal Synthesis of N-Methyl Peptides  J. Am. Chem. Soc. Subtelny. A. O.,Hartman, M. C. T., and Szostak, J. W.
2008 Ribonucleases. Curr.Protoc.Mol.Biol. Nichols, N.M., and Yue, D.
2010 Revolutionizing membrane protein overexpression in bacteria  Micro. Biotech. Schlegel, S., Klepsch, M., Gialama, D., Wickström, D., Slotboom, D.J. and de Gier, J.
2003 Revised Escherichia coli selenocysteine insertion requirements determined by in vivo screening of combinatorial libraries of SECIS variants. Nucl.Acids Res. Sandman, K.E., Tardiff, D.F., Neely, L.A.and Noren, C.J.
2012 Review: Small RNA expression profiling by high-throughput sequencing: Implications of enzymatic manipulation Journal of Nucleic Acids Zhuang, F., Fuchs, R.T. and Robb, G.B.
2017 Restriction-modification mediated barriers to exogenous DNA uptake and incorporation employed by Prevotella intermedia Johnston, C.D., Skeete, C.A., Fomenkov, A., Roberts, R.J., Rittling, S.R.
2015 Restriction Site-Associated DNA Sequencing (RAD-seq) Reveals an Extraordinary Number of Transitions among Gecko Sex-Determining Systems. Mol Biol Evol. Gamble T, Coryell J, Ezaz T, Lynch J, Scantlebury DP, Zarkower D.
1998 Restriction Modification Systems: Where They Are and What They Do. Bacterial Genomes Raleigh, E.A.and Brooks, J.E
2012 Restriction Enzymes in Microbiology, Biotechnology and Biochemistry Encuentro Geoffrey G. Wilson, Hua Wang, Daniel F. Heiter, Keith D. Lunnen
2012 Restriction enzymes in Microbiology Biotechnology and Biochemistry Proceedings of the 2012 Nicaraguan Biotechnology Conference Wilson, G.G., Wang, H., Heiter, D.F., and Lunnen, K.D.
1993 Restriction enzymes from Campylobacter coli strains. Acta gastroenterol.belg. Vitor, J.M.B., Polisson, C., Cabrita, J., and Silva, R.V.C.
2001 Restriction enzyme BsoBI-DNA complex: a tunnel for recognition of degenerate DNA sequences and potential histidine catalysis. Structure van der Woerd, M.J., Pelletier, J.J., Xu, S.and Friedman, A.M.
2001 Restriction endonucleases. In: Molecular biology problem solver Wiley-Liss, Inc. Robinson, D., Walsh, P.R., Bonventre, J.A.
1980 Restriction endonucleases from three strains of Haemophilus influenzae Sci. Sin. Shen, S.X., Li, Q.L., Yan, P,F., Zhou, B., Ye, S.Y., Lu, Y.Y., Wang, D.B.
1987 Restriction endonucleases for pulsed field mapping of bacterial genomes. Nucl.Acids Res. McClelland, M., Jones, R., Patel, Y., and Nelson, M.
2013 Restriction endonuclease TseI cleaves A:A and T:T mismatches in CAG and CTG repeats Nucleic Acids Res Ma L, Chen K, Clarke DJ, Nortcliffe CP, Wilson GG, Edwardson JM, Morton AJ, Jones AC, Dryden DT
2017 Restriction endonuclease AgeI is a monomer which dimerizes to cleave DNA Nucleic Acids Res. Tamulaitiene, G., Jovaisaite, V., Tamulaitis, G., Songailiene, I., Manakova, E., Zaremba, M., Grazulis, S., Xu, S.Y., Siksnys, V.
2015 Restriction Cascade Exponential Amplification (RCEA) assay with an attomolar detection limit: a novel, highly specific, isothermal alternative to qPCR Scientific Reports
1994 Restriction and modification. In: Molecular Biology of Bacteriophage T4 American Society for Microbiology, Washington, D.C. Carlson, K., Raleigh, E.A. and Hattman, S.
1991 Restriction and Modification Systems. Ann.Rev.Genet. Wilson, G.G., and Murray, N.E.
1987 Restriction and modification in vivo by Escherichia coli K12 Methods Enzymol. Raleigh, E.A.
2008 Restriction and modification enzymes and their recognition sequences. Life Illuminated Roberts, R.J.
2010 Restrained expression, a method to overproduce toxic membrane proteins by exploiting operator–repressor interactions Pro. Sci. Narayanan, A., Ridilla, M. and Yernool, D.A.
1994 Response to UV Damage by Four Escherichia coli K-12 Restriction Systems. J.Bacteriol. Kelleher, J.E., and Raleigh, E.A.
2004 Rescue of protein splicing activity from a Magnetospirillum magnetotacticum intein-like element. Biochem.Soc.Trans. Southworth, M.W., Yin, J.and Perler, F.B.
2015 Rescue of cells from apoptosis increases DNA repair in UVB exposed cells: implications for the DNA damage response Toxicol. Res. Karbaschi, Mahsa., Macip, Salvador., Mistry, Vilas., Abbas, Hussein H.K., Delinassios, George J., Evans, Mark D., Young, Antony R., Cooke, Marcus S.
2010 Repositioning of an existing drug for the neglected tropical disease Onchocerciasis. Proc.Natl.Acad.Sci.USA Gloeckner, C., Garner, A.L., Mersha, F., Oksov, Y., Tricoche, N., Eubanks, L.M., Lustigman, S., Kaufmann, G.F.and Janda, K.D.
2017 Removing the needle from the haystack: Enrichment of Wolbachia endosymbiont transcripts from host rematode RNA by Cappable-seqTM PLoS One Luck, A.N., Slatko, B.E., Foster, J.M.
2016 Reminder to deposit DNA sequences Science Blaxter, M., Danchin, A., Savakis, B., Fukami-Kobayashi, K., Kurokawa, K., Sugano, S., Roberts, R.J., Salzberg, S.L. and Wu, C.I.
2008 Reliability of Cycloplegic Autorefractor Measurements to determine Spherical and Astigmatic Refractive Errors in Young Children Journal of Ophthalmology and Visual Science Pedamallu, S.B., Reddy, K.S., Pedamallu, R.and Pedamallu, C.S.
1998 Regulation of the p70 S6 Kinase by Phosphorylation in Vivo. J.Biol.Chem. Weng, Q.-P., Kozlowski, M., Belham, C., Zhang, A., Comb, M.J., Avruch, J.
1992 Regulation of the BamHI restriction-modification system by a small intergenic open reading frame, bamHIC, in both Escherichia coli and Bacillus subtilis. J.Bacteriol. Ives, C.L., Nathan, P.D., and Brooks, J.E.
1995 Regulation of sCD4-183 gene expression from phage-T7-based vectors in Escherichia coli. Gene Kelley, K.C., Huestis, K.J., Austen, D.A., Sanderson, C.T., Donoghue, M.A., Stickel, S.., Kawasaki, E.S., and Osburne, M.S.
2011 Regulation of expression and activity of DNA (cytosine-5) methyltransferases in mammalian cells Prog Mol Biol Transl Sci. Kinney, S.R. and Pradhan, S.
2009 Regulation of endosomal clathrin and retromer-mediated endosome to Golgi retrograde transport by the J-domain protein RME-8. EMBO J. Shi, A., Sun, L., Banerjee, R., Tobin, M.Zhang, Y.and Grant, B.D.
2009 Regulation of DNMT1 Stability through SET7-Mediated Lysine Methylation in Mammalian Cells. Proc.Natl.Acad.Sci. Esteve, P.O., Chin, H.G., Benner, J., Feehery, G.R., Samaranayake, M., Horwitz, G.A., Jacobsen, S.E.and Pradhan, S.
1999 Regulation of 4E-BP1 phosphorylation: a novel two-step mechanism. Genes & Devel. Gingras, A-C., Gygi, S.P., Raught, B., Polakiewicz, R.D., Abraham, R.T., Hoekstra, M.F., Aebersold, R.and Sonenberg, N.
2010 Reduced evolvability of Escherichia coli MDS42, an IS-less cellular chassis for molecular and synthetic biology applications. Microbial Cell Factories Umenhoffer, K., Feher, T., Baliko, G., Ayaydin, F.Posfai, J., Blattner, F.R.and Posfai, G.
2016 Redox pathway sensing bile salts activates virulence gene expression in Vibrio cholerae. Mol Microbiol. Xue, Y., Tue, F., Shi, M., Wu, C.Q., Ren, G., Wang, X., Fang, W., Song, H. and Yang, M.
2012 Reconstitution of translation from Thermus thermophilus reveals a minimal set of components sufficient for protein synthesis at high temperatures and functional conservation of modern and ancient translation components Nucleic Acids Res. Zhou, Y., Asahara, H. and Chong, S.
2016 Reconstitution of Protein Translation of Mycobacterium Reveals Functional Conservation and Divergence with the Gram-Negative Bacterium Escherichia coli. PLoS One. Srivastava, A., Asahara, H., Zhang, M., Zhang, W., Liu, H., Cui, S., Jin, Q. and Chong, S.
2011 Recombination in Wolbachia endosymbionts of filarial nematodies? Appl.Environ.Microbiol. Foster, J., Slatko, B., Bandi, C.and Kumar, S.
2002 Recombinant Gaussia luciferase. Overexpression, purification, and analytical application of a bioluminescent reporter for DNA hybridization Anal Chem. Verhaegen, M. and Christopoulos, T.K.
2001 Recombinant human DNA (cytosine-5) methyltransferase.III.Allosteric control, reaction order, and influence of plasmid topology and triplet repeat length on methylation of the fragile X CGGCCG sequence. J.Biol.Chem. Bacolla, A., Pradhan, S., Larson, J.E., Roberts, R.J.and Wells, R.D.
1999 Recombinant Human DNA (Cytosine-5) Methyltransferase.I.expression, purification, and comparison of de novo and maintenance. J.Biol.Chem. Pradhan, S., Bacolla, A., Wells, R.D.and Roberts, R.J.
2002 Recombinant Gaussia luciferase. Overexpression, purification and analytical application of a bioluminescent reporter for DNA hybridization Anal Chem Verhaegen, M., Christopoulos, T.K.
2004 Recognition of DNA substrates by T4 polynucleotide kinase. Nucl.Acids Res. Eastberg, J., Pelletier, J.and Stoddard, B.
2015 Recognition and cleavage of 5-methylcytosine DNA by bacterial SRA-HNH proteins Nucleic Acids Res. Han, T., Yamada-Mabuchi, M., Zhao, G., Li, L., Liu, G., Oui, H-Y, Deng, Z., Zheng, Y. and He, X.
2006 RecJ exonuclease: substrates, products and interaction with SSB. NAR Han, E.S., Cooper, D.L., Persky, N.S., Sutera, V.A.Jr., Whitaker, R.D., Montello, M.L.and Lovett, S.T.
2011 Recent developments in difficult protein expression: A guide to E. colistrains, promoters, and relevant host mutations. Methods in Molecular Biology Samuelson, J.C.
1993 Recent Advances in the Application of Molecular Biology in Filariasis. Proceeding of the 34th SEAMEO TROPMED Regional Seminar: Southeast Asian Journal of Tropical Medicine and Public Health McReynolds, L.A., Poole, C., Hong, Y., Williams, S.A., Partono, F., and Bradley, J.
2005 Recent Advances in Protein Splicing: Manipulating Proteins In Vitro and In Vivo. Curr.Opin.Biotech. Xu, M.Q.and Evans, T.C.Jr.
2001 REBASE-restriction enzymes and methylases. Nucl.Acids Res. Roberts, R.J., and Macelis, D.
2000 REBASE-restriction enzymes and methylases. Nucl.Acids Res. Roberts, R.J.and Macelis, D.
1998 REBASE-restriction enzymes and methylases. Nucl.Acids Res. Roberts, R.J.and Macelis, D.
1999 REBASE-restriction enzymes and methylases. Nucl.Acids Res. Roberts, R.J.and Macelis, D.
1993 REBASE-restriction enzymes and methylases. Nucl.Acids Res. Roberts, R.J.and Macelis, D.
1997 REBASE-restriction enzymes and methylases. Nucl.Acids Res. Roberts, R.J.and Macelis, D.
1996 REBASE--restriction enzymes and methylases. Nucl.Acids Res. Roberts, R.J.and Macelis, D.
2007 Rebase--enzymes and genes for DNA restriction and modification Nucleic Acids Res Roberts, R.J., Vincze, T., Posfai, J., Macelis, D.
2010 REBASE – a database for DNA restriction and modification: enzymes, genes and genomes. Nucl.Acids.Res. Roberts, R.J., Vincze, T., Posfai, J., Macelis, D.
2003 REBASE Restriction enzymes and methyltransferases. Nucl.Acids Res. Roberts, R.J., Vincze, T., Posfai, J.and Macelis, D.
1994 REBASE - restriction enzymes and methylases Nucl.Acids.Res. Roberts, R.J.and Macelis, D.
2005 REBASE - restriction enzymes and DNA methyltransferases. Nucl.Acids.Res. Roberts, R.J., Vincze, T., Posfai, J.and Macelis, D.
2015 REBASE - A database for DNA restriction and modification: enzymes, genes and genomes Nucleic Acids Res Roberts, R.J., Vincze, T., Posfai, J., Macelis, D.
2014 REBASE - A database for DNA restriction and modification: enzymes, genes and genomes Nucleic Acids Research, Advance Access Roberts, R.J., Vincze, T., Posfai, J., Macelis, D.
2015 Real-Time Sequence-Validated Loop-Mediated Isothermal Amplification Assays for Detection of Middle East Respiratory Syndrome Coronavirus (MERS-CoV). PLoS One Sanchita Bhadra, Yu Sherry Jiang, Mia R Kumar, Reed F Johnson, Lisa E Hensley, Andrew D Ellington Isothermal Amplification
2006 Real-time observation of trigger factor function on translating ribosomes Nature Kaiser, C.M., Chang, H.C., Agashe, V.R., Lakshmipathy, S.K., Etchells, S.A., Hayer-Hartl, M., Hartl, F.U. and Barral, J.M.
2006 Reactivity of intein thioesters: appending a functional group to a protein Chembiochem. Kalia, J., et al.
2007 Rational manipulation of carrier-domain geometry in nonribosomal peptide synthetases ChemBioChem. Liu E and Bruner S. D.
2009 Rational Engineering of Type II Restriction Endonuclease DNA Binding and Cleavage Specificity. Nucl.Acids.Res. Morgan, R.D.and Luyten, Y.A.
2009 Rational Design of a Fusion Partner for Membrane Protein Expression in E.coli. Protein Sci. Luo, J., Choulet, J.and Samuelson, J.C.
2007 Rational design of a chimeric endonuclease targeted to NotI recognition site. Protein Eng Des Sel Zhang, P., Bao, Y., Higgins, L.and Xu, S-Y.
2015 Rational design of 'controller cells' to manipulate protein and phenotype expression. Metab Eng Amin Zargar, David N Quan, Milad Emamian, Chen Yu Tsao, Hsuan-Chen Wu, Chelsea R Virgile, William E Bentley High-Fidelity PCR
2013 Rapid, modular and reliable construction of complex mammalian gene circuits Nucleic Acids Res Guye P, Li Y, Wroblewska L, Duportet X, Weiss R Gibson Assembly®
2016 Rapid, Low-Cost Detection of Zika Virus Using Programmable Biomolecular Components Cell Pardee P, Green A A, Takahashi M K, Braff D, Lambert G, Lee J W, Ferrante T, Ma D, Donghia N, Fan M, Daringer N M, Bosch I, Dudley D M, O’Connor D H, Gehrke H, Collins J J
2017 Rapid Time Scale Analysis of T4 DNA Ligase–DNA Binding. Biochemistry Bauer, R.J., Jurkiw, T.J., Evans, T.C. Jr. and Lohman, G.J.
2015 Rapid Preparation of Released N-Glycans for HILIC Analysis Using a Labeling Reagent that Facilitates Sensitive Fluorescence and ESI-MS Detection Anal Chem Lauber, M.A., Yu, Y.Q., Brousmiche,D.W., Hua, Z., Koza, S.M., Magnelli, P., Guthrie, E., Taron, C.H. and Fountain, K.J.
2010 Rapid optical imaging of EGF receptor expression with a single-chain antibody SNAP-tag fusion protein Eur. J. Med. Mol. Imaging Kampmeier, F. et al.
Rapid Low-Cost Detection of Zika Virus Using Programmable Biomolecular Components
2015 Rapid isolation and single-molecule analysis of ribonucleoproteins from cell lysate by SNAP-SiMPull RNA Margaret L Rodgers, Joshua Paulson, Aaron A Hoskins SNAP Cell,SNAP Surface
2012 Rapid incorporation kinetics and improved fidelity of a novel class of 3'-OH unblocked reversible terminators Nucleic Acids Res. Gardner, A.F., Wang, J., Wu, W., Karouby, J., Li, H., Stupi, B.P., Jack, W.E., Hersh, M.N. and Metzker, M.L.
2010 Rapid electronic detection of probe-specific microRNAs using thin nanopore sensors Nature Nanotech Wanunu, M., et al.
2015 Rapid detection of equine coronavirus by reverse transcription loop-mediated isothermal amplification. J Virol Methods Manabu Nemoto, Yoshinori Morita, Hidekazu Niwa, Hiroshi Bannai, Koji Tsujimura, Takashi Yamanaka, Takashi Kondo Isothermal Amplification
2014 Rapid and Efficient Assembly of Transcription Activator-Like Effector Genes by USER Cloning J Genet Genomics Wang S, Li W, Wang S, Hu B USER™ Cloning
2010 Radiation-guided drug delivery to mouse models of lung cancer Clin. Cancer Res. Hairiri, G. et al.
2016 RAD-seq derived genome-wide nuclear markers resolve the phylogeny of tunas. Mol Phylogenet Evol. Díaz-Arce N, Arrizabalaga H, Murua H, Irigoien X, Rodríguez-Ezpeleta N.
2016 RAD-seq data point to a northern origin of the arctic-alpine genus Cassiope (Ericaceae). Mol Phylogenet Evol. Hou Y, Nowak MD, Mirré V, Bjorå CS, Brochmann C, Popp M.
2015 RAD sequencing and genomic simulations resolve hybrid origins within North American Canis. Bio Lett. Rutledge LY, Devillard S, Boone JQ, Hohenlohe PA, White BN.
2016 RAD mapping reveals an evolving, polymorphic and fuzzy boundary of a plant pseudoautosomal region. Mol Ecol. Qiu S, Bergero R, Guirao-Rico S, Campos JL, Cezard T, Gharbi K, Charlesworth D.
2016 RAD mapping reveals an evolving polymorphic and fuzzy boundary of a plant pseudoautosomal region Mol Ecol. Qiu S, Bergero R, Guirao-Rico S, Campos JL, Cezard T, Gharbi K, Charlesworth D.
2016 Quantitative profiling of glycans and glycopeptides: an informatics' perspective Curr Opin Struct Biol. Walsh, I., Zhao, S., Campbell, M., Taron, C.H. and Rudd, P.M.
2013 Quantifying Elongation Rhythm during Full-Length Protein Synthesis Rosenblum G, Chen C, Kaur J, Cui X, Zhang H, Asahara H, Chong S, Smilansky Z, Goldman YE, Cooperman BS.
2001 Qualitative detection of apoptotic cells assessed by DNA fragmentation. Methods Mol.Biol. McIlwrath, A.J.
2010 Purification of untagged HIV-1 reverse transcriptase by affinity chromatography Protein Expr. Purif. Lu, M., et. al.
2000 Purification of the Novel Endonuclease, Hpy188I, and Cloning of Its Restriction-Modification Genes Reveal Evidence of Its Horizontal Transfer to the Helicobacter pylori Genome. J.Biol.Chem. Xu, Q., Stickel, S., Roberts, R.J., Blaser, M.J.and Morgan, R.D.
2003 Purification of recombinant proteins from E.coli by engineered inteins. Methods Mol.Biol. Xu, M.-Q.and Evans, T.C., Jr.
2001 Purification of proteins fused to either the amino or carboxy terminus of the Mycobacterium xenopi gyrase A intein. BioTechniques Southworth, M.W., Amaya, K., Evans, T.C., Xu, M-Q and Perler, F.B.
1999 Purification of Proteins Fused to Either the Amino or Carboxy Terminus of the Mycobacterium xenopi Gyrase A Intein. Cloning and Expression vectors for Gene Function Analysis Southworth, M.W., Amaya, K., Evans, T.C., Xu, M.Q.and Perler, F.B.
1985 Purification of MboII methylase (GAAGmA) from Moraxella bovis: site specific cleavage of DNA at nine and ten base pair sequences. Nucl.Acids Res. McClelland, M., Nelson, M., and Cantor, C.R.
2008 Purification of green fluorescent protein using a two-intein system Appl. Microbiol. Biotechnol. Zhao, Z., et. al.
2002 Purification and initial crystallization studies of a DnaB intein from Synechocystis sp.PCC 6803. Acta Crystallogr.D.Biol.Crystallogr. Chen, X., Xu, M.-Q., Ding, Y., Ferrandon, S.and Rao, Z.
1999 Purification and crystallization of precursors and autoprocessed enzymes of Flavobacterium glycosylasparaginase: an N-terminal nucleophile hydrolase. Acta Crystallogr.D.Biol.Crystallogr. Cui, T., Liao, P.H., Guan, C.and Guo, H.C.
2003 Purification and characterization of the beta-trefoil fold protein barley alpha-amylase/subtilisin inhibitor overexpressed in Escherichia coli Protein Expr. Purif. Bonsager, B.C., et al.
1995 Purification and characterization of novel glycosidases from the bacterial genus Xanthomonas. Glycobiology Wong-Madden, S.T., and Landry, D.
1995 Purification and characterization of C.BamHI, a regulator of the BamHI restriction-modification system. Gene Sohail, A., Ives, C.L., and Brooks, J.E.
2003 Purification and characterisation of a novel DNA methyltransferase, M.AhdI Nucleic Acids Research Marks, P., McGeehan, J., Wilson, G., Errington, N. and Kneale, G.
1987 Purification and assay of Type II DNA methylases. Methods Enzymol. Nelson, M., and McClelland, M.
2001 PubMed Central: The GenBank of the Published Literature. Proc.Natl.Acad.Sci. Roberts, R.J.
2003 PspGI, a type II restriction endonuclease from the extreme thermophile Pyrococcus sp.: structural and functional studies to investigate an evolutionary relationship with several mesophilic restriction enzymes. J.Mol.Biol. Pingoud, V., Conzelmann, C., Kinzebach, S., Sudina, A., Metelev, V., Kubareva, E., Bujnicki, J.M., Lurz, R., Luder, G., Xu, S.Y.and Pingoud, A
2014 Proteomic identification of mammalian cell-surface derived glycosylphosphatidylinositol anchored proteins through selective glycan enrichment Proteomics Cortes LK, Vainauskas S, Dai N, McClung CM, Shah M, Benner JS, Jr IR, VerBerkmoes NC, Taron CH
2015 Proteomic Analysis Reveals Aberrant O-GlcNAcylation of Extracellular Proteins from Breast Cancer Cell Secretion Mol Biol Cell Netsirisawan P., Chokchaichamnankit D., Srisomsap C., Svasti J., Champattanachai V.
2014 Protein-protein interactions leading to the recruitment of the host DNA sliding clamp by the hyperthermophilic archaeal virus SIRV2 J Virol Gardner AF, Bell SD, White MF, Prangishvili D, Krupovic M
1999 Protein-Modulated DNA Electron Transfer. J.Am.Chem.Soc. Rajski, S.R., Kumar, S., Roberts, R.J.and Barton, J.K.
2005 Protein-functionalized polymer brushes Biomacromolecules Tugulu S. et al.
2001 Protein trans-Splicing To Produce Herbicide-Resistant Acetolactate Synthase. Appl.Environ.Microbiol. Sun, L., Ghosh, I., Paulus, H.and Xu, M.Q.
2003 Protein trans-splicing in transgenic plant chloroplast: Reconstruction of herbicide resistance from split genes. Proc.Natl.Acad.Sci.USA Chin, H.G., Kim, G.D., Marin, I., Mersha, F., Evans, T.C.Jr., Chen, L., Xu, M.-Q.and Pradhan, S.
1998 Protein trans-splicing and functional mini-inteins of a cyanobacterial dnaB intein. Biochim.et Biophys.Acta Wu, H., Xu, M-Q and Liu, X-Q
2000 Protein trans-Splicing and Cyclization by a Naturally Split Intein from the dnaE Gene of Synechocystis Species PCC6803. J.Biol.Chem. Evans, T.C., Martin, D., Kolly, R., Panne, D., Sun, L., Ghosh, I., Chen, L., Benner, J., Liu, X-Q and Xu, M-Q
2005 Protein synthesus by pure translation systems Methods Shimizu, Y. Kanamori, T. and Ueda, T.
2014 Protein synthesis using a reconstituted cell-free system Curr Protoc Mol Biol Tuckey C, Asahara H, Zhou Y, Chong S
2007 Protein synthesis in liposomes with a minimal set enzymes Biochem. Biophys. Res. Commun.  Murtas, G., Kuruma, Y., Bianchini, P., Diaspro, A., and Luisi, P.L.
2014 Protein splicing: how inteins escape from precursor proteins J Biol Chem Mills KV, Johnson MA, Perler FB
1996 Protein Splicing: Evidence for an N-O Acyl Rearrangement as the Initial Step in the Splicing Process. Biochemistry Shao, Y., Xu, M.Q., and Paulus, H.
1995 Protein splicing: Chracterization of the aminosuccinimide residue at the carboxyl terminus of the excised intervening sequence. Biochemistry Shao, Y., Xu, M.Q.and Paulus, H.
1994 Protein splicing: an analysis of the branched intermediate and its resolution by succinimide formation. EMBO J. Xu, M.Q., Comb, D.G., Paulus, H., Noren, C.J., Shao, Y., and Perler, F.B.
2009 Protein Splicing: A Versatile Tool for Drug Discovery. Adv.Drug Deliv.Rev. Cheriyan, M.and Perler, F.B.
2001 Protein splicing. Encyclopedia of Genetics Xu, M.Q., Chong, S.and T.C.Evans, Jr.
1992 Protein splicing removes intervening sequences in an archaea DNA polymerase. Nucl.Acids Res. Hodges, R.A., Perler, F.B., Noren, C.J., and Jack, W.E.
1997 Protein Splicing of the Saccharomyces cerevisiae VMA Intein without the Endonuclease Motifs*. J Biol.Chem. Chong, S., and Xu, M.Q.
2002 Protein Splicing of the Deinococcus radiodurans Strain R1 Snf2 Intein. J.Bacteriol. Southworth, M.W.and Perler, F.B.
1998 Protein Splicing of inteins and hedgehog autoproteolysis: structure, function and evolution. Cell Perler, F.B.
2006 Protein splicing mechanisms and applications. IUBMB Life Perler, F.B.
1996 Protein splicing involving the Saccharomyces cerevisiae VMA intein.The steps in the splicing pathway, side reactions leading to protein cleavage, and establishment of an in vitro splicing system. J.Biol.Chem. Chong, S., Shao, Y., Paulus, H., Benner, J., Perler, F.B., and Xu, M.Q.
2000 Protein Splicing in the Absence of an Intein Penultimate Histidine. J.Biol.Chem. Chen, L., Benner, J.and Perler, F.
2006 Protein splicing in cis and in trans. The Chemical Record Saleh, L.and Perler, F.B.
1994 Protein splicing elements: inteins and exteins - a definition of terms and recommended nomenclature. Nucl.Acids Res. Perler, F.B., Davis, E.O., Dean, G.E., Gimble, F.S., Jack, W.E., Neff, N., Noren, C.J., Thorner, J., and Belfort, M.
2005 Protein Splicing Elements and Plants: From Transgene Containment to Protein Purification. Plant Biol. Evans, T.C., Jr., Xu, M.-Q.and Pradhan, S.
2000 Protein splicing and its applications. Curr.Opin.Biotech. Perler, F.B.and Adam, E.
2001 Protein splicing and its aplications. Genet.Eng.(NY) Giriat, I., Muir, T.W.and Perler, F.B.
1997 Protein splicing and autoproteolysis mechanisms. Curr.Opin.Chem.Biol. Perler, F.B., Xu, M.-Q.and Paulus, H.
2010 Protein mediated miRNA detection and siRNA enichment using p19. BioTechniques Jin, J., Cid, M., Poole, C.B.and McReynolds, L.A.
2006 Protein function microarrays based on self-immobilizing and self-labeling fusion proteins ChemBioChem. Sielaff I. et al.
2006 Protein function microarrays based on self-immobilizing and self-labeling fusion proteins ChemBioChem. Sielaff I. et al.
2013 Protein engineering: single or multiple site-directed mutagenesis Methods Mol Biol. Hsieh, P.C. and Vaisvila, R.
2009 Protein conjugates of SH3-domain ligands and ATP- competitive inhibitors as bivalent inhibitors of protein kinases ChemBioChem. Tivari R. and Parang K.
2005 Protein chemistry on the surface of living cells Chembiochem. Johnsson N. et al.
1987 Protective immunity to Brugia malayi larvae in BALB/c mice: potential of this model for the identification of protective antigens. Am.J.Trop.Med.Hyg. Carlow, C.K.S., and Philipp, M.
1993 Protecting Recognition Sequences on DNA by a Cleavage-Deficient Restriction Endonuclease. BioTechniques Xu, S., and Schildkraut, I.
2014 Prospective identification of parasitic sequences in phage display screens Nucleic Acids Res Matochko WL, Cory Li S, Tang SK, Derda R Phage Display
2006 Properties of the C-terminal domain of enzyme I of the Escherichia coli phosphotransferase system. J Biol Chem. Patel, H.V., Vyas, K.A., Mattoo, R.L., Southworth M., Perler, F.B., Comb, D.and Roseman, S.
1987 Properties and uses of restriction endonucleases. Methods Enzymol. Brooks, J.E.
2007 Propagation of centromeric chromatin requires exit from mitosis  J. of Cell Bio. Jansen L. et al
2013 Prokaryotic super program advisory committee DOE Joint Genome Institute, Walnut Creek, CA, March 27, 2013 Stand Genomic Science Garrity, G.M. Banfield, J., Eisen, J., van der Lelie, N., McMahon, T., Rusch, D., Delong, E., Moran, M.A., Currie, C., Fuhrman, J., Hallam, S., Hugenholtz, P., Moran, N., Nelson, K., Roberts, R., Stepanauskas, R.
2006 Profluorescent protein fragments for fast bimolecular fluorescence complementation in vitro Nat. Protoc. Demidov, V.V., and Broude, N.E.
2009 Profiling the T-cell receptor beta-chain repertoire by massively parallel sequencing Genome Res. Freeman, J.D., Warren, R.L., Webb, J.R., Nelson, B.H. and Holt, R.A.
2016 Profiling of core fucosylated N-glycans using a novel bacterial lectin that specifically recognizes α1,6 fucosylated chitobiose. Sci Rep. Vainauskas, S., Duke, R.M., McFarland, J., McClung, C., Ruse, C. and Taron, C.H.
2005 Productive interaction of chaperones with substrate protein domains allows correct folding of the downstream GFP domain. Gene Zhang, A., Cantor, E.J., Barshevsky, T.and Chong, S.
Production of disulfide-bonded proteins in Escherichia coli Berkmen, M.
2014 Production of Disulfide-Bonded Proteins in Escherichia coli Curr Protoc Mol Biol Ke N, Berkmen M
2012 Production of disulfide-bonded proteins in Escherichia coli Protein Expression and Purification Berkmen, M.
2015 Production of bioactive chicken (Gallus gallus) follistatin-type proteins in E. coli Sci Rep Lee S.B., Park S.K., Kim Y.S.
2015 Production of a Highly Protease-Resistant Fungal α-Galactosidase in Transgenic Maize Seeds for Simplified Feed Processing Sci Rep Yang W., Zhang Y., Zhou X., Zhang W., Xu X., Chen R., Meng Q., Yuan J., Yang P., Yao B.
2006 Production and purification of recombinant human glucagons overexpressed as intein fusion protein in Escherichia coli Protein Pept. Lett. Esipov, R.S., et. al.
2004 Producing peptide arrays for epitope mapping by intein-mediated protein ligation. BioTechniques Sun, L., Rush, J., Ghosh, I., Maunus, J.R.and Xu, M.Q.
2014 Procerain B, a cysteine protease from Calotropis procera, requires N-terminus pro-region for activity: cDNA cloning and expression with pro-sequence. Protein Expr Purif Vidhyadhar Nandana, Sushant Singh, Abhay Narayan Singh, Vikash Kumar Dubey High-Fidelity PCR
2015 Probing the Run-On Oligomer of Activated SgrAI Bound to DNA PLoS One Shah, S., Sanchez, J., Stewart, A., et al. Cloning & Synthetic Biology,DNA Preparation,Restriction Enzyme Digestion,Restriction Enzyme Digestion
2014 Probing homodimer formation of epidermal growth factor receptor by selective crosslinking Eur J Med Chem Sun X, Dusserre-Bresson F, Baker B, Zhang A, Xu P, Fibbe C, Noren CJ, Corrêa IR Jr, Xu MQ
2009 Prion protein glycosylation is not required for strain-specific neurotropism  J Virol.  Piro, J.R., Harris, B.T., Nishina, K., Soto, C., Morales, R., Rees, J.R., Supattapone, S.
2005 Preparation of an immunoadsorbent coupled with a recombinant antigen to remove anti-acetylcholine receptor antibodies in abnormal serum. J.Immunol.Methods Guo, C.Y., Li, Z.Y., Xu, M.Q.and Yuan, J.M.
2015 Pre-Steady-State Kinetic Analysis of a Family D DNA Polymerase from Thermococcus sp. 9°N Reveals Mechanisms for Archaeal Genomic Replication and Maintenance J Biol Chem Schermerhorn KM, Gardner AF
2015 Pre-steady-state Kinetic Analysis of a Family D DNA Polymerase from Thermococcus sp. 9°N Reveals Mechanisms for Archaeal Genomic Replication and Maintenance J Biol Chem Schermerhorn KM, Gardner AF.
2010 Potential amyloid plaque-specific peptides for the diagnosis of Alzheimer's disease Neurobiol. Aging. Larbanoix, L. et al.
1996 Potent Inhibition Of T7 Rna-Polymerase With A Truncated T7 Promoter. Abstracts Of Papers Of The American Chemical Society Noren, C.J., and Moreira, R.F.
2011 Potent Anti-Tumor Effect Generated by a Novel Human Papilllomavirus (HPV) Antagonist Peptide Reactivating the pRb/E2F Pathway PLoS One Guo, C.P. et al.
2006 Post-translational covalent labeling reveals heterogeneous mobility of individual G protein-coupled receptors in living cells ChemBioChem Prummer M. et al.
2015 Population genomic evidence for adaptive differentiation in Baltic Sea three-spined sticklebacks. BMCBiol. Guo B, DeFaveri J, Sotelo G, Nair A, Merilä J.
2014 Polynucleotide 3'-terminal phosphate modifications by RNA and DNA ligases Journal of Biological Chemistry Alexander M. Zhelkovsky and Larry A. McReynolds
2010 Polymerase-endonuclease amplification reaction (PEAR) for large-scale enzymatic production of anitsense oligonucleotices. PLoS ONE Wang, X., Gou, D.and Xu, S.Y.
2012 Polbase: a repository of biochemical, genetic and structural information about DNA polymerases. Nucl.Acids Res. Langhorst, B.W., Jack, W.E., Reha-Krantz, L.and Nichols, N.M.
2012 Polbase: a repository of biochemical, genetic and structural information about DNA polymerases Nucleic Acids Res. Langhorst, B.W., Jack. W.E., Reha-Krantz, L. and Nichols, N.M.
1999 Plasmodium vivax, P.cynomolgi, and P.knowlesi: Identification of Homologue Proteins Associated with the Surface of Merozoites. Exp.Parasitol. Barnwell, J.W., Galinski, M.R., DeSimone, S.G., Perler, F.and Ingravallo, P.
2016 Plasmid-based one-pot saturation mutagenesis Nature Methods Wrenbeck E.E., Klesmith J.R., Stapleton J.A., Adeniran A., Tyo K.E., & Whitehead T.A
1996 Plant methyltransferases and thier targets in the plant genome. In: Epigenetic Mechanisms of Gene Regulation Cold Spring Habor Laboratory Press Adams, R.L.P. Pradhan, S., Johnson, C.A, Lindsay, H., Shek, E.W.L., Jenkins, G.I., Urwin, N.A.R.
2016 Phytochromes function as thermosensors in Arabidopsis. Science Jung, J-H. et al.
2015 Physiologic Stresses Reveal a Salmonella Persister State and TA Family Toxins Modulate Tolerance to These Stresses PLoS One Silva-Herzog E, McDonald EM, Crooks AL, Detweiler CS.
2008 Physical and computational analysis of the yeast Kluyveromyces lactissecreted proteome Proteomics Swaim, C.L., et al.
2008 Physical and computational analysis of the yeast Kluyveromyces lactis secreted proteome. Proteomics Swaim, C., Anton, B., Sharma, S., Taron, C.and Benner, J.
2015 Phylogeny and differentiation of reptilian and amphibian ranaviruses detected in europe PLoS One Stöhr AC, López-Bueno A, Blahak S, Caeiro MF, Rosa GM, Alves de Matos AP, Martel A, Alejo A, Marschang RE
2005 Phylogenetic detection of conserved gene clusters in microbial genomes. BMC Bioinformatics Zheng, Y., Anton, B.P., Roberts, R.J.and Kasif, S.
1995 Photochemically initiated protein splicing. Angew.Chem.Int.Ed.Engl. Cook, S.N., Jack, W.E., Xiong, X., Danley, L.E., Ellman, J.A., Shultz, P.G., and Noren, C.J.
2008 Photobleaching-free infrared near-field microscopy localizes molecules in neurons J. App. Phys. Generosi J. et al.
2010 Photoactivatable and photoconvertible fluorescent probes for protein labeling ACS Chem. Biol. Asap Maurel D. et al.
1997 Phosphorylation Of The Casein Kinase II Domain Of B-50 (GAP-43) In Rat Cortical Growth Cones. J.Neurochem.(US) Edgar, M.A., Pasinelli, P., DeWit, M., Anton, B., Dokas, L.A., Pastorino, L., DiLuca, M., Cattabeni, F., Gispen, W.H.and DeGraan, P.N.
2003 Phosphorylation of eIF4E attenuates its interaction with mRNA 5' cap analogs by electrostatic repulsion: intein-mediated protein ligation strategy to obtain phosphorylated protein RNA Zuberek, J., et al.
2014 Phosphorylation decreases ubiquitylation of the thiazide-sensitive cotransporter NCC and subsequent clathrin-mediated endocytosis J Biol Chem Rosenbaek LL, Kortenoeven ML, Aroankins TS, Fenton RA Glycobiology
2010 Phosphopantetheinyl Transferase-Catalyzed Formation of Bioactive Hydrogels for Tissue Engineering J. Am. Chem. Soc. Mosiewicz, K. A. et al.
2007 Phosphatase Assays Using Ligated Phosphoprotein Substrates. Nature Protocols Sun, L., Ghosh, I., Kochinyan, S.and Xu.M.Q.
2016 Phenotypic and molecular analysis of the effect of 20-hydroxyecdysone on the human filarial parasite Brugia malayi. Int J Parasitol Mhashilkar, A.S., Adapa, S.R., Jiang, R.H., Williams, S.A., Zaky, W., Slatko, B.E., Luck, A.N., Moorhead, A.R. and Unnasch, T.R.
2016 Phenotypic and molecular analysis of the effect of 20 hydroxyecdysone on the human filarial parasite Brugia malayi Int J Parasitol Mhashilkar, A.S., Adapa, S.R., Jiang, R.H., Williams, S.A., Zaky, W., Slatko, B.E., Luck, A.N., Moorhead, A.R. and Unnasch, T.R.
2010 Phage display-derived peptides for osteosarcoma imaging Clin. Cancer Res. Sun, X. et al.
2010 Phage display probes for imaging early response to bevacizumab treatment Amino Acids Cao, Q. et al. Phage Display
2000 Phage Display of Selenopeptides. J.Amer.Chem.Soc. Sandman, K.E., Benner, J.S.and Noren, C.J.
2016 Perpetuating the homing endonuclease life cycle: identification of mutations that modulate and change I-TevI cleavage preference. Nucleic Acids Res. Roy, A.C., Wilson, G.G. and Edgell, D.R.
2016 Perpetuating the homing endonuclease life cycle: identification of mutations that modulate and change I-TevI cleavage preference Nucleic Acids Res. Roy, A.C., Wilson, G.G. and Edgell, D.R.
2011 Permanent Genetic Resources added to Molecular Ecology Resources Database 1 April 2011-31 May 2011. Mol Ecol Resour. Molecular Ecology Resources Primer Development Consortium, Bonizzoni, M., Bourjea, J., Chen, B., Crain, B.J., Cui, L., Fiorentino, V., Hartmann, S., Hendricks, S., Ketmaier, V., Ma, X., Muths, D., Pavesi, L., Pfautsch, S., Rieger, M.A., Santonastaso, T., Sattabongkot, J., Taron, C.H., Taron, D.J., Tiedemann, R., Yan, G., Zheng, B.and Zhong, D.
2010 Peptides from phage display library modulate gene expression in mesenchymal cells and potentiate osteogenesis in unicortical bone defects Vis. Exp. Balian, G. et al. Phage Display
2010 Peptide ligands that use a novel binding site to target both TGF-β receptors Mol. Biosyst. Li, L. et al.
2014 PCR amplification of a triple-repeat genetic target directly from whole blood in 15 minutes as a proof-of-principle PCR study for direct sample analysis for a clinically relevant target BMC Med Genet Connelly CM1, Porter LR2, TerMaat JR
2005 Parasitic nematodes have two distinct chitin synthases. Mol.Biochem.Parasitol. Foster, J.M., Zhang, Y., Kumar, S.and Carlow, C.
1999 Parasitic helminth genomics. Exp.Parasitol. Blaxter, M., Aslett, M., Guiliano, D., Daub, J.and The Filarial Genome Project
1995 Parasite Cyclophilins and Antiparasite Activity of Cyclosporin A. Parasitology Today Page, A.P., Kumar, S., and Carlow, C.K.S.
2014 p19-mediated enrichment and detection of siRNAs Methods Mol Biol Jin J, McReynolds LA, Gullerova M
2012 Oxidative folding of proteins in Escherichia coli BioProcess International Berkmen, M.
2012 Oxidative folding of proteins in Escherichia coli BioPharm International Berkmen, M.
2015 Overview of Target Enrichment Strategies. current Protocols in Molecular Biology Kozarewa, I., Armisen, J., Gardner, A.F., Slatko, B.E. and Hendrickson, C.L.
2011 Overview of DNA Sequencing Strategies Curr.Protoc.Mol.Biol. Shendure, J.A., Porreca, G.J., Church, G.M., Gardner, A.F.Hendrickson, C.L., Kieleczawa, J.and Slatko, B.E.
2014 Overview of cell-free protein synthesis: historic landmarks, commercial systems, and expanding applications Curr Protoc Mol Biol Chong S
1991 Overexpression, purification and crystallization of BamHI endonuclease. Nucl.Acids Res. Jack, W.E., Greenough, L., Dorner, L.F., Xu, S.Y., Strzelecka, T., Aggarwal, A.K., and Schildkraut, I.
1997 Overexpression of BsoBI restriction endonuclease in E.coli, purification of the recombinant BsoBI, and identification of catalytic residues of BsoBI by random mutagenesis. Gene Ruan, H., Lunnen, K.D., Pelletier, J.J., and Xu, S.Y.
2011 Overexpression and purification of U24 from human herpesvirus type-6 in E. coli: unconvential use of oxidizing environments with a maltose binding protein-hexahistidine dual tag to enhance membrane protein yield Microbial Cell Factories Tait, A.R. and Straus, S.K.
2008 Orthologues of the Drosophila melanogaster E75 molting control gene in the filarial parasites Brugia malayi and Dirofilaria immitis. Mol.Biochem.Parasitol. Crossgrove, K., Maina, C.V., Robinson-Rechavi, M.and Lochner, M.C.
1995 Orphon spliced-leader sequences form part of a repetitive element in Angiostrongylus cantonensis. Nucl.Acids Res. Joshua, G.W., Perler, F.B., and Wang, C.C.
1991 Organization of restriction-modification systems. Nucl.Acids Res. Wilson, G.G.
1994 Organization and sequence of the SalI restriction-modification system. Gene Rodicio, M.R., Quinton-Jager, T., Moran, L.S., Slatko, B.E., and Wilson, G.G.
1994 Organization and sequence of the HpaII restriction-modification system and adjacent genes. Gene Kulakauskas, S., Barsomian, J.M., Lubys, A., Roberts, R.J., and Wilson, G.G.
1992 Organization and function of the mcrBC genes of Escherichia coli K-12. Mol.Microbiol Raleigh, E.A.
2010 Organelle-targetable fluorescent probes for imaging hydrogen peroxide in living cells via SNAP-tag protein labeling  J. Am. Chem. Soc. Srikun, D. et al.
2008 Organelle-specific zinc detection using zinpyr-labeled fusion proteins in live cells J. Am. Chem. Soc. Tomat, E. et al.
2014 Ordering of mutations in preinvasive disease stages of esophageal carcinogenesis Nat Genet Weaver JM, Ross-Innes CS, Shannon N, Lynch AG, Forshew T, Barbera M, Murtaza M, Ong CA, Lao-Sirieix P, Dunning MJ, Smith L, Smith ML, Anderson CL, Carvalho B, O'Donovan M, Underwood TJ, May AP, Grehan N, Hardwick R, Davies J, Oloumi A, Aparicio S, Caldas C, Eldridge MD, Edwards PA, Rosenfeld N, Tavaré S, Fitzgerald RC; OCCAMS Consortium
2011 Ordered and dynamic assembly of single spliceoseoms Science Hoskins, A. et al.
2010 Optimizing Clarification and Concentration Steps Using an Automated Process System and Design of Experiments (DoE). BioProcessing Journal Bowen, T.L., Blake, C., Cohen, D.R.and Walsh, K.
Optimization of Medium Composition for Production pf Recombinant
2011 Optimization of Medium Composition for Production of Recombinant Calf Chymosin from Kluyveromyces lactis in Submerged Fermentation J. of Northeast Agricultural University Feng, Z., et al.
2010 Optimization of enzymatic reaction conditions for generating representative pools of cDNA from small RNA. RNA Munafo, D.and Robb, B.
2009 Optimization of 454 sequencing library preparation from small amounts of DNA permits sequence determination of both DNA strands Biotechniques Maricic, T. and Pääbo, S.
2008 Optical lock-in detection of FRET using synthetic and genetically encoded optical switches Biophys. J. Mao S. et al.
2010 Open source tool for prediction of genome wide protein-protein interaction network based on ortholog information. Source Code for Biology and Medicine Pedamallu, C.and Posfai, J.
2016 One-pot system for synthesis, assembly, and display of functional single-span membrane proteins on oil-water interfaces Proc. Natl Acad Sci USA Yunker, P.J., Asahara, H., Hung, K.C., Landry, C., Arriaga, L.R., Akartuna, I., Heyman, J., Chong, S., Weitz, D.A.
2000 One step purification of recombinant human Neurotrophic factor-3 with the splicing function of intein. Chin.J.Biochem.Mol.Biol. Yuan, J.M., Li, Z.Y., Wang, Y.M.and Xu., M.-Q.
2007 On the taxonomic status of the intracellular bacterium Wolbachia pipientis: should this species name include the intracellular bacteria of filarial nematodes? Int.J.Syst.Evol.Microbiol. Pfarr, K., Foster, J., Slatko B., Hoerauf, A.and Eisen, J.A.
1995 On the regulation and diversity of restriction in Esherichia coli. Gene Kelleher, J.E., and Raleigh, E.A.
1995 On base flipping. Cell Roberts, R.J.
2016 omplete Genome Sequence and Methylome Analysis of Bacillus globigii ATCC 49760. Genome Announc. Morgan, R.D.
2014 Objective: biochemical function Front Genet Anton BP, Kasif S, Roberts RJ, Steffen M
1990 Nucleotide sequence of the phage l gt11 SacI-KpnI lacZ region. Gene Moran, L.S., Maina, C.V., Poole, C.B., and Slatko, B.E.
1985 Nucleotide sequence of the PaeR7 restriction/modification system and partial characterization of its protein products. Nucl.Acids Res. Theriault, G., Roy, P.H., Howard, K.A., Benner, J.S., Brooks, J.S., Waters, A.F., and Gingeras, T.R.
1989 Nucleotide sequence of the FokI restriction-modification system: separate strand-specificity domains in the methyltransferase. Gene Looney, M.C., Moran, L.S., Jack, W.E., Feehery, G.R., Benner, J.S., Slatko, B.E., and Wilson, G.G.
1987 Nucleotide sequence of the DdeI restriction-modification system and characterization of the methylase protein. Nucl.Acids Res. Sznyter, L.A., Slatko, B., Moran, L., O'Donnell, K.H., and Brooks, J.E.
1995 Nucleotide sequence of a small plasmid isolated from Acetobacter pasteurianus. Gene Fomenkov, A., Xiao, J.P., and Xu, S.Y.
2001 Nuclear receptors in nematodes: themes and variations. Trends in Genetics Sluder, A.E.and Maina, C.V.
1985 Nuclear and Mitochondrial DNA of the Primate Malarial Parasite Plasmodium Knowlesi. Mol.Biochem.Parasitol. Williamson, D.H., Wilson, R.J., Bates, P.A., McCready, S., Perler, F., and Qiang, B.Q.
1998 Novel, sensitive and low-cost diagnostic tests for "river blindness" - detection of specific antigens in tears, urine and dermal fluid. Trop.Med.Inter.Health Ngu, J.L., Knenfou, C., Capuli, E., McMoli, T.E., Perler, F., Mbwagbor, J., Tumme, C., Nlatte, O.B., Donfack, J.and Asonganyi, T.
2015 Novel recA-Independent Horizontal Gene Transfer in Escherichia coli K-12 PLoS Kingston AW, Roussel-Rossin C, Dupont C, Raleigh EA.
2015 Novel recA-Independent Horizontal Gene Transfer in Escherichia coli K-12 PloS One Kingston, A. W., Roussel-Rossin, C., Dupont, C., Raleigh, E. A.
2010 Novel peptide-dendrimer conjugates as drug carriers for targeting nonsmall cell lung cancer Int. J. Nanomedicine Liu, J. et al.
2010 Novel peptide ligands that bind specifically to mouse embryonic stem cells Peptides Zhao, S. et al.
2016 Novel Methyltransferase Recognition Motif Identified in Chania multitudinisentens RB-25(T) gen. nov., sp. nov. Front Microbiol Ee, R., Lim, Y.L., Yin, W.F., See-Too, W.S., Roberts, R.J. and Chan, K.G.
2016 Novel m4C modification in type I restriction-modification systems. Nucleic Acids Res. Morgan, R.D., Luyten, Y.A., Johnson, S.A., Clough, E.M., Clark, T.A. and Roberts, R.J.
2008 Novel endo-alpha-N-acetylgalactosaminidases with broader substrate specificity. Glycobiology Koutsioulis, D., Landry, D.and Guthrie E.P.
2005 Novel carboxylated N-glycans contain oligosaccharide-linked glutamic acid Biochem. Biophys. Res. Commun. Srikrishna, G., Brive, L., Freeze, H.H.
1987 NotI and SfiI: restriction endonucleases with octanucleotide recognition sequences. Methods Enzymol. Qiang, B.-Q., and Schildkraut, I.
2014 Notch signaling genes: myogenic DNA hypomethylation and 5-hydroxymethylcytosine Epigenetics Terragni, J., Zhang, G., Sun, Z., Pradhan, S., Song, L., Crawford, G.E., Lacey, M., Ehrlich, M.
1991 Nomenclature relating to restriction of modified DNA in Escherichia coli. J.Bacteriol. Raleigh, E.A., Benner, J., Bloom, F., Braymer, H.D., DeCruz, E., Dharmalingam, K., Heitman, J., Noyer-Weidner, M., Piekarowicz, A., Kretz, P.L., Short, J.M., and Woodcock, D.
1988 Nomenclature for bacterial genes coding for class-II restriction endonucleases and modification methyltransferases. Gene Szybalski, W., Blumenthal, R.M., Brooks, J.E., Hattman, S., and Raleigh, E.A.
2007 NMR assignment of a KlbA intein precursor from Methanococcus jannaschii. Biomol NMR Johnson, M., Southworth, M.Perler, F.and Wuthrich, K.
2017 NicE-seq: High resolution open chromatin profiling Genome Biology Ponnaluri, V.K.C., Zhang, G., Estève, P.-O., Spracklin, G., Sian, S., Xu, S.-Y., Benoukraf, T., Pradhan, S.
2011 Next-gen expression systems Ritter, A.
2009 New Simulated Annealing Algorithms for Constrained Optimization. Asia-Pacific Journal for Operational Research Ozdamar, L.and Pedamallu.C.S.
2011 New Clues in the Allosteric Activation of DNA Cleavage by SgrAI; Structures of SgrAI Bound to Cleaved Primary Site DNA and Uncleaved Secondary Site DNA. Acta Crystallogr.F.Structural biology and crystallization communications Little, E.J., Dunten, P.W., Bitinaite, J.and Horton, N.C.
2007 New and easy strategy for cloning, expression, purification, and characterization of the 5S subunit of transcarboxylase from Propionibacterium f. shermanii Prep. Biochem. Biotechnol. Bhat, R. K. and Berger, S.
2014 Neurospora crassa Female Development Requires the PACC and Other Signal Transduction Pathways, Transcription Factors, Chromatin Remodeling, Cell-To-Cell Fusion, and Autophagy PLoS One Chinnici JL, Fu C, Caccamise LM, Arnold JW, Free SJ Gibson Assembly®
2009 Neuroprotective secreted amyloid precursor protein acts by disrupting amyloid precursor protein dimers J. Biol. Chem. Gralle M. et al.
2012 Nematode-Bacterium Symbioses - Cooperation and Conflict Revealed in the 'Omics' Age Biol. Bulletin Murfin, K., Dillman, A., Foster, J., Bulgheresi, S., Slatko, B., Sternberg, P. and Goodrich-Blair, H.
2003 NEBcutter: A program to cleave DNA with restriction enzymes. Nucl.Acids Res. Vincze, T., Posfai, J.and Roberts, R.J.
Near-Infrared Fluorescence Imaging of Mammalian Cells and Xenograft Tumors with SNAP-tag PLoS ONE Gong, H.; Kovar, J. L.; Baker, B.; Zhang, A.; Cheung, L.; Draney, D. R.; Corrêa, I. R., Jr.; Xu, M.-Q.; Olive, M. D.
2012 Near-infrared fluorescence imaging of mammalian cells and xenograft tumors with SNAP-tag PLoS ONE Gong, H. wt al.
1982 NdeI: a restriction endonuclease from Neisseria denitrificans which cleaves DNA at 5'-CATATG-3' sequences. FEBS Lett. Watson, R.J., Schildkraut, I., Qiang, B.Q., Martin, S.M., and Visentin, L.P.
2013 Natural Zinc Ribbon HNH Endonucleases and Engineered Zinc Finger Nicking Endonuclease Nucl Acids Res. Xu, S.Y. and Gupta, Y.K.
2011 Natural and engineered nicking endonucleases--from cleavage mechanism to engineering of strand-specificity. Nucl.Acids.Res. Chan, S.H., Stoddard, B.L.and Xu, S.Y.
2015 Na, K-ATPase α3 is a death target of Alzheimer patient amyloid-β assembly. Proc Natl Acad Sci U S A Ohnishi T., Yanazawa M., Sasahara T., Kitamura Y., Hiroaki H., Fukazawa Y., Kii I., Nishiyama T., Kakita A., Takeda H., Takeuchi A., Arai Y., Ito A., Komura H., Hirao H., Satomura K., Inoue M., Muramatsu S., Matsui K., Tada M., Sato M., Saijo E., Shigemitsu Y., Sakai S., Umetsu Y., Goda N., Takino N., Takahashi H., Hagiwara M., Sawasaki T., Iwasaki G., Nakamura Y., Nabeshima Y., Teplow D.B., Hoshi M.
1987 N4-Methylcytosine as a minor base in bacterial DNA. J.Bacteriol. Ehrlich, M., Wilson, G.G., Kenneth, C.K., and Gehrke, C.W.
2005 N-Glycans of Caenorhabditis elegans are specific to developmental stages J. Biol. Chem. Cipollo, J.F., Awad, A.M., Costello, C.E., Hirschberg, C.B.
2014 Myogenic differential methylation: diverse associations with chromatin structure Biology (Basel) Chandra S, Baribault C, Lacey M, Ehrlich M Epigenetics
1999 Mutations of endo-B-N-acetylglucosaminidase H active site residues Asp130 and Glu132: Activities and conformations. Protein Sci. Rao, V., Cui, T., Guan, C., and Van Roey, P.
2010 Mutations in the Caenorhabditis elegans eIF2{beta} Permit Translation Initiation From Non-AUG Start Codons. Genetics Zhang, Y, Maduzia, L.L.
2010 Mutations in maltose-binding protein that alter affinity and solubility properties. Appl Microbiol.Biotechnol. Walker, I.H., Hsieh, P.C.and Riggs, P.D.
2014 Mutations in four glycosyl hydrolases reveal a highly coordinated pathway for rhodopsin biosynthesis and N-glycan trimming in Drosophila melanogaster PLoS Genet Rosenbaum EE, Vasiljevic E, Brehm KS, Colley NJ Glycobiology
2011 Mutational and biochemical analysis of the DNA-entry nuclease EndA from Streptococcus pneumoniae Nucleic Acids Res. Midon, M., Schäfer, P., Pingoud, A., Ghosh, M., Moon, A.F., Cuneo, M.J., London, R.E. and Meiss, G.
2004 Mutational Analysis of Protein Splicing, Cleavage, and Self-Association Reactions Mediated by the Naturally Split Ssp DnaE Intein. Biochemistry Nichols, N.M.and Evans, T.C.Jr.
2007 Mutant torsinA interferes with protein processing through the secretory pathway in DYT1 dystonia cells. Proc. Natl. Acad. Sci. USA. Hewett, J.W., Tannous, B., Niland. B.P., Nery, F.C., Zeng, J., Li, Y. and Breakefield, X.
2007 Mutant torsinA interferes with protein processing through the secretory pathway in DYT1 dystonia cells Proc. Natl. Acad. Sci. USA Hewett, J.W., Tannous, B., Niland, B.P., Nery, F.C., Zeng, J., Li, Y. and Breakefield, X.O.
2015 Multivalent site-specific phage modification enhances the binding affinity of receptor ligands Bioconjug Chem Beech, J., Saleh, L., Frentzel, J., Figler, H., Correa, I.R. Jr., Baker, B., Ramspacher, C., Marshall, M., Dasa, S., Linden, J., Noren, C.J. and Kelly, K.A.
2014 Multiplex genome engineering in human cells using all-in-one CRISPR/Cas9 vector system Sci Rep Sakuma T, Nishikawa A, Kume S, Chayama K, Yamamoto T Golden Gate Assembly
2002 Multiple pathways of Spx (YjbD) proteolysis in Bacillus subtilis J. Bacteriol Nakano, S., et al.
2005 Multicolor imaging of cell surface proteins J. Am. Chem. Soc. Vivero-Pol L. et al.
2010 Multichannel perfusion culture bioluminescence reporter system for longterm detection in living cells Anal. Biochem. Watanabe, T., Enomoto, T., Takahashi, M., Honma, S., Honma, K. and Ohmiya, Y.
2015 Multi-Dimensional Measurement of Antibody-Mediated Heterosubtypic Immunity to Influenza. Sci Rep Wang J., Hilchey SP., Hyrien O., Huertas N., Perry S., Ramanunninair M., Bucher D., Zand MS.
1998 Mu-Opioid Receptor Activates Signaling Pathways Implicated In Cell Survival And Translational Control. J.Biol.Chem. Polakiewicz, R.D., Schieferl, S.M., Gingras, A-C., Sonenberg, N.and Comb, M.J.
1988 MseI, a unique restriction endonuclease from Micrococcus species which recognizes 5'T^TAA 3'. Nucl.Acids Res. Morgan, R.D.
1989 MscI, a type II restriction endonuclease from Micrococcus species which recognizes 5' TGGCCA 3'. Nucl.Acids Res. Polisson, C.
2016 mRNA capping: biological functions and applications. Nucleic Acids Res Ramanathan, A., Robb, G.B. and Chan, S.H.
1987 Monoclonal antibody to a unique surface epitope of the human filaria Brugia malayi identifies infective larvae in mosquito vectors. Proc.Natl.Acad.Sci.USA Carlow, C.K.S., Franke, E.D., Lowrie, R.C.J., Partono, F., and Philipp, M.
1987 Monoclonal antibodies to parasite antigens: a rapid immunization protocol requiring small numbers of parasites. J.Parasitol. Carlow, C.K.S., Edwards, M.K., James, E.R., and Philipp, M.
2007 Molecular Mechanisms of Transactivation and Doxorubicin-mediated Repression of survivin Gene in Cancer Cells. J of Biological Chemistry Esteve, P.O., Chin, H.G.and Pradhan, S.
2008 Molecular Mechanism of Drug-Dependent Ribosome Stalling  Mol. Cell. Vazquez-Laslop, N., Thum, C., and Mankin, A.S.
2014 Molecular evolution of the Yap/Yorkie proto-oncogene and elucidation of its core transcriptional program Mol Biol Evol Ikmi A, Gaertner B, Seidel C, Srivastava M, Zeitlinger J, Gibson MC Gibson Assembly®
2014 Molecular evolution of the Yap/Yorkie proto-oncogene and elucidation of its core transcriptional program Mol Biol Evol Ikmi A, Gaertner B, Seidel C, Srivastava M, Zeitlinger J, Gibson MC Gibson Assembly®
1999 Molecular evolution of the Escherichia coli chromosome.V.Recombination patterns among strains of diverse origin. Genetics Milkman, R., Raleigh, E.A., McKane, M., Cryderman, D.and Pohlman, K.
2010 Molecular Evidence for a Functional Ecdysone Signaling System in Brugia malayi. PLoS Neglected Tropical Diseases Tzertzinis, G., Egana, A.L., Palli, S.R., Robinson-Rechavi, M., Gissendanner, C.R.,  Liu, C., Unnasch, T.R.and Maina, C.V.
2013 Molecular dissection of the methylome of Burkholderia cenocepacia J2315 FEBS J. Fomenkov, A., Clark, T., Spittle, K., Anton, B.M., Vincze, T., Korlach, J., Roberts, R.J.
2010 Molecular diagnosis of neonatal diabetes mellitus using next-generation sequencing of the whole exome PLoS One Bonnefond, A., Durand, E., Sand, O. et al
1994 Molecular Cloning of an Onchocerca volvulus Extracellular Cu-Zn Superoxide Dismutase. Infect.Immun. James, E.R., McLean, D.C.J., and Perler, F.B.
1996 Molecular cloning and expression of NlaIII restriction-modification system in E.coli. Gene Morgan, R.D., Camp, R.R., Wilson, G.G., and Xu, S.Y.
1999 Molecular characterization of FKBP13 from filarial parasites. Mol.Biochem.Parasitol. Ma, D.and Carlow, C.K.S.
1995 Molecular Characterization of a Cyclosporin A-Insensitive Cyclophilin from the Parasitic Nematode Brugia malayi. Biochemistry Page, A.P., Landry, D., Wilson, G.G., and Carlow, C.K.S.
2001 Molecular Biology Problem Solver: A Laboratory Guide Bonventre, J., Walsh, P.and Robinson, D.
2007 Molecular and biochemical characterization of nematode cofactor independent phosphoglycerate mutases. Mol.Biochem.Parasitol. Raverdy, S., Zhang, Y., Foster, J.and Carlow, C.
1998 Modulation of protein splicing of the saccharomyces cerevisiae vacuolar membrane ATPase intein. J.Biol.Chem. Chong, S., Williams, K.S., Wotkowicz, C.and Xu, M.Q.
2002 Modulation of postendocytic sorting of G protein-coupled receptors Science Whistler, J.L., Enquist, J., Marley, A., Fong, J., Gladher, F., Tsuruda, P., Murray, S.R., Von Zastrow, M.
2014 Modular assembly of designer PUF proteins for specific post-transcriptional regulation of endogenous RNA J Biol Eng Abil Z, Denard CA, Zhao H DNA Assembly and Cloning,Golden Gate Assembly
2014 Modification-dependent restriction endonuclease, MspJI, flips 5-methylcytosine out of the DNA helix Nucleic Acids Research Horton, J.R., Wang, H., Mabuchi, M.Y., Zhang, X., Roberts, R.J., Zheng, Y., Wilson, G.G., Cheng, X
2008 MmeI: a minimal Type II restriction-modification system that only modifies one DNA strand for host protection. Nucl.Acids.Res. Morgan, R.D.,  Bhatia, T.K., Lovasco, L.and Davis, T.B.
2007 Mining predicted essential genes of Brugaria malayi for nematode drug targets. PLoS ONE Kumar, S., Chaudhary, K., Foster, J., Novelli, J., Zhang, Y., Wang, S., Spiro, D., Ghedin, E.and Carlow.C.
2005 Mining nematode genome data for novel drug targets. Trends Parasitol. Foster, J.M., Zhang, Y., Kumar, S.and Carlow, C.K.S.
1995 Minimum duplex requirements for restriction enzyme cleavage near the termini of linear DNA fragments. BioTechniques Moreira, R.F., and Noren, C.J.
2015 Microscale purification of antigen-specific antibodies Sci Rep Brown EP., Normandin E., Osei-Owusu NY., Mahan AE., Chan YN., Lai JI., Vaccari M., Rao M., Franchini G., Alter G., Ackerman ME.
2015 microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach. Parasites & Vectors Macchiaroli, N. et al.
2014 Methyllysine reader plant homeodomain (PHD) finger protein 20-like 1 (PHF20L1) antagonizes DNA (cytosine-5) methyltransferase 1 (DNMT1) proteasomal degradation J Biol Chem Estève PO, Terragni J, Deepti K, Chin HG, Dai N, Espejo A, Corrêa IR Jr, Bedford MT, Pradhan S
2000 Methyl-specific DNA Binding by McrBC, a Modification-dependent Restriction Enzyme. J.Mol.Biol. Stewart, F.J., Panne, D., Bickle, T.A.and Raleigh, E.A.
2017 Methods for structural and functional analyses of intramembrane prenyltransferases in the UbiA superfamily Methods Enzymol Yang, Y., Ke, N., Liu, S., Li, W.
2010 Methods for detection and measurement of hydrogen peroxide inside and outside of cells Mol. Cells Rhee S. G. et al.
2016 Metagenomic analysis of bloodstream infections in patients with acute leukemia and therapy induced neutropenia. Sci Rep. Gyarmati, P. et al.
2012 Metagenome Projects (To be published as part of a proceedings volume based upon a presentation as presented at the VI Congreso Nicaraguense de Biotecnologia.) Slatko, B.
2016 Metabolic Incorporation of Azide Functionality into Cellular RNA. Chembiochem Nainar, S., Beasley, S., Fazio, M., Kubota, M., Dai, N., Correa, I.R. Jr. and Spitale, R.C.
2002 Merozoite surface protein-9 of Plasmodium vivax and related simian malaria parasites is orthologous to p101/ABRA of P.falciparum. Mol.Biochem.Parasitol. Vargas-Serrato, E., Barnwell, J.W., Ingravallo, P., Perler, F.B.and Galinski, M.R.
2003 Merging fluorescence resonance energy transfer and expressed protein ligation to analyze protein-protein interactions Anal. Biochem.  Scheibner, K.A., Zhang, Z. and Cole, P.A.
2009 Membrane proteins follow multiple pathways to the basolateral cell surface in polarized epithelial cells J. Cell Biol. Farr G. A. et al.
2008 Mediator links epigenetic silencing of neuronal gene expression with X-linked mental retardation. Mol.Cell Ding, N., Zhou, H., Esteve, P.O., Chin, H.G., Kim, S., Xu, X., Joseph, S.M., Friez, M.J., Schwartz, C.E., Pradhan, S.and Boyer, T.G.
2014 Mediated enrichment of siRNAs Methods in Molecular Biology Jin J., McReynolds L.A. and Gullerova M.
2003 Mechanistic and mutational studies of Escherichia coli molybdopterin synthase clarify the final step of molybdopterin biosynthesis J. Biol. Chem. Wuebbens, M. M. and Rajagopalan, K. V.
2002 Mechanistic and kinetic considerations of protein splicing. Chem.Rev. Evans, T.C., Jr.and Xu, M-Q
2017 Mechanism and timing of Mcm2-7 ring closure during DNA replication origin licensing Nat. Struct. Mol. Biol. Ticau, S., Friedman, L.J., Champasa, K., Correa, I.R., Jr., Gelles, J., Bell, S.P.
2005 Measurement of the contributions of 1-D and 3-D pathways to the translocation of a protein along DNA. Proc.Natl.Acad.Sci.USA Gowers, D.M., Wilson, G.G.and Halford, S.
1998 McrBs, a modulator peptide for McrBC activity. EMBO J. Panne, D., Raleigh E.A., Bickle, T.A.
1992 McrBC: a multisubunit GTP-dependent restriction endonuclease. J.Mol.Biol. Sutherland, E., Coe, L., and Raleigh, E.A.
1993 McrBC, a novel multisubunit GTP-dependent restriction endonuclease. J.Cell Biochem.Suppl. Raleigh, E., Dila, D., Sutherland, E., Kelleher, J., Moran, L., Slatko, B., and Briggs, P.
1988 McrA and McrB restriction phenotypes of some E.coli strains and implications for gene cloning. Nucl.Acids Res. Raleigh, E.A., Murray, N.E., Revel, H., Blumenthal, R.M., Westaway, D., Reith, A.D., Rigby, P.W.J., Elhai, J., and Hanahan, D.
2014 MBD4 cooperates with DNMT1 to mediate methyl-DNA repression and protects mammalian cells from oxidative stress Epigenetics Laget S, Miotto B, Chin HG, Estève PO, Roberts RJ, Pradhan S, Defossez PA
2014 Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types. Science Jaitin, DA., Kenigsberg, E., Keren-Shaul, H., Elefant, N., Paul, F., Zaretsky, I., Mildner, A., Cohen, N., Jung, S., Tanay, A. and Amit, I.
2010 Massively parallel sequencing of exons on the X chromosome identifies RBM10 as the gene that causes a syndromic form of cleft palate Am. J. Hum. Genet. Johnston, J.J., Teer, J.K., Cherukuri, P.F. et al
2013 Massively parallel characterization of restriction endonucleases Scopus Kamps-Hughes, N., Quimby, A., Zhu, Z., Johnson, E.A.
2012 Marine genome resource sustainability in Central America Electronic Journal of Biotechnology Huete-Perez, J.A., Roberts, R.J. and Quezada, F.
2016 Mapping the sex determination locus in the hāpuku (Polyprion oxygeneios) using ddRAD sequencing. BMC Genomics. Brown JK, Taggart JB, Bekaert M, Wehner S, Palaiokostas C, Setiawan AN, Symonds JE, Penman DJ.
2004 Manipulation of carrier proteins in antibiotic biosynthesis Chem. Biol. La Clair, J.J. et al.
2014 Mammalian epigenetic mechanisms IUBMB Life Zhang, G. and Pradhan, S.
2003 Mammalian DNA (cytosine-5) methyltransferases and their expression. Clin.Immunol. Pradhan, S.and Esteve P.-O.
2015 Mammalian DNA (cytosine-5) methyltransferase mechanisms and RNA-mediated inhibition for future therapies. Epigenetics Diagnostic Therapy Zhang, G., Esteve, P.O., Chin, H.G. and Pradhan, S
2015 Mammalian DNA (cytosine-5) methyltransferase mechanisms and RNA-mediated inhibition for future therapies. Epigenetics Diagnostic Therapy Zhang, G., Esteve, P.O., Chin, H.G. and Pradhan, S
2017 Macrocycle peptides delineate locked-open inhibition mechanism for micoorganism phosphoglycerate mutases Nat. Commun. Yu, H., Dranchak, P., Li, Zhiru, MacArthur, R., Munson, M.S., Mehzabeen, N., Baird, N.J., Battalie, K.P., Ross, D., Lovell, Sc., Carlow, C.K.S., Suga, H., Inglese, J.
1995 M.Hhal binds tightly to substrates containing mismatches at the target base. Nucl.Acids Res. Klimasauskas, S.and Roberts, R.J.
1989 M.FokI methylates adenine in both strands of its asymmetric recognition sequence. Gene Landry, D., Looney, M.C., Feehery, G.R., Slatko, B.E., Jack, W.E., Schildkraut, I., and Wilson, G.G.
2006 LT CI, a novel chymotrypsin inhibitor of the potato I family from the earthworm Lumbricus terrestris. Purification, cDNA cloning, and expression Comp. Biochem. Physiol B. Biochem. Mol. Biol. Wojtaszek, J., et al.
2014 Loop-mediated isothermal amplification for detection of nucleic acids Curr Protoc Mol Biol Tanner NA, Evans TC Jr. Isothermal Amplification
2010 Localizable and Highly Sensitive Calcium Indicator Based on a BODIPY Fluorophore Anal. Chem. Kamiya M. and Johnsson K.
2014 Live-cell reporters for fluorescence imaging Curr Opin Chem Biol Corrêa IR Jr.
2005 Live chemical reports from the cell surface Chem. Biol. Cravatt B.F.
1995 LITMUS: Multipurpose cloning vectors with a novel system for bidirectional in vitro transcription. BioTechniques Evans, P.D., Cook, S.N., Riggs, P.D., and Noren, C.J.
2010 Lipoprotein biosynthesis as a target for anti-Wolbachia treatment of filarial nematodes. Johnston, K.L., Wu, B., Guimaraes, A., Ford, L.Slatko, B.E.and Taylor, M.J.
2015 Linkage disequilibrium network analysis (LDna) gives a global view of chromosomal inversions, local adaptation and geographic structure. Mol Ecol Resour. Kemppainen P, Knight CG, Sarma DK, Hlaing T, Prakash A, Maung Maung YN, Somboon P, Mahanta J, Walton C.
2010 Lighting up multiprotein complexes: lessons from GPCR oligomerization Trends Biotechnol Ciruela F. et al.
1994 Ligand-induced conformational states of the cytosine-specific DNA methyltransferase M.HgaI-2. J.Mol.Biol. Baldwin, G.S., Kelly, S.M., Price, N.C., Wilson, G.G., Connolly, B.A., Artymiuk, P.J., and Hornby, D.P.
2010 Ligand regulation of the quaternary organization of cell surface M3 muscarinic acetylcholine receptors analyzed by fluorescence resonance energy transfer (FRET) imaging and homogenous time-resolved FRET J. Biol. Chem. Alvarez-Curto J. et al.
2015 Leaf margin phenotype-specific restriction-site-associated DNA-derived markers for pineapple (Ananas comosus L.). Breed Sci. Urasaki N, Goeku S, Kaneshima R, Takamine T, Tarora K, Takeuchi M, Moromizato C, Yonamine K, Hosaka F, Terakami S, Matsumura H, Yamamoto T, Shoda M.
2008 Le double jeu de l’épigénétique: Cible et acteur du cancer [Master and servant: epigenetic deregulations as a cause and a consequence of cancer.] Med Sci (Paris) Laget, S.and Defossez, P.A.
2009 Lateral transport of smoothened from the plasma membrane to the membrane of the cilium J. Cell Biol. Milenkovic L. et al.
2005 Labeling proteins with small molecules by site-specific posttranslational modification J Am Chem Soc Yin J. et al.
2004 Labeling of fusion proteins with synthetic fluorophores in live cells PNAS Keppler A. et al.
2004 Labeling of fusion proteins of O6-alkylguanine-DNA alkyltransferase with small molecules in vitro and in vivo Methods Keppler A. et al.
2010 Labeling cell structures and tracking cell lineage in zebrafish using SNAP-Tag Dev. Dynamics Campos, C. et al.
2015 Label-free single-cell protein quantification using a drop-based mix-and-read system. Sci. Rep. Abbaspourrad A, Zhang H, Tao Y, Cui N, Asahara H, Zhou Y, Yue D, Koehler SA, Ung LW, Heyman J, Ren Y, Ziblat R, Chong S, Weitz DA.
2005 Kluyveromyces lactis LAC4 promoter variants that lack function in bacteria but retain full function in K. lactis Appl. Environ. Microbiol. Colussi, P.A. and Taron, C.H.
2005 Kluyveromyces lactis LAC4 Promoter Variants That Lack Function in Bacteria but Retain Full Function in K.lactis. Appl.Environ.Microbiol. Colussi, P.A.and Taron, C.H.
2008 Kits and their unique role in molecular biology: a brief retrospective. BioTechniques Weiner, M.and Slatko, B.
2011 Kinetic study of de novo chromophore maturation of fluorescent proteins Anal. Biochem. Iizuka, R., Yamagishi-Shirasaki, M. and Funatsu, T.
2015 Kinetic pathway of 40S ribosomal subunit recruitment to hepatitis C virus internal ribosome entry site Proc Natl Acad Sci U S A Gabriele Fuchs, Alexey N Petrov, Caleb D Marceau, Lauren M Popov, Jin Chen, Sen E O'Leary, Richard Wang, Jan E Carette, Peter Sarnow, Joseph D Puglisi SNAP Cell,SNAP Surface
2011 Kinetic characterization of single strand break ligation in duplex DNA by T4 DNA Ligase. J Biol Chem. Lohman, G.J.S., Chen, L.and Evans, T.C., Jr.
2003 Kinetic analysis of the coordinated interaction of SgrAI restriction endonuclease with different DNA targets. J.Biol.Chem. Hingorani, K.and Bitinaite, J.
1999 KDR Activation in Astrocytic Neoplasms. Cancer Carroll, R.S., Zhang, J., Bello, L., Melnick, M.B., Maruyama, T.and Black, P.M.
2016 Jmjd2/Kdm4 demethylases are required for expression of Il3ra and survival of acute myeloid leukemia cells Genes & Dev Agger, K. et al.
1997 Jak1 kinase is required for cell migrations and anterior specification in zebrafish embryos. Proc.Natl.Acad.Sci.USA Conway, G., Margoliath, A., Wong-Madden, S., Roberts, R.J., and Gilbert, W.
2006 It Takes Two: Lessons From the First Nematode Wolbachia Genome Sequence. Issues in Infectious Disease Pfarr, K., J.Foster and B Slatko
2007 It Takes Two: Lessons From the First Nematode Wolbachia Genome Sequence. Wolbachia, A Bug's Life Pfarr, K., Foster, J.and Slatko, B.
1998 Isolation, Characterization and Baculovirus-Mediated Expression of the cDNA Encoding Cytosine DNA Methyltransferase from Pisum Sativum. Nuc.Acids Res. Pradhan, S., Cummings, M., Roberts, R.J.and Adams, R.L.P.
1995 Isolation of temperature-sensitive mutants of the BamHI restriction endonuclease. Gene Fomenkov, A., and Xu, S.Y.
2003 Isolation of BsoBI restriction endonuclease variants with altered substrate specificity. J.Mol.Biol. Zhu, Z., Zhou, J., Friedman, A.M.and Xu, S.-Y.
1991 Isolation of BamHI variants with reduced cleavage activities. J.Biol.Chem. Xu, S.Y., and Schildkraut, I.
1988 Isolation and properties of a new site specific endonuclease Bme142I from Bacillus megaterium Nucleic Acids Res. Fomenkov, A.I., Kramarov, V.M., Andreev, L.V., Mochalov, V.V., Smolyaninov, V.V., Matvienko, N.I.
2010 Isolation and initial application of a novel peptide that specifically recognizes the neural stem cells derived from rhesus monkey embryonic stem cells J. Biomol. Screen. Zhao, W. et al.
1987 Isolation and Identification of restriction endonuclease BstFI Nucl.Acids Res. Kong, H and Chen, Z.
1988 Isolation and characterization of restriction endonuclease BstYI from Bacillus stearothermophilus. FEBS Lett. Chen Z.and Kong, H.
1989 Isolation and characterization of restriction endonuclease BstFI and BstSI from Bacillus stearothermophilus. J.Fudan Univ.Natural Sci. Chen Z., Kong, H.and Wang, L.
2015 Islet Endothelial Cells Induce Glycosylation and Increase Cell-surface Expression of Integrin β1 in β Cells Mol Biol Cell Spelios MG., Olsen JA., Kenna LA., Akirav EM.
2015 Iron-induced Local Complement Component 3 (C3) Up-regulation via Non-canonical Transforming Growth Factor (TGF)-β Signaling in the Retinal Pigment Epithelium. J Biol Chem Yafeng Li, Delu Song, Ying Song, Liangliang Zhao, Natalie Wolkow, John W Tobias, Wenchao Song, Joshua L Dunaief Site Directed Mutagenesis,High-Fidelity PCR
2015 Involvement of the heterodimeric interface region of the nucleotide binding domain-2 (NBD2) in the CFTR quaternary structure and membrane stability Sci Rep Julien M., Chauvet S., Scheckenbach KE., Alfaidy N., Chanson M., Benharouga M.
1989 Introduction of prokaryotic HhaI DNA methyltransferase alters the phenotype of 3T3 cells. Proc.Am.Assoc.Cancer Res. Herman, J., Nelkin, B., Mabry, M., Wilson, G., and Baylin, S.
2011 Introduction and historical overview of DNA sequencing Curr. Prot. Mol. Biol. Nelson, F.K, et. al.
2011 Intravesicle Isothermal DNA Replication. BMC Res Notes Torino, D., Del Bianco, C., Ross, L., Ong, J.and Mansy, S.
2014 Intranasal mRNA nanoparticle vaccination induces prophylactic and therapeutic anti-tumor immunity Sci Rep Phua KK, Staats HF, Leong KW, Nair SK
2008 Intrabodies binding the proline-rich domains of mutant huntingtin increase its turnover and reduce neurotoxicity J. Neurosci.  Southwell, A.L. et al.
1992 Intervening sequences in an Archaea DNA polymerase gene. Proc.Natl.Acad.Sci.USA Perler, F.B., Comb, D.G., Jack, W.E., Moran, L.S., Qiang, B., Kucera, R.B., Benner, J., Slatko, B.E., Nwankwo, D.O., Hempstead, S.K., Carlow, C.K.S.and Jannasch, H.
2009 Interleukin-33 is biologically active independently of Caspase-1 cleavage J. Biol. Chem. Talabot-Ayer, D., Lamacchia, C., Gabay, C., and Palmer, G.
2013 Interdomain lateral gene transfer of an essential ferrochelatase gene in human parasitic nematodes Proc. Nat. Acad. Sci. Wu, B., Novelli, J., Jiang, D., Dailey, H.A., Landmann, F., Ford, L., Taylor, M.J., Carlow, C.K.S., Kumar, S., Foster, J.M. and Slatko, B.E.
2002 Inteins in microbial genomes: distribution, mechanism and function. Scientific World Journal 2 Southworth, M.W.and Perler, F.B.
2006 Intein-mediated in vitro synthesis of lipidated Ras proteins Chem. Commun. (Camb) Gottlieb, D., et al.
2001 Intein-mediated rapid purification of cre recombinase Protein Expr.Purif. Cantor, E.J.and Chong, S.
2004 Intein-mediated purification of a recombinantly expressed peptide Chem Commun (Camb) Pezza, J.A., Allen, K.N. and Tolan, D.R.
2003 Intein-mediated Protein Purification Methods and Tools in Biosciences and Medicine Chong, S.and Perler, F.B.
1999 Intein-Mediated Protein Ligation: Harnessing Nature's Escape Artists. Biopolymers Evans, T.C.and Xu, M-Q
2007 Intein-mediated peptide arrays for epitope mapping and kinase/phosphatase assays Methods Mol Biol Xu, M.Q., Ghosh, I., Kochinyan, S., Sun, L
2001 Intein-Mediated Ligation and Cyclization of Expressed Proteins. Methods Xu, M.Q.and T.C.Evans, Jr.
2004 Intein-mediated fusion expression, high efficient refolding, and one-step purification of gelonin toxin. Protein Expr.Purif. Guo, C.Y., Li, Z., Xu, M.Q., Wise, J.G., Trommer, W.E.and Yuan, J.
2004 Intein-mediated fusion expression, high efficient refolding, and one-step purification of gelonin toxin Protein Expr Purif. Guo, C., et al.
2007 Intein-mediated expression is an effective approach in the study of beta-defensins Biochem Biophys Res Commun Diao, H., et. al.
2002 Intein-mediated affinity-fusion purification of the Escherichia coliRecA protein Protein Expr. Purif.  Singleton, S. F., et al.
2014 Integration of growth and patterning during vascular tissue formation in Arabidopsis Science Bert De Rybel, Milad Adibi, Alice S. Breda, Jos R. Wendrich, Margot E. Smit, Ondej Novk, Nobutoshi Yamaguchi, Saiko Yoshida, Gert Van Isterdael, Joakim Palovaara, Bart Nijsse, Mark V. Boekschoten, Guido Hooiveld, Tom Beeckman, Doris Wagner, Karin Ljung, Christian Fleck, Dolf Weijers High-Fidelity PCR
2015 Insulin-like factor regulates neural induction through an IGF1 receptor-independent mechanism. Mol Biol Cell Haramoto Y., Takahashi S., Oshima T., Onuma Y., Ito Y., Asashima M.
2014 Insights into the initiation of JC virus DNA replication derived from the crystal structure of the T-antigen origin binding domain PLoS Pathog Meinke G, Phelan PJ, Kalekar R, Shin J, Archambault J, Bohm A, Bullock PA Gibson Assembly®
2014 Insights into bacterial CO2 metabolism revealed by the characterization of four carbonic anhydrases in Ralstonia eutropha H16 AMB Express Gai CS, Lu J, Brigham CJ, Bernardi AC, Sinskey AJ Gibson Assembly®
2002 Inhibition of poly(ADP-ribosyl)ation induces DNA hypermethylation: a possible molecular mechanism. FASEB J. Zardo, G., Reale, A., Passananti, C., Pradhan, S., Bountempo, S., DeMatteis, G., Adams, R.L.P.and Caiafa, P.
2001 Information access.Building a "GenBank" of the published literature. Science Roberts, R.J., Varmus, H.D., Ashburner, M., Brown, P.O., Eisen, M.B., Khosla, C., Kirschner, M., Nusse, R., Scott, M.and Wold, B.
2007 Influence of chelate conjugation on a newly identified tumor-targeting peptide J. Nucl. Med. Mier, W. et al.
1997 Induction of Parasite Antigen-Specific Antibody Responses in Unsensitized Human B Cells is Dependent on the Presence of Cytokines After T Cell Priming. J.Immunol. Garraud, O., Perler, F.B., Bradley, J.E., and Nutman, T.B.
2008 Inducing efficient cross-priming using antigen-coated yeast particles J. Immunother. Howland S.W. et al.
2007 Inducing and sensing protein-protein interactions in living cells by selective cross-linking Angew Chem. Int. Ed Lemercier, G. et al.
2003 Induced protein dimerizaton in vivo through covalent labeling JACS Gendreizig, S. et al.
2009 Indo-1 Derivatives for local calcium sensing JACS Chemical Biology Bannwarth et. al.
2016 Increasing Genome Sampling and Improving SNP Genotyping for Genotyping-by-Sequencing with New Combinations of Restriction Enzymes G3 Fu YB, Peterson G. W., Dong Y Restriction Enzyme Digestion,Restriction Enzyme Digestion
2013 Increasing cleavage specificity and activity of restriction endonuclease KpnI Nucleic Acids Research Kommireddy Vasu, Easa Nagamalleswari, Mai Zahran, Petra Imhof, Shuang-yong Xu, Zhenyu Zhu, Siu-Hong Chan, Valakunja Nagaraja
2016 Incipient sympatric speciation in Midas cichlid fish from the youngest and one of the smallest crater lakes in Nicaragua due to differential use of the benthic and limnetic habitats? Ecol Evol. Kautt AF, Machado-Schiaffino G, Torres-Dowdall J, Meyer A.
2008 Incidence of occult carcinoma in multinodular goiter using histopathological findings. Internet journal of surgery TM Pedamallu, R., Pedamallu, S.B., Rama Rao, K.V., and Pedamallu, C.S.
1999 InBase, the New England Biolabs Intein Database. Nuc.Acids Res. Perler, F.B.
2002 InBase, the Intein Database. Nuc.Acids Res. Perler, F.B.
2000 InBase, the Intein Database. Nuc.Acids Res. Perler, F.B.
2007 In vivo translation and stability of trans-spliced mRNAs in nematode embryos. Mol. Biochem. Parasitol. Cheng, G., Cohen, L., Mikhli, C, Jankowska-Anyszka, M., Stepinski, J., Darzynkiewicz, E. and Davis, R.E
2007 In vivo translation and stability of trans-spliced mRNAs in nematode embryos Mol. Biochem. Parasitol. Cheng, G., Cohen, L., Mikhli, C., Jankowska-Anyszka, M., Stepinski, J., Darzynkiewicz, E. and Davis, R.E.
2010 In vivo transfection of developmentally competent Brugia malayi infective larvae Int.J.Parasitol. Xu, S., Liu, C., Tzertzinis, G., Elodie Ghedin, E., Christopher, C., Evans, C.C., Kaplan, R.and Unnasch, T.R.
2010 In vivo oxidative protein folding can be facilitated by oxidation-reduction cycling. Mol.Microbiol. Shouldice, S.R., Cho, S.H., Boyd, D., Heras, B., Eser, M., Beckwith, J., Riggs, P., Martin, J.L.and Berkmen, M.
2012 In vivo incorporation of an azide labeled sugar analog to detect mammalian Carbohydrate Res. Vainauskas, S., Cortes, L.K. and Taron, C.H.
2007 In Vivo characterization of the GPI assembly defect in yeast   mcd4-174 mutants and bypass of the Mcd4-p-dependent step in mcd4∆ cells. FEMS Yeast Res. Wiedman, J.M., Fabre, A-L., Taron, B.W., Taron, C.H.and Orlean, P.
2006 In vivo characterization of the GPI assembly defect in yeast mcd4-174 mutants and bypass of the Mcd4p-dependent step in delta mcd4 cells. FEMS Yeast Res. Wiedman, J.M., Fabre, A-L., Taron, B.W., Taron, C.H.and Orlean, P.
2004 In vitro semisynthesis and applications of C-terminally modified Rab proteins Methods Mol Biol. Durek T., Goody R.S and Alexandrov K.
2010 In vitro genetic reconstruction of bacterial transcription initiation by coupled synthesis and detection of RNA polymerase holoenzyme Nucleic Acids Res. Asahara, H. and Chong, S.
2001 In vitro assembly of phytochrome B apoprotein with synthetic analogs of the phytochrome chromophore Proc. Natl. Acad. Sci. USA Hanzawa, H., et al.
2012 In vitro Transcription and Capping of Gaussia Luciferase mRNA Followed by HeLa Cell Transfection J. Vis. Exp. Jani, B. and Fuchs, R.
In vitro RNA interference and immunofluorescence-based phenotype analysis in a human parasitic nematode, Brugia malayi Parasites and Vectors Landmann, F., Foster, J.M., Slatko, B.E. and Sullivan, W.
1993 In vitro protein splicing of purified precursor and the identification of a branched intermediate. Cell Xu, M.Q., Southworth, M.W., Mersha, F.B., Hornstra, L.J., and Perler, F.B.
2010 In vitro genetic reconstruction of bacterial transcription initiation by coupled synthesis and detection of RNA polymerase holoenzyme. Nucl.Acids.Res. Asahara, H.and Chong, S.
2006 In vitro evidence for the dual function of Alg2 and Alg11: essential mannosyltransferases in N-linked glycoprotein biosynthesis Biochemistry O’Reilly, M.K., Zhang, G., Imperiali, B.
2008 Improved segmental isotope labeling methods for the NMR study of multidomain or large proteins: application to the RRMs of Npl3p and hnRNP L. J. Mol. Biol. Skrisovska, L. et al.
2005 Implications for Switching Restriction Enzyme Specificities from the Structure of BstYI Bound to a BglII DNA Sequence Structure Townson, S.A., Samuelson, J.C., Xu, S.Y.and Aggarwal, A.K.
2000 Implementation of Automation in a Small-Scale DNA Sequencing Core Facility. J.Biomolecular Techniques Ware, J.L., Moran, L., Lin, C.-L.and Slatko, B.
2014 Impact of a transposon insertion in phzF2 on the specialized metabolite production and interkingdom J Bacteriol Phelan VV, Moree WJ, Aguilar J, Cornett DS, Koumoutsi A, Noble SM, Pogliano K, Guerrero CA, Dorrestein PC Gibson Assembly®
1996 Immunoglobulin G Subclass Responses of Children during Infection with Onchocerca volvulus. Clinical and Diagnostic Laboratory Immunology Gbakima, A.A., Nutman, T.B., Bradley, J.E., McReynolds, L.A., Winget, M.D., Hong, Y., and Scott, A.L.
1988 IMMUNITY IN FILARIASIS: Perspectives for Vaccine Development. Ann.Rev.Microbiol. Philipp, M., Davis , T.B., Storey, N., and Carlow, C.K.S.
2016 Illuminating uveitis: metagenomic deep sequencing identifies common and rare pathogens. Genome Medicine Doan, T. et al.
2009 Illuminating the life of GPCRs Cell Commun. Signal Böhme I and Beck-Sickinger A. G.
2004 Identifying protein function - a call for community action. PLoS Biology Roberts, R.J.
2000 Identification of type II restriction and modification systems in Helicobacter pylori reveals their substantial diversity among strains. Proc.Natl.Acad.Sci.USA Xu, Q., Morgan, R.D., Roberts, R.J.and Blaser, M.J.
2008 Identification of two catalytic domains in a luciferase secreted by the copepod Gaussia princeps Biochem Biophys Res Commun. Inouye, S. and Sahara, Y.
2009 Identification of two active functional domains of human adenylate kinase 5 FEBS Lett. Solaroli, N., Panayiotou, C., Johansson, M., and Karlsson, A.
2000 Identification of the Metal-Binding Sites of Restriction Endonucleases by Fe2+-Mediated Oxidative Cleavage. Biochemistry Hlavaty, J.J., Benner, J.S., Hornstra, L.J.and Schildkraut, I.
2011 Identification of targeting peptides for ischemic myocardium by in vivo phage display J. Mol. Cell. Cardiol. Kanki, S. et al.
1992 Identification of surrogate rodent hosts for larval Onchocerca lienalis and induction of protective immunity in a model system. J Parasitol. Abraham, D., Eberhard, M.L., Lange, A.M., Yutanawiboonchai, W., Perler, F.B.and Lok, J.B.
2015 Identification of single nucleotide polymorphism markers associated with bacterial cold water disease resistance and spleen size in rainbow trout. Front Genet. Liu S, Vallejo RL, Palti Y, Gao G, Marancik DP, Hernandez AG, Wiens GD.
2014 Identification of restriction-modification systems of Bifidobacterium animalis subsp. lactis CNCM I-2494 by SMRT sequencing and associated methylome analysis PLoS One O'Connell Motherway M, Watson D, Bottacini F, Clark TA, Roberts RJ, Korlach J, Garault P, Chervaux C, van Hylckama Vlieg JE, Smokvina T, van Sinderen D
1995 Identification of recombinant filarial proteins capable of inducing polyclonal and antigen-specific IgE and IgG4 antibodies. J.Immunol. Garraud, O., Nkenfou, C., Bradley, J.E., Perler, F.B., and Nutman, T.B.
2009 Identification of nose-to-brain homing peptide through phage display Peptides Wan, X.M. et al.
2013 Identification of new proteins that modulate the germination of spores of bacillus species J Bacteriol Ramirez-Peralta A, Gupta S, Butzin XY, Setlow B, Korza G, Leyva-Vazquez MA, Christie G, Setlow P Gibson Assembly®
2012 Identification of genes containing ecdysone response elements in the genome of Brugia malayi Mol Biochem Parasitol Liu, C., Enright, T., Tzertzinis, G. and Unnasch, T.R.
2008 Identification of GATC- and CCGG-recognizing Type II REases and their putative specificity-determining positions using Scan2S--a novel motif scan algorithm with optional secondary structure constraints. Proteins Niv, M.Y., Skrabanek, L., Roberts, R.J., Scheraga, H.A.and Weinstein, H.
2016 Identification of Ecdysone Hormone Receptor Agonists as a Therapeutic Approach for Treating Filarial Infections. PLoS Negl Trop Dis. Mhashilkar, A.S., Vankayala, S.L., Liu, C., Kearns, F., Mehrotra, P., Tzertzinis, G., Palli, S.R., Woodcock, H.L. and Unnaschm, T.R.
1997 Identification of a thermophilic plasmid origin and its cloning within a new Thermus-E.coli shuttle vector. Gene Wayne, J., and Xu, S.Y.
2010 Identification of a novel muscle targeting peptide in mdx mice Peptides Seow, Y. et al.
1994 Identification of a new type-II restriction enzyme BsrGI from Bacillus stearothermophilus GR75 Chinese Sci. Bull. Chen, Z.F., Pan, X.S.
1990 Identification of a new type II restriction endonuclease BsaAI. Nucl.Acids Res. Kong, H., Morgan, R.D., and Chen, Z.
2010 Identification of a new peptide for fibrosarcoma tumor targeting and imaging in vivo J. Biomed. Biotechnol. Wu, C.C. et al.
2015 Identification of a Conserved Linear B-Cell Epitope of Streptococcus dysgalactiae GapC Protein by Screening Phage-Displayed Random Peptide Library PLoS One Zhang L., Zhang H., Fan Z., Zhou X., Yu L., Sun H., Wu Z., Yu Y., Song B., Ma J., Tong C., Wang X., Zhu Z., Cui Y.
2011 Identification of a chitin-induced small RNA that regulates translation of the tfoX gene, encoding a positive regulator of natural competence in Vibrio cholerae J Bacteriol. Yamamoto, S., Izumiya, H., Mitobe, J., Morita, M., Arakawa, E., Ohnishi, M. and Watanabe, H.
Identification of a cardiac specific protein transduction domain by in vivo biopanning using a M13 phage peptide display library in mice PLoS One Zahid, M. et al.
2010 Identification and Phylogenetic Analysis of Dirofilaria Ursi (Nematoda: Filarioidea) from Wisconsin Black Bears (Ursus americanus) and its Wolbachia Endosymbiont J Parasitol. Michalski, S., Bain, O., Fischer, K.Fishcher, P., Kumar, S.and Foster, J.
2007 Identification and evaluation of a new tumor cell-binding peptide J. Nucl. Med. Zitzman, S. et al.
2011 Identification and characterization of the cofactor-independent phosphoglycerate mutases of Dirofilaria immitis and its Wolbachia endosymbiont. Veterinary Parasitology Li.Z., Galvin, B., Raverdy, S.and Carlow, C.K.S.
2012 Identification and characterization of protein glycosylation using specific endo-and exoglycosidases Methods Mol Biol Magnelli, P., Bielik, A., Guthrie, E.
2011 Identification and characterization of protein glycosylation using specific endo- and exoglycosidases. Methods Mol.Biol. Magnelli, P., Bielik, A.and Guthrie, E.
2011 Identification and Characterization of Protein Glycosylation using Specific Endo- and Exoglycosidases J Vis Exp. Magnelli PE, Bielik AM, Guthrie EP.
2012 Identification and characterization of protein glycosylation using specific endo- and exoglycosidases Methods Mol Biol. Magnelli P, Bielik A, Guthrie E. 
2014 Identification and characterization of mutant clones with enhanced propagation rates from phage-displayed peptide libraries Anal Biochem Nguyen KT, Adamkiewicz MA, Hebert LE, Zygiel EM, Boyle HR, Martone CM, Meléndez-Ríos CB, Noren KA, Noren CJ, Hall MF
2014 Identification and characterization of mutant clones with enhanced propagation rates from phage-displayed peptide libraries Anal Biochem Nguyen KT, Adamkiewicz MA, Hebert LE, Zygiel EM, Boyle HR, Martone CM, Meléndez-Ríos CB, Noren KA, Noren CJ, Hall MF Phage Display
2014 Identification and Characterization of a Suite of Tumor Targeting Peptides for Non-Small Cell Lung Cancer Sci Rep McGuire MJ, Gray BP, Li S, Cupka D, Byers LA, Wu L, Rezaie S, Liu YH, Pattisapu N, Issac J, Oyama T, Diao L, Heymach JV, Xie XJ, Minna JD, Brown KC Phage Display
2014 Identification and Characterization of a Proteolytically Primed Form of the Murine Coronavirus Spike Proteins after Fusion with the Target Cell J Virol Wicht O, Burkard C, de Haan CA, van Kuppeveld FJ, Rottier PJ, Bosch BJ Glycobiology
2009 Identification and characterization of a peptide with affinity to head and neck cancer J. Nucl. Med. Nothelfer, E.M. et al.
2014 Identification and Biosynthesis of a Novel Xanthomonadin-Dialkylresorcinol-Hybrid from Azoarcus sp. BH72 PLoS One Schöner TA, Fuchs SW, Reinhold-Hurek B, Bode HB Gibson Assembly®
2011 Hypomethylation of a LINE-1 Promoter Activates an Alternate Transcript of the MET Oncogene in Bladders with Cancer PLoS Genet. Wolff, E.M. et al. Epigenetics
2001 Hyperthermophilic Inteins. Methods Enzymol. Perler, F.B.
2016 Hydroxymethyluracil modifications enhance the flexibility and hydrophilicity of double-stranded DNA. Nucleic acids research Carson, S., Wilson, J., Aksimentiev, A., Weigele, P. R., & Wanunu, M.
2001 Hybridization of High-Denisty Filter Arrays of a Brugia malayi BAC Library with Biotinylated Oligonucleotides and PCR Products. BioTechniques Foster, J.M., Kamal, I.H., Daub, J., Swan, M.C., Ingram, J.R., Ganatra, M., Ware, J., Guiliano, D., Aboobaker, A., Moran, L., Blaxter, M.and Slatko, B.E.
2000 Hybrid mouse-prokaryotic DNA (Cytosine-5) methyltransferase retain the specificity of the parental C-terminal domain. EMBO J. Pradhan, S and Roberts, R.J.
1989 Human T-cell stimulation, molecular characterization and in situ mRNA localization of a Brugia malayi recombinant antigen. Mol.Biochem.Parasitol. Arasu, P., Nutman, T.B., Steel, C., Mulligan, M.M., Abraham, D., Tuan, R.S., and Perler, F.B.
1997 Human T-Cell Lukemia Virus Type 1 Tax Releases Cell Cycle Arrest Induced by p16INK4a. J.Virol. Low, K.G., Dorner, L.F., Fernando, D.B., Grossman, J., Jeang, K.T., and Comb, M.J.
2004 Human Smp3p adds a fourth mannose to yeast and human glycosylphosphatidylinositol precursors in vivo. J.Biol.Chem. Taron, B.W., Colussi, P.A., Wiedman, J.M., Orlean, P.and Taron, C.H.
2015 Human sialic acid acetyl esterase: Towards a better understanding of a puzzling enzyme. Glycobiology Orizio F., Damiati E., Giacopuzzi E., Benaglia G., Pianta S., Schauer R., Schwartz-Albiez R., Borsani G., Bresciani R., Monti E.
2005 Human maintenance DNA (cytosine-5)-methyltransferase and p53 modulate expression of p53-repressed promoters. Proc.Natl.Acad.Sci.USA Esteve, P.O., Chin, H.G.and Pradhan, S.
1999 Human DNA (Cytosine-5) Methyltransferase.II.steady-state kinetics reveal allostericactivation by methylated DNA. J.Biol.Chem. Bacolla, A., Pradhan, S., Roberts, R.J.and Wells, R.D.
2009 Human condensin function is essential for centromeric chromatin assembly and proper sister kinetochore orientation PLoS One Samoshkin A. et al.
2009 HTRF: A technology tailored for drug discovery - a review of theoretical aspects and recent applications Curr. Chem. Genomics Degorce F. et al.
2008 HP1-mediated silencing targets Pol II coactivator complexes. Nat Struct Mol Biol. Smallwood, A., Black, J.C., Tanese, N., Pradhan, S.and Carey, M.
2005 How restriction enzymes became the workhorses of molecular biology. PNAS Roberts, R.J.
1998 How is modification of the DNA substrate recognized by the PvuII restriction endonuclease? Biol. Chem. Horton, J.R., Bonventre, J. and Cheng, X.
2016 Host-Associated Genomic Features of the Novel Uncultured Intracellular Pathogen Ca. Ichthyocystis Revealed by Direct Sequencing of Epitheliocysts. Genome Biol. Evol. Qi, W. et al.
1997 Homing endonucleases: keeping the house in order. Nucl.Acids Res. Belfort, M., and Roberts, R.J.
1994 Histone-encoding genes from Pyrococcus: evidence for members of the HMf family of archaeal histones in a non-methanogenic Archaeon*. Gene Sandman, K., Perler, F.B., and Reeve, J.N.
1991 Histochemical localization of gene expression in Onchocerca volvulus: in situ DNA histohybridization and immuno-cytochemistry. Mol.Biochem.Parasitol. Tuan, R.S., Shepley, K.J., M.M., M., Abraham, D., and Perler, F.B.
2017 Highly specific imaging of mRNA in single cells by target RNA-initiated rolling circle amplification Chem Sci Deng, Ruijie., Zhang, Kaixiang., Sun, Yupeng., Ren, Xiaojun., Li, Jinghong.
1987 Highly Repeated DNA Sequences as Species-specific Probes for Brugia. Parasitology Today Piessens, W.F., McReynolds, L.A.and Williams, S.A.
2006 Highly efficient ribosome display selection by use of purified components for in vitro translation J. Immunol Methods Villemagne, D., Jackson, R. and Douthwaite, J.A.
2015 Highly efficient CRISPR/Cas9-mediated TAR cloning of genes and chromosomal loci from complex genomes in yeast Nucleic Acids Res Lee, NC., Larionov, V., Kouprina, N.
2013 Highlights of the DNA cutters: a short history of the restriction enzymes Nucleic Acids Research Wil A. M. Loenen, David T. F. Dryden, Elisabeth A. Raleigh, Geoffrey G. Wilson, and Noreen E. Murray
2014 Highlights of the DNA cutters: a short history of the restriction enzymes Nucleic Acids Res Loenen WA, Dryden DT, Raleigh EA, Wilson GG, Murray NE
2013 High-throughput sequencing of methylated cytosine enriched by modification-dependent restriction endonuclease MspJI BMC Genetics Xiaojun Huang, Hanlin Lu, Jun-Wen Wang, Liqin Xu, Siyang Liu, Jihua Sun, Jun Wang, Fei Gao
2009 High-throughput quantitative analysis of plant N-glycan using a DNA sequencer Biochem. Biophys. Res. Commun.  Lee, K.J., Jung, J.H., Lee, J.M,, So, Y., Kwon, O., Callewaert, N., Kang, H.A., Ko, K., Oh, D.B.
2009 High-throughput quantitative analysis of plant N-glycan using a DNA sequencer Biochem. Biophys. Res. Commun. Lee, K.J., Jung, J.H., Lee, J.M., So, Y., Kwon, O., Callewaert, N., Kang, H.A., Ko, K., Oh, D.B.
2009 High-throughput bisulfite sequencing in mammalian genomes Methods Smith, Z.D., Gu, H., Bock, C., Gnirke, A. and Meissner, A.
2017 High-throughput biochemical profiling reveals sequence determinants of dCas9 off-target binding and unbinding PNAS Evan A. Boyle, Johan O.L. Andreasson, Lauren M. Chircus, Samuel H. Sternberg, Michelle J. Wu, Chantal K. Guegler, Jennifer A. Doudna, and William J. Greenleaf
2011 High-throughput analysis of the mutagenic and cytotoxic properties of DNA lesions by next-generation sequencing Nuc. Acids Res. Yuan, B., Wang, J., Cao, H. et al
2016 High-temperature single-molecule kinetic analysis of thermophilic archaeal MCM helicases Nucleic Acids Res. Schermerhorn, K.M., Tanner, N., Kelman, Z. and Gardner, A.F.
2013 High-Resolution Enzymatic Mapping of Genomic 5-Hydroxymethylcytosine in Mouse Embryonic Stem Cells Cell Rep Sun, Z., Jolyon, T., Borgaro, J.G., Liu, Y., Yu, L., Guan, S., Wang, H., Sun, D., Cheng, X., Zhu, Z., Pradhan, S. and Zheng, Y.
2013 High-resolution enzymatic mapping of genomic 5-hydroxymethylcytosine in mouse embryonic stem cells Cell Rep Sun Z, Terragni J, Borgaro JG, Liu Y, Yu L, Guan S, Wang H, Sun D, Cheng X, Zhu Z, Pradhan S, Zheng Y
2013 High-resolution enzymatic mapping of 5-hydroxymethylcytosine in mouse embryonic stem cells Cell Rep. Sun, Z. et al.
2007 High-Level Heterologous Expression of Bacillus halodurans Putative Xylanase Xyn11A (BH0899) in Kluyveromyces lactis Biosci. Biotechnol. Biochem. Wamalwa, B.M., et al.
2016 High-efficiency generation of induced pluripotent mesenchymal stem cells from human dermal fibroblasts using recombinant proteins. Stem Cell Res Ther. Chen, F., Zhang, G., Yu, L., Feng, Y., Li, X., Zhang, Z., Wang, Y., Sun, D. and Pradhan, S.
2015 High-density interspecific genetic maps of kiwifruit and the identification of sex-specific markers. DNA Res. Zhang Q, Liu C, Liu Y, VanBuren R, Yao X, Zhong C, Huang H.
2015 High-Density Genetic Mapping with Interspecific Hybrids of Two Sea Urchins, Strongylocentrotus nudus and S. intermedius, by RAD Sequencing. PLoS One. Zhou Z, Liu S, Dong Y, Gao S, Chen Z, Jiang J, Yang A, Sun H, Guan X, Jiang B, Wang B.
2011 High sensitivity 4-hydroxymethylcytosine detection in Balb/C brain tissue. J Vis Exp. Davis, T.and Vaisvila, R.
1994 Hhal Methyltransferase Flips its Target Base Out of the DNA Helix. Cell Klimasauskas, S., Kumar, S., Roberts, R.J., and Cheng, X.
2008 HhaI methyltransferase flips its target base out of the DNA helix. Life Illuminated Roberts, R.J.
2006 Heterologous protein production in the yeast Kluyveromyces lactis FEMS Yeast Res. Van Ooyen, A.J.J., Dekker, P., Huang, M., Olsthoorn, M.M.A., Jacobs, D.I., Colussi P.A., and Taron, C.H.
2006 Heterologous protein production in the yeast Kluyveromyces lactis. FEMS Yeast Res. van Ooyen, A.J.J., Dekker, P., Huang, M., Olsthoorn, M.M.A., Jacobs, D.I., Colussi, P.A.and Taron, C.H.
2008 Heterologous expression of Mytilus californianus foot protein three (Mcfp-3) in Kluyveromyces lactis Platko, J.D., et al. Platko, J.D., et al.
2010 Heterologous expression of glucose oxidase in the yeastKluyveromyces marxianus Microb. Cell Fact. Rocha, S.N., et al.
2011 Heterologous expression of a thermophilic esterase in Kluyveromyces yeasts Appl. Microbiol. Biotechnol. Rocha S.N., et al.
2001 Herbicide resistance from a divided EPSPS protein: the split Synechocystis DnaE intein as an in vivo affinity domain. Gene Chen, L., Pradhan, S.and Evans, T.C.Jr.
2015 Hepatic Stellate Cell Transdifferentiation Involves Genome-Wide Remodeling of the DNA Methylation Landscape J Hepatol Page A., Paoli P., Salvador E., White S., French J., Mann J. Epigenetics
2016 Heme acquisition in the parasitic filarial nematode Brugia malayi. FASEB J. Luck AN, Yuan X, Voronin D, Slatko BE, Hamza I, Foster JM.
2016 Heme acquisition in the parasitic filarial nematode Brugia malayi. FASEB J. Luck, A.N., Yuan, X., Voronin, D., Slatko, B.E., Hamza, I. and Foster, J.M.
2002 Helminth genomics: from gene discovery to genome sequencing. Trends Parasitol Foster, J.M.and Johnston, D.A.
2004 Helicase-dependent isothermaol DNA amplification EMBO Rep. Vincent, M., Xu, Y.and Kong, H.
2013 Hedgehog Signaling Regulates MyoD Expression and Activity J Biol Chem Anastassia Voronova Erin Coyne, Ashraf Al Madhoun, Joel V. Fair, Neven Bosiljcic, Catherine St-Louis, Grace Li, Sherry Thurig, Valerie A. Wallace, Nadine Wiper-Bergeron, and Ilona S. Skerjanc
2005 Harnessing Inteins for Protein Purification and Characterization. Nucleic Acids and Molecular Biology Chong, S.and Xu.M.Q.
2013 GoldenBraid 2.0: A Comprehensive DNA Assembly Framework for Plant Synthetic Biology Plant Physiology Alejandro Sarrion-Perdigones, Marta Vazquez-Vilar, Jorge Palací, Bas Castelijns, Javier Forment, Peio Ziarsolo, José Blanca, Antonio Granell, Diego Orzaez Golden Gate Assembly
2008 Glycoengineering of the methylotrophic yeast Hansenula polymorpha for the production of glycoproteins with trimannosyl core N-glycan by blocking core oligosaccharide assembly Biotechnol. J. Oh, D.B., Park, J.S., Kim, M.W., Cheon, S.A., Kim, E.J., Moon, H.Y., Kwon, O., Rhee, S.K., Kang, H.A.
2015 Glycation of vitronectin inhibits VEGF-induced angiogenesis by uncoupling VEGF receptor-2-αvβ3 integrin cross-talk Mol Biol Cell Wang L., Zhang X., Pang N., Xiao L., Li Y., Chen N., Ren M., Deng X., Wu J.
2003 Glucocorticoid Receptor-like Zn(Cys)4 Motifs in Bsl I Restriction Endonuclease. J.Mol.Biol. Vanamee, E.S., Hsieh, P.C., Zhu, Z., Yates, D., Garman, E., Xu, S.Y.and Aggarwal, A.K.
2016 Global repositioning of transcription start sites in a plant-fermenting bacterium. Nat Commun Boutard, M., Ettwiller, L., Cerisy, T., Alberti, A., Labadie, K., Salanoubat, M., Schildkraut, I. and Tolonen, A.C.
2014 Gill bacteria enable a novel digestive strategy in a wood-feeding mollusk Proc Natl Acad Sci. O'Connor, R.M., Fung, J.M., Sharp, K.H., Benner, J.S., McClung, C., Cushing, S., Lamkin, E.R., Fomenkov, A.I., Henrissat, B., Londer, Y.Y., et al.
2014 Genomics of CpG methylation in developing and developed zebrafish G3 (Bethesda) McGaughey DM, Abaan HO, Miller RM, Kropp PA, Brody LC
1999 Genomics and the biology of parasites. BioEssays Johnston, D.A., Blaxter, M.L., Degrave, W.M., Foster, J., Ivens, A.C.and Melville, S.E.
2016 Genomic study of the Ket: a PaleoEskimo-related ethnic group with significant ancient North Eurasian ancestry. Sci Rep. Flegontov, P. et al.
2002 Genomic functional annotation using co-evolution profiles of gene clusters. Genome Biol. Zheng, Y., Roberts, R.J.and Kasif, S.
1987 Genomic Cloning of Recombinant Antigens Detected by Antiserum Against Infective Larvae of Brugia Malayi. Molecular Paradigms for Eradicating Helminthic Parasites Arasu, P., and Perler, F.B.
2015 Genome-Wide Methylation Patterns in Salmonella enterica Subsp. enterica Serovars PLoS One Pirone-Davies, C., Hoffmann, M., Roberts, R.J., Muruvanda, T., Timme, R.E., Strain, E., Luo, Y., Payne, J., Luong, K., Song, Y., Tsai, Y.C., Boitano, M., Clark, T.A., Korlach, J., Evans, P.S., Allard, M.W.
2011 Genome-wide mapping of the sixth base Genome Biol. Diep, D. and Zhang, K.
2012 Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing. Nat Biotechnol. Fang, G., Munera, D., Friedman, D.I., Mandlik, A., Chao, M.C., Banerjee, O., Feng, Z., Losic, B., Mahajan, M.C., Jabado, O.J., Deikus, G., Clark, T.A., Luong, K., Murray, I.A., Davis, B.M., Keren-Paz, A., Chess, A., Roberts, R.J., Korlach, J., Turner, S.W., Kumar, V., Waldor, M.K. and Schadt, E.E.
2010 Genome-wide mapping of alternative splicing in Arabidopsis thaliana Genome Res Filichkin, S.A., Priest, H.D., Given, S.A., et al
2013 Genome-wide hydroxymethylation tested using the HELP-GT assay shows redistribution in cancer Nucleic Acids Research Bhattacharyya, S., Yu, Y., Suzuki, M., Campbell, N., Mazdo, J., Vasanthakumar, A., et al. 5-hmC Detection & Analysis
2008 Genome-wide analysis reveals a cell cycle-dependent mechanism controling centromere propagation J. Cell Biol. Erhardt, S. et al.
2012 Genome Sequence of the Model Hyperthermophilic Archaeon Thermococcus litoralis NS-C J Bacteriol. Gardner, A.F., Kumar, S. and Perler, F.B.
2015 Genome Filtering for New DNA Biomarkers of Loa loa Infection Suitable for Loop-Mediated PLoS One Poole CB, Ettwiller L, Tanner NA, Evans TC Jr., Wanji S,Carlow CK
2013 Genome engineering in Saccharomyces cerevisiae using CRISPR-Cas systems Nucleic Acids Res DiCarlo JE, Norville JE, Mali P, Rios X, Aach J, Church GM Gibson Assembly®
2017 Genome Announce Genome Announce. Fomenkov, A., Akimov, V.N., Vasilyeva, L.V., Andersen, D.T., Vincze, T., Roberts, R.J.
2014 Genome and Metagenome Sequencing: Using the Human Methyl-Binding Domain to Partition Genomic DNA Derived from Plant Tissues. Applications in Plant Sciences Erbay Yigit, David I. Hernandez, Joshua T. Trujillo, Eileen Dimalanta, and C. Donovan Bailey
2016 Genetics: profiling DNA methylation and beyond Nature Methods Marx V. Epigenetics,Restriction Enzymes for Epigenetics
2007 Genetically encoded short peptide tags for orthogonal protein labeling by Sfp and AcpS phosphopantetheinyl transferases ACS Chemical Biology Zhou Z. et al.
2015 Genetically encoded fragment-based discovery of glycopeptide ligands for carbohydrate-binding proteins J Am Chem Soc Ng, S., Lin, E., Kitov, P.I., Tjhung, K.F., Gerlits, O.O., Deng, L., Kasper, B., Sood, A., Paschal, B.M., Zhang, P., Ling, C.C., Klassen, J.S., Noren, C.J., Mahal, L.K., Woods, R.J., Coates, L. and Derda, R.
2006 Genetically Encoded but Nonpolypeptide Prolyl-tRNA Functions in the A Site for SecM-Mediated Ribosomal Stall Mol. Cell. Muto, H., Nakatogawa, H., and Ito, K.
2016 Genetically anchored fluorescent probes for subcellular specific imaging of hydrogen sulfide. Analyst Chen, J., Zhao, M., Jiang, X., Sizovs, A., Wang, M.C., Provost, C.R., Huang, J. and Wang, J.
2009 Genetic identification of nascent peptides that induce ribosome stalling J. Biol. Chem. Tanner, D., Cariello, D., Woolstenhulme, C., Broadbent, M. and Buskirk, A.
2016 Genetic Divergence between Camellia sinensis and Its Wild Relatives Revealed via Genome-Wide SNPs from RAD Sequencing. PLoS One. Yang H, Wei CL, Liu HW, Wu JL, Li ZG, Zhang L, Jian JB, Li YY, Tai YL, Zhang J, Zhang ZZ, Jiang CJ, Xia T, Wan XC.
1988 Genetic dissection of the methylcytosine-specific restriction system mcrB of Escherichia coli K-12. Gene Dila, D., and Raleigh, E.A.
1990 Genetic and sequence organization of the mcrBC locus of Escherichia coli K-12. J.Bacteriol. Dila, D., Sutherland, E., Moran, L., Slatko, B., and Raleigh, E.A.
1989 Genetic and physical mapping of the mcrA (rglA) and mcrB (rglB) loci of Escherichia coli K-12. Genetics Raleigh, E.A., Trimarchi, R., and Revel, H.
1999 Genetic Analysis of the Base-specific Contacts of BamHI Restriction Endonuclease. J.Mol.Biol. Dorner, L.F., Bitinaite, J., Whitaker, R.D.and Schildkraut, I.
1996 Genes expressed in Brugia malayi infective third stage larvae. Mol.Biochem.Parasitol. Blaxter, M.L., Raghavan, N., Ghosh, I., Guiliano, D., Lu, W., Williams, S.A., Slatko, B.and Scott, A.L.
2014 Generation of West Nile virus infectious clones containing amino acid insertions between capsid and capsid anchor Viruses Vandergaast R, Hoover LI, Zheng K, Fredericksen BL Gibson Assembly®
2003 Generation of the R2 subunit of ribonucleotide reductase by intein chemistry: insertion of 3-nitrotyrosine at residue 356 as a probe of the radical initiation process Biochemistry Yee, C.S., et al.
2003 Generation of an affinity column for antibody purification by intein-mediated protein ligation. J.Immunol.Methods Sun, L., Ghosh, I.and Xu, M.Q.
2000 Generation of a dual-labeled fluorescence biosensor for Crk-II phosphorylation using solid-phase expressed protein ligation Chem. Biol Cotton, G.J. and Muir, T.W.
2002 Gene therapy: reality or myth for the global bleeding disorders community? Haemophilia Kelley, K., Verma, I.and Pierce, G.F.
2010 Gene synthesis of the bovine prochymosin gene and high-level expression in Kluyvermyces lactis Sheng Wu Gong Cheng Xue Bao Yuan W, et al.
2013 Gene synthesis by assembly of deoxyuridine-containing oligonucleotides Methods Mol Biol. Vaisvila, R. and Bitinaite, J.
1996 Gene cloning and production of active recombinant Brugia Malayi microfilarial chintinase. Gene Southworth, M.W., Fuhrman, J.A., Robbins, P.W., Beauregard, K., and Perler, F.B.
2014 Gene and protein sequence optimization for high-level production of fully active and aglycosylated lysostaphin in Pichia pastoris Appl Environ Microbiol Zhao H, Blazanovic K, Choi Y, Bailey-Kellogg C, Griswold KE Glycobiology
2008 Gaussia-luciferase as a sensitive reporter gene for monitoring promoter activity in the nucleus of the green algaChlamydomonas reinhardtii Mol. Genet. Genomics. Ruecker, O., Zillner, K., Groebner-Ferreira, R. and Heitzer, M.
2015 GADD45a physically and functionally interacts with TET1Publication Differentiation Kienhöfer S., Musheev M., Stapf U., Helm M., Schomacher L., Niehrs C., Schäfer A. Epigenetics
2014 G-CSF does not influence C2C12 myogenesis despite receptor expression in healthy and dystrophic skeletal muscle Front Physiol Wright CR, Brown EL, Della-Gatta PA, Ward AC, Lynch GS, Russell AP Glycobiology
2000 Fusions to Self-Splicing Inteins for Protein Purification. Methods in Enzymology Xu, M.Q., Paulus, H.and Chong, S.
2007 Fusion of Gaussia luciferase to an engineered anti-carcinoembryonic antigen (CEA) antibody for in vivo optical imaging  Mol. Imaging Biol. Venisnik, K.M., Olafsen, T., Gambhir, S.S. and Wu, A.M
2007 Fusion of Gaussia luciferase to an engineered anti-carcinoembryonic antigen (CEA) antibody for in vivo optical imaging Mol. Imaging Biol. Venisnik, K.M., Olafsen, T., Gambhir, S.S., Wu, A.M.
2014 Fusion of catalytically inactive Cas9 to FokI nuclease improves the specificity of genome modification Nat Biotechnol Guilinger JP, Thompson DB, Liu DR Gibson Assembly®
2010 Fura-2FF-based calcium indicator for protein labeling Org. Biomol. Chem. Ruggiu A. A. et al.
2009 Functional interactions between Mldp (LSDP5) and Abhd5 in the control of intracellular lipid accumulation. Biol. Chem Granneman, J.G., Moore, H.P., Mottillo, E.P. and Zhu, Z.
2009 Functional interactions between Mldp (LSDP5) and Abhd5 in the control of intracellular lipid accumulation Biol. Chem. Granneman, J.G., Moore, H.P., Mottillo, E.P. and Zhu, Z.J.
2012 Functional importance of Dicer protein in the adaptive cellular response to hypoxia J. Biol. Chem. Ho, J.J., et al.
2012 Functional importance of Dicer protein in the adaptive cellular response to hypoxia J biol Chem. Ho, J.J., Metcalf, J.L., Yan, M.S., Turgeon, P.J., Wang, J.J., chalsev, M., Petruzziello-Pellegrini, T.N., Tsui, A.K., He, J.Z., Dhamko, H., Man, H.S., Robb, G.B., Teh, B.,T., Ohh, M. and Marsden, P.A.
2010 Functional Immobilization and Patterning of Proteins by an Enzymatic Transfer Reaction Anal. Chem. Waichman S. et al.
2007 Functional cooperation between HP1 and DNMT1 mediates gene silencing. Genes & Devel. Smallwood, A., Esteve, P.O., Pradhan, S.and Carey, M.
2010 Functional characterization of the YmcB and YqeV tRNA methylthiotransferases of Bacillus subtilis. Nucl.Acids.Res. Anton, B.P., Russell, S.P., Vertrees, J., Kasif, S., Raleigh, E.A., Limbach, P.A.and Roberts, R.J.
2015 Functional Characterization of Cucurbitadienol Synthase and Triterpene Glycosyltransferase Involved in Biosynthesis of Mogrosides from Siraitia grosvenorii. Plant Cell Physiol Longhai Dai, Can Liu, Yueming Zhu, Jiangsheng Zhang, Yan Men, Zeng Yan, Yuanxia Sun High-Fidelity PCR
2014 Functional characterization improves associations between rare non-synonymous variants in CHRNB4 and smoking behavior PLoS One Haller G, Li P, Esch C, Hsu S, Goate AM, Steinbach JH Glycobiology
2017 Functional characterisation of cis-regulatory elements governing dynamic Eomes expression Development Simon, C.S. et al.
2005 Functional analysis of the N- and C-terminus of mammalian G9a histone H3 methyltransferase. Nucl.Acids Res. Esteve, P.O., Patnaik, D., Chin, H.G., Benner, J., Teitell, M.A.and Pradhan, S.
2000 Functional analysis of putative restriction-modification system genes in the Helicobacter pylori J99 genome. Nucl.Acids Res. Kong, H., Lin, L.F., Porter, N., Stickel, S.Byrd, D., Posfai, J.and Roberts R.J.
2015 Functional analysis of microRNA activity in Brugia malayi Int J Parasitol Liu, C., Voronin, D., Poole, C.B., Bachu, S., Rogers, M.B., Jin, J., Ghedin, E., Lustigman, S., McReynolds, L.A. and Unnasch, T.R.
2002 Functional analysis of iceA1, a CATG-recognizing restriction endonuclease gene in Helicobacter pylori. Nucl.Acids Res. Xu, Q., Morgan, R.D., Roberts, R.J., Xu, S.Y., van Doorn, L.J., Donahue, J.P., Miller, G.G.and Blaser, M.J.
1995 Functional analysis of Gln-237 mutants of HhaI methyltransferase. Nucl.Acids Res. Mi, S., Alonso, D., and Roberts, R.J.
2013 Fully assembled genome sequence for Salmonella enterica subsp. Enterica Serovar Javiana CFSAN001992.  Genome Announcements Allard, M.W. Muruvanda, T., Strain, E., Timme, R., Luo, Y., Wang, C., Keys, C.E., Payne, J., Cooper, T. Luong, K., Song, Y., Chin, C.-S., Korlach, J., Roberts, R.J., Evans, P., Musser, S.M., Brown, E.W.
2010 FRT-Seq: amplification-free, strand-specific transciptome sequencing Nature Methods Mamanova, L., Andrews, R.M., James, K.D., Sheridan, E.M., Ellis, P.D., Langford, C.F., Ost, T.W., Collins, J.E. and Turner, D.J.
2006 FRET imaging reveals that functional neurokinin-1 receptors are monomeric and reside in membrane microdomains of live cells Proc. Natl. Acad. Sci. USA Meyer B.H. et al.
2010 Frequent mutations of chromatin remodeling gene ARID1A in ovarian clear cell carcinoma Science  Jones, S., Wang, T.-L., Shih, Ie-M., et al
2016 Folate-/FAD-dependent tRNA methyltransferase from Thermus thermophilus regulates other modifications in tRNA at low temperatures. Genes Cells Yamagami, R., Tomikawa, C., Shigi, N., Kazayama, A., Asai, S.I., Takuma, H., Hirata, A., Fourmy, D., Asahara, H., Watanabe, K., Yoshizawa, S. and Hori, H.
1998 FokI Dimerization is Required for DNA Cleavage. Proc.Natl.Acad.Sci.USA Bitinaite, J., Wah, D.A., Aggarwal, A.K., Schildkraut, I.
2006 Fluorophores for live cell imaging of AGT fusion proteins across the visible spectrum BioTechniques Keppler A. et al.
2011 Fluorescent site-specific labeling of Escherichia coli expressed proteins with Sfp phosphopantetheinyl transferase Methods Mol.Biol. Zhang, A., Sun, L., Buswell, J., Considine, N., Ghosh, I., Masharina, A., Noren, C.and Xu, M.Q.
2011 Fluorescent peptides highlight peripheral nerves during surgery in mice Nat. Biotechnol. Whitney, M.A. et al.
2010 Fluorescent labeling of COS-7 expressing SNAP-tag fusion proteins for live cell imaging J.Vis Exp Provost, C.R. and Sun, L.
2006 Fluorescence-mediated analysis of mitochondrial preprotein import in vitro Anal. Biochem.  Krayl M. et al.
2009 Fluorescence in living systems: applications in chemical biology Wiley Encyc. of Chem. Biol. Cornish, V. W.
2004 First sequenced genome of a parasitic nematode. Trends Parasitol. Ghedin, E., Wang, S., Foster, J.and Slatko, B.
1990 Filarial paramyosin: cDNA sequences from Dirofilaria immitis and Onchocerca volvulus. Mol.Biochem.Parasitol. Limberger, R.J., and McReynolds, L.A.
1991 Filarial DNA probes in Jakarta. Parasitol.Today McReynolds, L.A., Poole, C.B., and Williams, S.A.
2012 Filarial and Wolbachia genomics. Parasite Immunol. Scott, A.L., Ghedin, E., Nutman, T.B., McReynolds, L.A., Poole, C.B., Slatko, B.E.and Foster, J.M.(
2012 Filarial and Wolbachia Genomics Parasite Immunol. Scott, A.L., Ghedin, E., Nutman, T.B., McReynolds, L.A., Poole, C.B., Slatko, B.E. and Foster, J.M.
1990 Field testing of monoclonal probe specific for infective larvae of human Brugian parasites. Parasites: Molecular Biology, Drug and Vaccine Design Carlow, C.K.S., Suwita, A., Bahang, Z., Purnomo, Partono, F., and Philipp, M.
2013 Fidelity index determination of DNA methyltransferase PLoS One Borgaro, J.G., Benner, N., Zhu, Z.
1994 Fibroblast growth factor and cyclic AMP (cAMP) synergistically active gene expression at a cAMP response element. Mol.Cell.Biol. Tan, Y., Low, K.G., Boccia, C., Grossman, J., and Comb, M.J.
1996 FGF and stress regulate CREB and ATF-1 via a pathway involving p38 MAP kinase and MAPKAP kinase-2. EMBO J. Tan, Y., Rouse, J., Zhang, A., Cariati, S., Cohen, P., and Comb, M.J.
2007 Feedback inhibition of calcineurin and Ras by a dual inhibitory protein Carabin. Nature Pan, F., Sun, L., Kardian, D., Whartenby, K., Pardoll, D.and Liu, J.O.
2013 Faster Protein Splicing with the Nostoc punctiforme DnaE Intein Using Non-native Extein Residues J Biol Chem Cheriyan, M., Pedamallu, C.S., Tori, K. and Perler, F.
2013 Fast mitochondrial DNA isolation from mammalian cells for next-generation sequencing Biotechniques Wilber Quispe-Tintaya, Ryan R White, Vasily N Popov, Jan Vijg, Alexander Y Maslov
1995 Extremozymes: expanding the limits of biocatalysis. Biotechnology Adams, M.W.W., Perler, F.B.and Kelly, R.M.
2013 Extensively duplicated and transcriptionally active recent lateral gene transfer from a bacterial Wolbachia endosymbiont to its host filarial nematode Brugia malayi BMC Genomics Ionnidis, P., Johnston, K.L., Riley, D.R., Kumar, N., White, J.R., Olarte, K.T., Ott, S., Tallon, L.J., Foster, J.M., Taylor, M.J. and Dunning-Hotopp, J.C.
2010 Expression, purification, phosphorylation and characterization of recombinant human statherin Protein Expr Purif. Manconi, B., et. al.
1994 Expression, purification, and crystallization of restriction endonuclease PvuII with DNA containing its recognition site Proteins Balendiran, K., Bonventre, J., Knott, R., Jack, W., Benner, J., Schildkraut, I., and Anderson, J.E.
2002 Expression of the class 1 outer-membrane protein of Neisseria meningitidis in Escherichia coli and purification using a self-cleavable affinity tag Protein Expr. Purif.  Humphries, H. E., Christodoulides, M. and Heckels, J. E.
2005 Expression of SMAP-29 cathelicidin-like peptide in bacterial cells by intein-mediated system Protein Expr. Purif. Morassutti, C., et al.
2011 Expression of recombinant cytochromes c in E.coli. Methods Mol.Biol. Londer, Y.Y.
2006 Expression of N-terminal Cys-protein fragments using an intein refolding strategy Bioorg. Med. Chem. Hackenberger, C. P., et. al.
2011 Expression of heparin sulfate sulfotransferases in Kluyveromyces lactisand preparation of PAPS Glycobiology Advance Access Zhou, X., et al.
1994 Expression of an Onchocerca volvulus Ov33 homolog in Dirofilaria immitis: potential in immunodiagnosis of heartworm infection. Parasite Immunol. Mejia, S.J., Knenfou, C., Southworth, M.W., Perler, F.B.and Carlow, C.K.
2008 Expression of a cytotoxic cationic antibacterial peptide in Escherichia coli using two fusion partners Protein Exp. Purif. Chen, Y. Q., et. al.
2016 Expression and purification of the modification-dependent restriction enzyme BisI and its homologous enzymes Sci Rep Xu, S.Y., Klein, P., Degtyarev, S.K.h. and Roberts, R.J.
2015 Expression and purification of single-chain Type IV restriction enzyme Eco94GmrSD and determination of it substrate preference Scientific Reports He, X., Hull, V., Thomas, J.A., Fu, X., Gidwani, S., Gupta, Y.K., Black, L.W. and Xu, S-Y.
2000 Expression and purification of recombinant proteins by fusion to maltose-binding protein. Mol.Biotechnol. Riggs, P.
2008 Expression and purification of BmrI restriction endonucleases and its N-terminal cleavage domain variants Bao, Y., Higgins, Zhang, P., Chan, S.H., Lagaet, S., Sweeney, S., Lunnen, K., Xu, S.Y.
2007 Expression and purification of BmrI restriction endonuclease and its N-terminal cleavage domain variants. Protein Expr.Purif. Bao, Y., Higgins, L., Zhang, P., Chan, S-H., Laget, S., Sweeney, S., Lunnen, K.and Xu, S-Y.
2004 Expression and function of conserved nuclear receptor genes in Caenorhabditis elegans. Dev.Biol. Gissendanner, C.R., Crossgrove, K., Kraus, K.A., Maina, C.V.and Sluder, A.E.
2007 Expressed protein ligation using an N-terminal cysteine containing fragment generated in vivo from a pelB fusion protein Protein Expr. Purif. Hauser, P. S., et al.
2010 Expressed protein ligation for the preparation of fusion proteins with cell penetrating peptides for endotoxin removal and intracellular delivery Biochim Biophys Acta Yu, H. H., et. al.
2005 Explosive Lineage-Specific Expansion of the Orphan Nuclear Receptor HNF4 in Nematodes. J Mol Evol. Robinson-Rechavi, M, Maina, C.V., Gissendanner, C.R., Laudet, V., Sluder, A.
2015 Expanding the MDx toolbox for filarial diagnosis and surveillance Trends Parasitol. Alhassan, A., Li, Z., Poole, C.B. and Carlow, C.K.S.
2011 Expanding the genetic code of Escherichia coli with Phosphoserine Science Park, H.S., Hohn, M.J., Umehara, T., Guo. L.T., Osborne, E.M., Benner, J., Noren, C.J., Rinehart, J. and Soll, D.
2011 Expanding the definition of class 3 inteins and their proposed phage origin. J.Bacteriol. Tori, K.and Perler, F.B.
2009 Expanding the chemical Biologist's tool kit: chemical labelling strategies and its applications Curr. Med. Chem.  Chattopadhaya S. et al.
2014 Expanded genetic codes in next generation sequencing enable decontamination and mitochondrial enrichment PLoS One McKernan KJ, Spangler J, Zhang L, Tadigotla V, McLaughlin S, Warner J, Zare A, Boles RG
2011 Exonucleases Curr.Protoc.Mol.Biol. McReynolds, L.A.and Nichols, N.M.
2017 Examining Sources of Error in PCR by Single-Molecule Sequencing. PLoS ONE Potapov Vladamir, Ong Jennifer L
2006 Evolving the substrate specificity of O6 alkylguanine DNA alkyltransferase through loop insertion for applications in molecular imaging ACS Chem Biol. Heinis C. et al.
2002 Evolutionary relationship of Alw261, Eco31I and Esp3I, restriction endonucleases that recognise overlapping sequences Mol. Genet. Genomics Bitinaite, J., Mitkaite, G., Dauksaite, V., Jakubauskas, A., Timinskas, A., Vaisvila, R., Lubys, A., Janulaitis, A.
1998 Evolutionary evidence for recombination among bacteria in nature.E.coli. Horizontal Gene Transfer Milkman, R., Cryderman, D., McKane, M., McWeeny, K.and Raleigh E.A.
2010 Evolutionary divergence in the fungal response to fluconazole revealed by soft clustering Gen. Bio.  Kuo, D., et al.
2015 Evolutionary and biogeographical patterns of barnacles from deep-sea hydrothermal vents. Mol Ecol. Herrera S, Watanabe H, Shank TM.
2014 Evolution, mechanisms, and applications of intein-mediated protein splicing J Biol Chem Perler FB, Allewell NM
2015 Evolution of stickleback in 50 years on earthquake-uplifted islands. Proc Natl Acad Sci U S A Lescak EA, Bassham SL, Catchen J, Gelmond O, Sherbick ML, von Hippel FA, Cresko WA.
2010 Evolution of Bacterial Phosphoglycerate Mutases: Non-homologous Isofunctional Enzymes Undergoing Gene Losses, Gains and Lateral Transfers. PLoS ONE Foster, J.M., Davis, P.J., Raverdy, S., Sibley, M.H., Raleigh, E.A., Kumar, S.and Carlow, C.K.S.
2006 Evidence supporting a cisi-enedio-based mechanism for Pyrococcus furiousus phophoglucose isomerase. J Mol Biol. Berrisford, J.M., Hounslow, A.M., Akerboom, J., Hagen, W.R., Brouns, S.J., van der Oost, J., Murray, I.A., Michael Blackburn, G., Waltho, J.P., Rice, D.W.and Baker, P.J.
2013 Evaluation of UDP-GlcN Derivatives for Selective Labeling of 5-(Hydroxymethyl)cytosine Chembiochem Dai N, Bitinaite J, Chin HG, Pradhan S, Corrêa IR Jr.
2006 Evaluation of two novel tag-based labeling technologies for site-specific modification of proteins Int. J. Biol. Macromol. Tirat A. et al.
1998 Evaluation of the ASSURE/FH Antibody Assay for the Detection of Feline Heartworm Infection. Proc.Amer.Heartworm Symp. Bestul, K.J., McCall, J.W., Supakorndej, N., Ma, D., Carlow, C.K.S.
2014 Evaluation of fluorophores to label SNAP-tag fused proteins for multicolor single-molecule tracking microscopy in live cells Bosch PJ, Corrêa IR Jr, Sonntag MH, Ibach J, Brunsveld L, Kanger JS, Subramaniam V
2016 Evaluation of a glycoengineered monoclonal antibody via LC-MS analysis in combination with multiple enzymatic digestion MAbs Liu, R., Giddens, J., McClung, C.M., Magnelli, P.E., Wang, L.X., Guthrie, E.P.
2015 Evaluation of a glycoengineered monoclonal antibody via LC-MS analysis in combination with multiple enzymatic digestion MAbs Liu R, Giddens J, McClung CM, Magnelli PE, Wang LX, Guthrie EP.
2017 Evaluating computatonal gene ontology annotations Methods Mol. Biol. Skunca, N., Roberts, R.J., Steffen, M.
2014 Establishment of a CpG island microarray for analyses of genome-wide DNA methylation in Chinese hamster ovary cells Appl Microbiol Biotechnol Wippermann A, Klausing S, Rupp O, Albaum SP, Büntemeyer H, Noll T, Hoffrogge R
1986 Escherichia coli K-12 restricts DNA containing 5-methylcytosine. Proc.Natl.Acad.Sci.USA Raleigh, E.A., and Wilson, G.
2016 Erratum to: SHuffle, a novel Escherichia coli protein expression strain capable of correctly folding disulfide bonded proteins in its cytoplasm. Microb Cell Fact. Lobstein, J., Emrich, C.A., Jeans, C., Faulkner, M., Riggs, P. and Berkmen, M.
2014 Epigenetic silencing of apoptosis-inducing gene expression can be efficiently overcome by combined SAHA and TRAIL treatment in uterine sarcoma cells PLoS One Fröhlich LF, Mrakovcic M, Smole C, Lahiri P, Zatloukal K
2008 Epigenetic mechanisms in mammals. Cell Mol.Life Sci. Kim JK, Samaranayake M, Pradhan S.
2009 Epigenetic mechanisms in mammals Cell Mol Life Sci Kim, J.K., Samaranayake, M., Pradhan, S
2016 Epidemiological typing of Neisseria gonorrhoeae and detection of markers associated with antimicrobial resistance directly from urine samples using next generation sequencing Sex. Transm. Infect Graham, R.M.A. et al.
2008 Enzyme catalyzed site-specific protein labeling and cell imaging with quantum dots Chem. Comm. Sunbul M. et al.
1996 Enzymatic C5-Cytosine Methylation Of DNA - Mechanistic Implications Of New Crystal-Structures For HhaI Methyltransferase-DNA-Adohcy Complexes. J.Mol.Biol. O'Gara, M., Klimasauskas, S., Roberts, R., and Cheng, X.D.
2015 Environmental marine pathogen isolation using mesocosm culture of sharpsnout seabream: striking genomic and morphological features of novel Endozoicomonas sp. Sci Rep. Katharios, P. et al.
1987 Enhancement of the apparent cleavage specificities of restriction endonucleases: applications to megabase mapping of chromosomes. McClelland, M., and Nelson, M.
2015 Enhanced production of secretory glycoprotein VSTM1-v2 with mouse IgGκ signal peptide in optimized HEK293F transient transfection Sci Rep Liu H., Zou X., Li T., Wang X., Yuan W., Chen Y., Han W.
2014 Enhanced gene disruption by programmable nucleases delivered by a minicircle vector. Gene Ther A-Bk Dad, S Ramakrishna, M Song, H Kim Genome Editing
2005 Engineering substrate specificity of O6-alkylguanine-DNA alkyltransferase for specific protein labeling in living cells ChemBioChem Juillerat A. et al.
2004 Engineering Strand-specific DNA Nicking Enzymes fro the Type IIS Restriction Endonucleases BsaI, BsmBI and BsmAI. J.Mol.Biol. Zhu, Z., Samuelson, J.C., Zhou, J., Dore, A.and Xu, S.-Y.
2007 Engineering of the yeast Yarrowia lipolytica for the production of glycoproteins lacking the outer-chain mannose residues of N-glycans Appl. Environ. Microbiol.  Song, Y., Choi, M.H., Park, J.N., Kim, M.W., Kim, E.J., Kang, H.A., Kim, J.Y.
2010 Engineering of a synthetic electron conduit in living cells Proc. Natl. Acad. Sci. USA Jensen, H.M., et al.
2010 Engineering Nt.BtsCI and Nb.BtsCI nicking enzymes and applications in generating long overhangs. Nucl.Acids.Res. Too, P.H., Zhu, Z., Chan, S.H.and Xu, S.Y.
2014 Engineering nicking enzymes that preferentially nick 5-methylcytosine-modified DNA Nucleic Acids Res Gutjahr A, Xu SY Gibson Assembly®
2014 Engineering hydrogen gas production from formate in a hyperthermophile by heterologous production of an 18-subunit membrane-bound complex J Biol Chem Lipscomb GL, Schut GJ, Thorgersen MP, Nixon WJ, Kelly RM, Adams MW Gibson Assembly®
2012 Engineering Escherichia coli for soluble expression and single step purification of active human lysozyme Journal of Biotechnology Lamppa, J.W., Tanyos, S.A., and Griswold, K.E.
2009 Engineering BspQI nicking enzymes and application of N.BspQI in DNA labeling and production of single-strand DNA. Protein Expr.Purif. Zhang, P., Too, P.H., Samuelson, J.C., Chan, S.H., Vincze, T., Doucette, S., Backstrom, S., Potamousis, K.D., Schramm, T.M., Forrest, D., Schwartz, D.C.and Xu, S.Y.
2010 Engineering BspQI nicking enzymes and application of N.BspQI in DNA labeling and production of single-strand DNA Protein Exp Purif Zhang, P., Too, P.H., Samuelson, J.C., Chan, S.H., Vincze, T., Doucete, S., Backstrom, S., Potamousis, K.D., Schramm, T.M., Forrest, D., Schwartz, D.C., Xu, S.Y.
2011 Engineering BL21(DE3) derivative strains to minimize Escherichia coli protein contamination after IMAC purification. Appl. Environ. Microbiol. Robichon, C., Luo, J., Causey, T.B., Benner, J.S. and Samuelson, J.C.
2011 Engineering BL21(DE3) derivative strains to minimize Escherichia coli protein contamination after IMAC purification. Appl.Environ.Microbiol. Robichon, C., Luo, J., Causey, T.B., Benner, J.S.and Samuelson, J.C.
2014 Engineering Bacterial Transcription Regulation To Create a Synthetic in Vitro Two-Hybrid System for Protein Interaction Assays J Am Chem Soc Zhou Y, Asahara H, Schneider N, Dranchak P, Inglese J, Chong S
2011 Engineering a waste management enzyme to overcome cancer resistance to apoptosis: adding DNase1 to the anti-cancer toolbox Cancer Gene Ther. Rosner, K., Kasprzak, M.F., Horenstein, A.C., Thurston, H.L., Abrams, J., Kerwin, L.Y., Mehregan, D.A. and Mehregan, D.R.
2006 Engineering a rare-cutting restriction enzyme: genetic screening and selection of NotI variants. NAR Samuelson, J.C., Morgan, R.D., Benner, J.S., Claus, T.E., Packard, S.L.and Xu, S.Y.
2001 Engineering a Nicking Endonuclease N.AlwI by Domain Swapping Proc.Natl.Acad.Sci.USA Xu, Y., Lunnen, K.and Kong, H.
2012 Engineered derivatives of maltose-binding protein Protein Engineering Riggs, P.D.
2008 Endothelial nitric oxide synthase gene expression during murine embryogenesis: commencement of expression in the embryo occurs with the establishment of a unidirectional circulatory system. Circ Res. Teichert, A.M., Scott, J.A., Robb, G.B., Zhou, Y.Q., Zhu, S.N., Lem, M., Keightley, A., Steer, B.M., Schuh, A.C., Adamson, S.L., Cybulsky, M.I.and Marsden, P.A.
2010 Endosymbiont DNA in endobacteria-free filarial nematodes indicates ancient horizontal genetic transfer. PLoS ONE McNulty, S.N., Foster, J.M., Mitreva, M., Dunning-Hotopp, J.C., Martin, J., Fischer, K., Wu, B., Davis, P.J., Kumar, S., Brattig, N.W., Slatko, B.E., Weil, G.J.and Fischer, P.U.
2002 Endosomal localization and function of sorting Proc. Natl. Acad. Sci. USA Zhong, Q., et al.
2011 Endonucleases Curr Protoc Mol Biol Nichols, N.M.
2006 Enabling Glycosyltransferase Evolution: A Facile Substrate-Attachment Strategy for Phage-Display Enzyme Evolution. Chembiochem. Love K.R., Swoboda J.G., Noren C.J.and Walker, S.
2016 Emerging pathogens of gilthead seabream: characterisation and genomic analysis of novel intracellular β-proteobacteria. ISME J. Seth-Smith, M.B.P. et al.
2014 Elimination of inter-domain interactions increases the cleavage fidelity of the restriction endonuclease DraIII Protein Cell Zhuo W, Lai X, Zhang L, Chan SH, Li F, Zhu Z, Yang M, Sun D
2002 Efficient isolation of targeted Caenorhabditis elegans deletion strains using highly thermostable restriction endonucleases and PCR. Nucl.Acids.Res. Wei, A., Yuan, A., Fawcett, G., Butler, A., Davis, T., Xu, S.Y.and Salkoff, L.
2008 Efficient interval partitioning approach for global optimization. Journal of Global Optimization Pedamallu, C.S., Ozdamar, L., Csendes, T.and Vinko, T.
2011 Efficient in vivo selection of a novel tumor-associated peptide from a phage display Molecules Veleva, A.N. et al.
2016 Efficient In Situ Detection of mRNAs using the Chlorella virus DNA ligase for Padlock Probe Ligation RNA Schneider, N and Meier, M.
2013 Efficient genome editing in Caenorhabditis elegans by CRISPR-targeted homologous recombination Nucleic Acids Res Chen C, Fenk LA, de Bono M Gibson Assembly®
2015 Efficient expression of full-length antibodies in the cytoplasm of engineered bacteria Nature Communications Robinson, M.-P., Ke, N., Lobstein, J., Peterson, C., Szkodny, A., Mansell, T.J., Tuckey, C., Riggs, P.D., Colussi, P.A., Noren, C.J., Taron, C.H., Delisa, M.P., Berkmen, M.
2015 Efficient expression of full-length antibodies in the cytoplasm of engineered bacteria Nat Commun. Robinson MP, Ke N, Lobstein J, Peterson C, Szkodny A, Mansell TJ, Tuckey C, Riggs PD, Colussi PA, Noren CJ, Taron CH, DeLisa MP, Berkmen M.
2014 Efficient DNA ligation in DNA–RNA hybrid helices by Chlorella virus DNA ligase Nucleic Acids Research Gregory J. S. Lohman, Yinhua Zhang, Alexander M. Zhelkovsky, Eric J. Cantor, Thomas C. Evans Jr.
Efficient DNA ligation in DNA-RNA hybrid helices by Chlorella
2013 Efficient and specific gene knockdown by small interfering RNAs produced in bacteria Nat Biotechnol. Huang, L., Jin, J., Deighan, P., Liner, E., McReynolds, L. and Lieberman, J.
2012 Efficient and sequence-independent replication of DNA containing a third base pair establishes a functional six-letter genetic alphabet. Proc. Natl. Acad. Sci. USA Malyshev, D.A., Dhami, K., Quach, H.T., Lavergne, T., Ordoukhanian, P., Torkamani, A. and Romesberg, F.E.
2009 Effect of temperature-shift strategy on recombinat chymosin of Kluyveromyces Lactis Heilongjiang Animal Science and Veterinary Medicine Feng, Z., et al
1999 Effect of CWG methylation on expression of plant genes. Biochem J. Pradhan, S., Urwin, N.A., Jenkins, G.I.and Adams, R.L.
2009 Educational Outreach - Give Students a Taste for Molecular Biology and Tasting PTC: A New Lab with an Old Flavor. BioTechniques Weiner, M.P.and Slatko, B.(eds.)
2009 Educational Outreach - Discover the Microbes Within! BioTechniques Weiner, M.P.and Slatko, B.(eds.)
2009 EcR-B1 and Usp nuclear hormone receptors regulate expression of the VM32E eggshell gene during Drosophila  oogenesis. Dev.Biol. Bernardi, F., Romani, P., Tzertzinis, G., Gargiulo, G.and Cavaliere V.
2017 EcoBLMcrX, a classical modification-dependent restriction enzyme in Escherichia coli B: Characterization in vivo and in vitro with a new approach to cleavage site determination PLoS One Fomenkov, A., Sun, Z., Dila, D.K., Anton, B.P., Roberts, R.J., Raleigh, E.A.
1988 EarI, a restriction endonuclease from Enterobacter aerogenes which recognizes 5'CTCTTC3'. Nucl.Acids Res. Polisson, C., and Morgan, R.D.
2009 E.coli RNase III(E38A) generates discrete-sized products from long dsRNA. RNA Xiao, J., Feehery, C.E., Tzertzinis, G.and Maina, C.V.
2017 Dynamics of 5-carboxylcytosine during hepatic differentiation: potential general role for active demethylation by DNA repair in lineage specification Lewis, L.C., Lo, P.C., Foster, J.M., Dai, N., Correa, I.R., Jr., Durczak, P.M., Duncan, G., Ramsawhook, A., Aithal, G.P., Denning, C., Hannan, N.R., Ruzov, A.
2011 Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiation Nature Ficz, G., et al.
2007 Dynamic developmental elaboration of N-linked glycan complexity in the Drosophila melanogaster embryo J. Biol. Chem. Aoki, K., Perlman, M., Lim, J.M., Cantu, R., Wells, L., Tiemeyer, M.
2015 Dynamic caveolae exclude bulk membrane proteins and are required for sorting of excess glycosphingolipids Nat Commun Elena Shvets, Vassilis Bitsikas, Gillian Howard, Carsten Gram Hansen, Benjamin J Nichols SNAP Surface
2007 Dual-reporter assay using two secreted luciferase genes Biotechniques Wu, C., Suzuki-Ogoh, C., Ohmiya, Y.
2007 Dual-reporter assay using two secreted luciferase genes  Biotechniques Wu, C., Suzuki-Ogoh, C. and Ohmiya, Y.
2004 Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with Chromomethylase3. EMBO J. Lindroth, A.M., Shultis, D., Jasencakova, Z., Fuchs, J., Johnson, L., Scubert, D., Patnaik, D., Pradhan, S., Goodrich, J., Schubert, Il, Jenuwein, T., Khorasanizadeh, S.and Jacobsen, S.E
2012 Dual binding of Chromomethylase Domains to H3K9me2-Containing Nucleosomes Directs DNA Methylation in Plants. Cell Xuehua Zhong, X., Du, J., Bernatavichute, Y.V., Stroud, H., Feng, S., Caro, E., Vashisht, A.A., Chin, H.G., Terragni, J., Tu, A., Hetzel, J., Wohlschlegel, J.A., Pradhan, S., Patel, D.J. and Jacobsen, S.E.
2012 Drugs and targets to perturb the symbiosis of Wolbachia and filarial nematodes Parasitic Helminths: Targets, Screens, Drugs and Vaccines Taylor, M.J., Ford, L, Ford, Hoerauf, A., Pfarr, K., Foster, J.M., Kumar, S. and Slatko, B.E.
1998 Drosophila Hormone Receptor 38 Functions in Metamorphosis: A Role in Adult Cuticle Formation. Genetics Kozlova, T., Pokholkova, G.V., Tzertzinis, G., Sutherland, J.D., Zhimulev, I.F.and Kafatos, F.C.
1989 DrdI, a unique restriction endonuclease from Deinococcus radiodurans which recognizes 5'GACN6GTC3'. Nucl.Acids Res. Polisson, C., and Morgan, R.D.
2007 Draft Genome of the Filarial Parasite Brugia malayi. Science Ghedin E, Wang S, Spiro D, Caler E, Zhao Q, Crabtree J, Allen JE, Delcher AL, Guiliano DB, Miranda-Saavedra D, Angiuoli SV, Creasy T, Amedeo P, Haas B, El-Sayed NM, Wortman JR, Feldblyum T, Tallon L, Schatz M, Shumway M, Koo H, Salzberg SL, Schobel S, Pertea M, Pop M, White O, Barton GJ, Carlow CK, Crawford MJ, Daub J, Dimmic MW, Estes CF, Foster JM, Ganatra M, Gregory WF, Johnson NM, Jin J, Komuniecki R, Korf I, Kumar S, Laney S, Li BW, Li W, Lindblom TH, Lustigman S, Ma D, Maina CV, Martin DM, McCarter JP, McReynolds L, Mitreva M, Nutman TB, Parkinson J, Peregrín-Alvarez JM, Poole C, Ren Q, Saunders L, Sluder AE, Smith K, Stanke M, Unnasch TR, Ware J, Wei AD, Weil G, Williams DJ, Zhang Y, Williams SA, Fraser-Liggett C, Slatko B, Blaxter ML, Scott AL.
1998 Does Bcg1, a Unique Restriction Endonuclease, Require Two Recognition Sites for Cleavage? J Biol.Chem Kong, H., and Smith, C.L.
2011 Docking-dependent ubiquitination of the interferon regulatory factor-1 tumor suppressor protein by the ubiquitin ligase CHIP J. Biol. Chem. Narayan, V., Pion, E., Landré, V., Müller, P. and Ball, K.L.
2013 DNMT1-interacting RNAs block gene-specific DNA methylation Nature Annalisa Di Ruscio, Alexander K. Ebralidze, Touati Benoukraf, Giovanni Amabile, Loyal A. Goff, Jolyon Terragni, Maria Eugenia Figueroa, Lorena Lobo De Figueiredo Pontes, Meritxell Alberich-Jorda, Konstantin K. Ebralidze, Sriharsa Pradhan, John L. Rinn, Daniel G. Tenen
2017 DNA target recognition domains in the Type I restriction and modification systems of Staphylococcus aureus Nucl. Acids Res. Cooper, L.P., Roberts, G.A., White, J.H., Luyten, Y.A., Bower, E.K., Morgan, R.D., Roberts, R.J., Lindsay, J.A., Dryden, D.T.
1994 DNA sequencing Curr.Protoc.Mol.Biol. Slatko, B., Heinrich, P., Nixon, B.T., Eckert, R.L., Albright, L., and Ausubel, F.
2008 DNA Repair Enzymes. Curr.Protoc.Mol.Biol. Evans, T.C., Jr.and Nichols, N.M.
2017 DNA recognition by the SwaI restriction endonuclease involves unusual distortion of an 8 base pair A:T-rich target Nucl. Acids Res. Shen, B.W., Heiter, D.F., Lunnen, K.D., Wilson, G.G., Stoddard, B.L.
2016 DNA recognition by the SwaI restriction endonuclease involves unusual distortion of an 8 base pair A: T-rich target. Nucleic Acids Res. Shen, B.W., Heiter, D.F., Lunnen, K.D., Wilson, G.G. and Stoddard, B.L.
2015 DNA polymerases in biotechnology Front Microbiol. Gardner, A.F. and Kelman, Z.
2014 DNA polymerases in biotechnology Front Microbiol. Gardner, A.F. and Kelman, Z.
2006 DNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion. Nucl.Acids.Res. Horton, J.R., Zhang, X., Maunus, R., Yang, Z., Wilson, G.G., Roberts, R.J.and Cheng, X.
1984 DNA modification methylases: New uses in the manipulation of DNA. BioTechniques Christ, C., and Nelson, M.
2011 DNA Ligases Curr Protoc Mol Biol Lohman, G.J., Tabor, S., Nichols, N.M.
2008 DNA distortion and specificity in a sequence-specific endonuclease. J.Mol.Biol. Babic, A.C., Little, E.J., Manohar, V.M., Bitinaite, J., Horton, N.C.
2006 DNA Damage-induced Down-regulation of Human Cdc25C and Cdc2 is Mediated by Cooperation between p53 and Maintenance DNA (Cytosine 5) Methyltransferase 1. J Biol Chem. Le Gac, G., Esteve, P., Ferec, C.and Pradhan, S.
2017 DNA damage is a pervasive cause of sequencing errors, directly confounding variant identification Science Chen, L., Liu, P., Evans, T.C., Jr., Ettwiller, L.M.
2008 DNA damage in preserved specimens and tissue samples: a molecular assessment. Frontiers in Zoology Zimmermann, J., Hajibabaei, M., Blackburn, D.C., Hanken, J., Cantin, E., Posfai, J.and Evans, T.C.
1997 DNA containing 4'-thio-2' deoxycytidine inhibits methylation by HhaI methyltransferase. Nucl.Acids Res. Kumar, S., Horton, J.R., Jones, G.D., Walker, R.T., Roberts, R.J., and Cheng, X.
2009 DNA Cloning and Engineering by Uracil Excision. Curr.Protoc.Mol.Biol. Bitinaite, J.and Nichols, N.M.
2002 DNA Binding and Recognition by the IIs Restriction Endonuclease MboII. J.Biol.Chem. Soundararajan, M., Chang, Z., Morgan, R.D., Heslop, P.and Connolly, B.A.
2003 DNA -repair protein hHR23a alters its protein structure upon binding proteasomal subunit S5a Proc. Natl. Acad. Sci. USA Walters, K.J., et al.
2005 DNA -binding activity of LndI protein and temporal expression of the gene that upregulates landomycin E production in Streptomyces globisporus 1912 Microbiology Rebets, Y., et al.
2014 Diversity and Expression of MicroRNAs in the Filarial Parasite, Brugia malayi. PLoS One Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA.
2007 Diversifying selection and host adaptation in two endosymbiont genomes. BMC Evolutionary Biology Brownlie, J.C., Adamski, M., Slatko, B.and McGraw, E.A.
2012 Disulfide-bonded protein expression in E. coli Genetic Engineering & Biotechnology News Samuelson, J.C., Causey, T.B., and Berkmen, M.
2016 Distributive processing by the Iron(II)/α-Ketogluterate-dependent catalytic domains of the TET enzymes in consistent with epigenetic roles for oxidized 5-methylcytosine bases J Am Chem Soc. Tamanaha, E., Guan, S., Marks, K., Saleh, L.
2007 Distribution plasticity of the human estrogen receptor alpha in live cells: distinct imaging of consecutively expressed receptors J. Mol. Biol. Pick H. et al.
2015 Dissecting the molecular properties of prokaryotic flotillins PLoS One Juri Nio Bach, Marc Bramkamp SNAP Cell,SNAP Surface
2000 Dissecting the Chemistry of Protein Splicing and its Applications Angew.Chem.Int.Ed. Noren, C.J., Wang, J.and Perler, F.B.
1995 Disruption of the target G-C base-pair by the HhaI methyltransferase. Gene Klimasauskas, S., and Roberts, R.J.
2008 Disruption of the OCH1 and MNN1 genes decrease N-glycosylation on glycoprotein expressed inKluyveromyces lactis J. Biotechnol.  Liu, B., Gong, X., Chang, S., Yang, Y., Song, M., Duan, D., Wang, L., Ma, Q., and Wu, J.
2011 Disruption of PMR1 in Kluyveromyces lactis improves secretion of calf prochymosin J. Sci. Food Agric. Feng, Z., et al.
2010 Discrimination of Methylcytosine from Hydroxymethylcytosinein DNA Molecular. J Am Chem Soc Wanunu, M., Cohen-Karni, D., Johnson, R.R., Fields, L., Benner, J., Peterman, N., Zheng, Y., Klein, M.L., Drndic, M.
2010 Discrimination of methylcytosine from hydroxymethylcytosine in DNA molecular J. Am. Chem. Soc. Wanunu, M. et al.
2007 Discovery of natural nicking endonucleases Nb.BsrDI and Nb.BtsI and engineering of top-strand nicking variants from BsrDI and BtsI. Nucl.Acids.Res. Xu, S.Y.,  Zhu, Z., Zhang, P., Chan, S.H., Samuelson, J., Xiao, J., Ingalls D.and Wilson, G.
1998 Discovery and Uses of Novel Glycosidases Techniques in Glycobiology Wong-Madden, S.T., Landry, D., and Guthrie, E.P.
1997 Discovery and Uses of Novel Glycosidases Techniques in Glycobiology Wong-Madden, S.T., Landry, D., and Guthrie, E.P. Glycobiology
2001 Discovery and distribution of super-integrons among pseudomonads. Mol.Microbiol. Vaisvila, R., Morgan, R.D., Posfai, J.and Raleigh, E.A.
1987 Dirofilaria immitis: Genomic Complexity and Characterication of a Structural Gene. Molecular Paradigms for Eradicating Helminthic Parasites Maina, C.V., Grandea, A.G.I., Le, T.K.T., Nur, A., Williams, S.A., and McReynolds, L.A.
2002 Dirofilaria immitis encodes Di-nhr-7, a putative orthologue of the Drosophila ecdysone-regulated E78 gene. Mol.Biochem.Parasitol. Crossgrove, K., Laudet, V.and Maina, C.V.
2002 Directed Evolution of Restriction Endonuclease BstYI to Achieve Increased Substrate Specificity. J.Mol.Biol. Samuelson, J.C.and Xu, S.Y.
2003 Directed evolution of O6-alkylguanine-DNA alkyltransferase for efficient labeling of fusion proteins with small molecules in vivo Chem. Biol.  Juillerat A. et al.
2006 Directed evolution of O6-alkylguanine-DNA alkyltransferase for applications in protein labeling Prot. Eng. Des. Sel. Gronemeyer T. et al.
2008 Direct site-selective covalent protein immobilization catalyzed by a phosphopantetheinyl transferase J. Am. Chem. Soc. Wong L. S. et al.
1994 Direct selection of binding proficient/catalytic deficient variants of BamHI endonuclease. Nucl.Acids.Res. Dorner, L.F., and Schildkraut, I.
2009 Direct observation of the nanoscale dynamics of membrane lipids in a living cell Nature Eggeling C. et al.
2006 Direct interaction between DNMT1 and G9a coordinates DNA and histone methylation during replication. Genes & Devel. Esteve, P.O., Chin, H.G., Smallwood, A., Feehery, G.R., Gangisette, O., Karpf, A.R., Carey, M.F.and Pradhan, S.
2013 Digital droplet PCR for rapid quantification of donor DNA in the circulation of transplant recipients as a potential universal biomarker of graft injury. Clin. Chem. Beck J, Bierau S, Balzer S, Andag R, Kanzow P, Schmitz J, Gaedcke J, Moerer O, Slotta JE, Walson P, Kollmar O, Oellerich M, Schütz E.
2008 Diffusion and directed movement: in vitro motile properties of fission yeast kinesin-14 Plk1 J. Biol. Chem.  Fururta, K. et al.
1995 Differential recognition of microfilarial chitinase, a transmission-blocking vaccine candidate antigen, by sera from patients with Brigian and Bancroftian filariasis. Am.J.Trop.Med.Hyg. Dissanayake, S., Perler, F.B., Xu, M., Southworth, M.W., Yee, C.K., Wang, S., Dreyer, G., Watawana, L., Kurniawan, L., Fuhrman, J.A., and Piessens, W.F.
2015 Differential connectivity of splicing activators and repressors to the human spliceosome Genome Biol. Akerman, M., Fregoso, Ol., Das, S., Ruse, C., Jensen, M.A., Pappin, D.J., Zhang, M.Q., Krainer, A.R.
2012 Diagnosis of brugian filariasis by loop-mediated isothermal amplification. PLoS Negl Trop Dis. Poole CB, Zhang Y, Evans TC Jr., Carlow CK
2012 Diagnosis of Brugian Filariasis by Loop-Mediated Isothermal Amplification PLOS Negl Trop Dis Poole, C., Tanner, N. Zhang, Y., Evans, T. and Carlow, C.
2014 DevR (DosR) mimetic peptides impair transcriptional regulation and survival of Mycobacterium tuberculosis under hypoxia by inhibiting the autokinase activity of DevS sensor kinase BMC Microbiol Kaur K, Taneja NK, Dhingra S, Tyagi JS Phage Display
2015 Developmental exposure to 2,3,7,8-tetrachlorodibenzo-p-dioxin alters DNA methyltransferase (dnmt) expression in zebrafish (Danio rerio) Toxicol Appl Pharmacol Aluru N, Kuo E, Helfrich LW, Karchner SI, Linney EA, Pais JE, Franks DG
2014 Development of VHH Antibodies against Dengue Virus Type 2 NS1 and Comparison with Monoclonal Antibodies for Use in Immunological Diagnosis PLoS One Fatima A, Wang H, Kang K, Xia L, Wang Y, Ye W, Wang J, Wang X. Phage Display
2010 Development of SNAP-tag-mediated live cell labeling as an alternative to GFP in Porphyromonas gingivalis FEMS Immunol. Med. Microbiol.  Nicolle O. et al.
2011 Development of SNAP-Tag Fluorogenic Probes for Wash-Free Fluorescence Imaging. Chembiochem. Sun, X., Zhang, A., Baker, B., Sun, L., Howard, A., Buswell, J., Maurel, D., Masharina, A., Johnsson, K., Noren, C.J., Xu, M-Q and Corrêa, I.R., Jr.
2016 Development of a universal and simplified ddRAD library preparation approach for SNP discovery and genotyping in angiosperm plants. Plant Methods. Yang GQ, Chen YM, Wang JP, Guo C, Zhao L, Wang XY, Guo Y, Li L, Li DZ, Guo ZH.
2015 Development of a Rapid, Simple Method for Detecting Naegleria fowleri Visually in Water Samples by Loop-Mediated Isothermal Amplification (LAMP). PLoS One Aongart Mahittikorn, Hirotake Mori, Supaluk Popruk, Amonrattana Roobthaisong, Chantira Sutthikornchai, Khuanchai Koompapong, Sukhontha Siri, Yaowalark Sukthana, Duangporn Nacapunchai Isothermal Amplification
2016 Development of a RAD-Seq Based DNA Polymorphism Identification Software, AgroMarker Finder, and Its Application in Rice Marker-Assisted Breeding. PLoS One. Fan W, Zong J, Luo Z, Chen M, Zhao X, Zhang D, Qi Y, Yuan Z.
2002 Development of a Positive Genetic Selection System for Inhibition of Protein Splicing Using Mycobacterial Inteins in Escherichia coli DNA Gyrase Subunit A. J.Mol.Micro.Biotechnol. Adam, E.and Perler, F.B.
2005 Development of a minimal cell-free translation system for the synthesis of presecretory and integral membrance proteins Biotechnol, Prog. Kuruma, Y., Nishiyama, K., Shimizu, Y., Muller, M and Ueda, T.
2008 Development of a dual-luciferase reporter system for in vivo visualization of MicroRNA biogenesis and posttranscriptional regulation Nucl. Med. Lee, J.Y., Kim, S., Hwang do, W., Jeong, J.M., Chung, J.K., Lee, M.C. and Lee, D.S.J.
2008 Development of a dual-luciferase reporter system for in vivo visualization of MicroRNA biogenesis and posttranscriptional regulation Nucl. Med. Lee, J.Y., Kim, S., Hwang do, W., Jeong, J.M.,Chung, J.K., Lee, M.C., Lee, D.S.J.
2009 Development of a dual luciferase TrAC Trends in Analytical Chemistry Roda, A., Guardigli, M., Michelini, E. and Mirasoli, M.
2001 Determination of Wolbachia Genome Size by Pulsed-Field Gel Electrophoresis. J.Bacteriol. Sun, L.V., Foster, J.M., Tzertzinis, G., Ono, M., Bandi, C., Slatko, B.E.and O'Neill, S.L.
2007 Determination of silencing potency of synthetic and RNase Ill-generated siRNA using a secreted luciferase assay. Biotechniques Morlighem, J.E., Petit, C and Tzertzinis, G.
2007 Determination of silencing potency of synthetic and RNase III-generated siRNA using a secreted luciferase assay. BioTechniques Morlighem, J-E., Petit, C.and Tzertzinis, G.
2007 Determination of silencing potency of synthetic and RNase III-generated siRNA using a secreted luciferase assay Biotechniques Morlighem, J.E., Petit, C. and Tzertzinis, G.
1998 Determination of Certain Agarose-Immobilized Ligands by Use of Perchloric Acid. Biochromatography Wilkie, S.D.and Landry, D.
1999 Determinants of nucleotide sugar recognition in an archaeon DNA polymerase. Nuc.Acids Res. Gardner, A.F.and Jack, W.E.
2001 Detection of Serum IgG Antibodies Specific for Wolbachia Surface Protein in Rhesus Monkeys Infected with Brugia malayi. J Infectious Diseases Punkosdy, G.A., Dennis, V.A., Lasater, B.L., Tzertzinis, G.foster, J.M.and Lammie, P.J.
2012 Detection of miRNAs with a nanopore single-molecule counter Expert Rev Mol Diagn. Gu, L.Q., Wanunu, M., Wang, M.X., McReynolds, L. and Wang, Y.
2012 Detection of miRNAs with a nanopore single-molecule counter Expert Rev. Mol. Diagn. Gu, L.Q., et al.
1997 Detection of Loa loa-specific DNA in Blood from Occult-Infected Individuals. Exp.Parasitol. Toure, F.S., Bain, O., Nerrienet, E., Millet, P., Wahl, G., Toure, Y., Doumbo, O., Nicolas, L., Georges, A.L., McReynolds, L.A., and Egwang, T.G.
2009 Detection of ligand-induced CNTF receptor dimers in living cells by fluorescence cross correlation spectroscopy Biochim. Biophys. Acta.  Neugart F. et al.
1997 Detection and Isolation of Recombinant Protein Based on Binding Affinity Reporter Methods Mol.Biol. Riggs, P.
2016 Detecting DNA Methylation using the Oxford Nanopore Technologies MinION sequencer bioRxiv Simpson, J.T. et al.
2010 Designed semisynthetic protein inhibitors of ub/ubl e1 activating enzymes J. Am. Chem. Soc. Lu, X., et al.
2007 Design, preparation and use of ligated phosphoproteins: A novel approach to study protein phosphatases by dot blot array, ELISA and Western blot assays Methods Sun, L., et al.
2010 Design of a potent D-peptide HIV-1 entry inhibitor with a strong barrier to resistance J. Virol. Welch, B.D. et al.
2007 Design and Use of Ligated Phophoproteins: Study of Protein Phosphatases by Dot Blot Array, ELISA and Western Blot Analysis. Methods Sun, L., Ghosh, I., Barshevsky, T., Kochinyanm, S.and Xu, M.
2016 Derivative Engineered To Be Deficient in All Methylcytosine and Methyladenine Restriction Systems. Genome Announc. Jobling, M.G., Raleigh, E.A. and Frank, D.N.
2015 Depletion of CG-Specific Methylation in Mycoplasma hyorhinis Genomic DNA after Host Cell Invasion PLoS One Chernov AV., Reyes L., Peterson S., Strongin AY. Epigenetics,Bisulfite Conversion
1998 Dependence of McrBC Cleavage on Distance Between Recognition Elements. Biol.Chem. Stewart, F.J.and Raleigh, E.A.
2016 Denys-Drash syndrome associated WT1 glutamine 369 mutants have altered sequence-preferences and altered responses to epigenetic modifications. Nucleic Acids Res. Hashimoto, H., Zhang, X., Zheng, Y., Wilson, G.G. and Cheng, X.
2006 Deglycosylation of the beta1-subunit of the BK channel changes its biophysical properties Am. J. Physiol.Cell. Physiol.  Hagen, B.M., Sanders, K.M.
2017 Defining the RNaseH2 enzyme-initiated ribonucleotide excision repair pathway in Archaea J. Biol Chem. Heider, M.R., Burkhart, B.W., Santangelo, T.J., Gardner, A.F.
2004 Deficiencies in the essential Smp3 mannosyltransferase block glycosylphosphatidylinositol assembly and lead to defects in growth and cell wall biogenesis in Candida albicans. Microbiology Grimme, S.J., Colussi, P.A., Taron,C.H.and Orlean, P.
1999 Deep within the Filarial Genome: Progress of the Filarial Genome Project. Parasitology Today The Filarial Genome Project
2013 Decreased vancomycin susceptibility in Staphylococcus aureus caused by IS256 tempering of WalKR expression Antimicrob Agents Chemother McEvoy CR, Tsuji B, Gao W, Seemann T, Porter JL, Doig K, Ngo D, Howden BP, Stinear TP
2011 Decoding a Substantial Set of Samples in Parallel by Massive Sequencing PLoS ONE  Neiman, M., Lundin, S., Savolainen, P., Ahmadian, A.
2016 De novo SNP discovery and genetic linkage mapping in poplar using restriction site associated DNA and whole-genome sequencing technologies. BMC Genomics Mousavi M, Tong C, Liu F, Tao S, Wu J, Li H, Shi J.
2017 De novo assembly of genomes from long sequence reads reveals uncharted territories of Propionibacterium freudenreichii BMC Genomics Deptula, P., Laine, P.K., Roberts, R.J., Smolander, O.-P., Vihinen, H., Piironen, V., Paulin, L., Jokitalo, E., Savijoki, K., Auvinen, P., Varmanen, P.
Database of DNA polymerases Curr Protoc Mol Biol. Langhorst, B.W. and Nichols, N.M.
2010 D-peptide inhibitors of the p53-MDM2 interaction for targeted molecular therapy of malignant neoplasms Proc. Natl. Acad. Sci. Liu, M. et al.
2003 Cytosine methylation by the SuaI restriction-modification system: implications for genetic fidelity in a hyperthermophilic archaeon. J.Bacteriol. Grogan, D.W.
2011 Cyclophosphamide Perturbs Cytosine Methylation in Jurkat-T Cells through LSD1-Mediated Stabilization of DNMT1 Protein. Chem.Res.Toxicol. Zhang, J., Yuan, B., Zhang, F., Xiong, L., Pradhan, S.and Wang, Y.
2011 Cyclophosphamide perturbs cytosine methylation in jurkat-T Cells through LSD1-mediated stabilization of DNMT1 Protein Chem. Res. Toxicol. Zhang, J. et al.
2008 CXXC domain of human DNMT1 is essential for enzymatic activity. Biochemistry Pradhan, M., Estève, P.O., Chin, H.G., Samaranayke, M., Kim, G.D.and Pradhan, S.
2016 Culture-independent genomic characterisation of Candidatus Chlamydia sanzinia, a novel uncultivated bacterium infecting snakes. BMC Genomics Taylor-Brown, A. et al.
Culture-independent genomic characterisation of Candidatus Chlamydia
2002 Crystallographic study of a naturally occurring trans-splicing intein from Synechocystis sp.PCC 6803. Acta Crystallogr.D.Biol.Crystallogr. Chen, X., Xu, M.-Q., Ding, Y., Ferrandon, S.and Rao, Z.
2003 Crystallization of restriction endonuclease SfiI in complex with DNA Acta Crystallogr. D Biol. Crystallogr. Viadiu, H., Vanamee, E.S., Jacobson, E.M., Schildkraut, I. and Aggarawl, A.K.
2000 Crystallization of Restriction Endonuclease BamHI with Nonspecific DNA. J.Struct.Biol. Viadiu, H., Kucera, R., Schildkraut, I.and Aggarwal, A.K.
2000 Crystallization and preliminary X-ray diffraction analysis of MspI restriction endonuclease in complex with its cognate DNA. Acta Crystallogr.D.Biol.Crystallogr. O'Loughlin, T.J., Xu, Q., Kucera, R.B., Dorner, L.F., Sweeney, S., Schildkraut, I.and Guo, H.-C.
1997 Crystallization and Preliminary X-ray Analysis of Restriction Endonuclease FokI Bound to DNA. FEBS Lett. Hirsch, J.A., Wah, D.A., Dorner, L.F., Schildkraut, I., Aggarwal, A.K.
1994 Crystallization and Preliminary X-ray Analysis of Restriction Endonuclease BamHI-DNA Complex. J.Mol.Biol. Strzelecka, T., Newman, M., Dorner, L.F., Knott, R., Schildkraut, I., and Aggarwal, A.K.
1999 Crystallization and preliminary diffractin analysis of the HincII restriction endonuclease-DNA complex. Acta Crystallogr.D.Biol.Crystallogr. Horton, N.C, Dorner, L.F., Schildkraut, I.and Perona J.J.
1994 Crystallization and Preliminary Crystallographic Analysis of Two Endo-b-N-acetylglucosaminidases, Endo H and Endo F1. J.Mol.Biol. Van Roey, P., Silva, G.H., Rao, V., Plummer, J., T.H., Tarention, A.L., and Guan, C.
2011 Crystallization and preliminary crystallographic analysis of the Type IIL restriction enzyme MmeI in complex with DNA. Acta Crystallogr.F.Structural biology and crystallization communications Callahan, S.J., Morgan, R.D., Jain, R., Townson, S.A., Wilson, G.,G.Roberts, R.J.and Aggarwal, A.K.
1998 Crystal Structures of Flavobacterium Glycosylasparaginase. J.Biol.Chem. Guo, H.-C., Xu, Q., Buckley, D.and Guan, C.
2005 Crystal structures of an intein from the split dnaE gene of Synechocystis sp.PCC6803 reveal the catalytic model of intein without the penultimate histidine and the mechanism of zinc ion inhibition of protein splicing. J.Mol.Biol. Ping, S., Ye, S., Ferrandon, S., Evans, T.C., Xu, M-Q.and Rao, Z.
2005 Crystal structure of the restriction-modification system control element C.BclI and mapping of its binding site. Structure Sawaya, M.R., Zhu, Z., Fana, M., Chan, S.H., Dabur, R., Xu, S.Y.and Balendiran, G.K.
1995 Crystal structure of the PvuII restriction endonuclease. Gene Cheng, X., Balendiran, K., Schildkraut, I., and Anderson, J.E.
1993 Crystal Structure of the HhaI DNA Methyltransferase. Cheng, X., Kumar, S., Klimasauskas, S., and Roberts, R.J.
1993 Crystal structure of the HhaI DNA methyltransferase complexed with S-adenosyl-L-methionine. Cell Cheng, X., Kumar, S., Posfai, J., Pflugrath, J.W., and Roberts, R.J.
1998 Crystal Structure of the Cyclophilin-like Domain from the Parasitic Nematode Brugia Malayi. Protein Sci. Mikol, V., Ma, D., Carlow, C.K.S.
2000 Crystal Structure of the Complex of Brugia Malayi Cyclophilin and Cyclosporin A. Protein Sci. Ellis, P.J., Carlow, C.K.S., Ma, D.and Kuhn, P.
1998 Crystal Structure of the Complex of Brugia Malayi Cyclophilin and Cyclosporin A. Biochemistry Ellis, P.J., Carlow, C.K.S., Ma, D.and Kuhn, P.
1998 Crystal Structure of Restriction Endonuclease BgII Bound to its Interrupted DNA Recognition Sequence. EMBO J. Newman, M., Lunnen, K., Wilson, G., Greci, J., Schildkraut, I., Phillips, S.E.
1995 Crystal structure of endo-beta-N-acetylglucosaminidase H at 1.9 A resolution: active-site geometry and substrate recognition. Structure Rao, V., Guan, C., and Van Roey, P.
2004 Crystal Structure of BstYI at 1.85 Angstrom Resolution: A Thermophilic Restriction Endonuclease with Overlapping Specificities to BamHI and BglII. J.Molec.Biol. Townson, S.A., Samuelson, J.C., Vanamee, E.S., Edwards, T.A., Escalante, C.R., Xu, S.-Y.and Aggarwal, A.K.
2001 Crystal structure of a phosphorylated Smad2. Recognition of phosphoserine by the MH2 domain and insights on Smad function in TGF-beta signaling Mol Cell. Wu, J.W., et al.
2003 Crystal structure of a mini-intein reveals a conserved catalytic module involved in side chain cyclization of asparagine during protein splicing. J.Biol.Chem. Ding, Y., Xu, M.-Q., Ghosh, I., Chen, X., Ferrandon, S., Lesage, G., Rao, Z.
2008 Crucial role of aspartic acid at position 265 in the CH2 domain for murine IgG2a and IgG2b Fc-associated effector functions J Immunol. Baudino L, Shinohara Y, Nimmerjahn F, Furukawa J, Nakata M, Martínez-Soria E, Petry F, Ravetch JV, Nishimura S, Izui S.
1991 Cross-linking of a monoclonal antibody-antigen complex enables detection of parasite antigen in immunoblots and in an expression library. Mol.Biochem.Parasitol. Awobuluyi, M., Mania, C.V., and Carlow, C.K.S.
2015 CRL4RBBP7 is required for efficient CENP-A deposition at centromeres J Cell Sci Julien Mouysset, Samuel Gilberto, Michelle G Meier, Fabienne Lampert, Mukta Belwal, Patrick Meraldi, Matthias Peter SNAP Cell
2015 CRISPR/Cas9 nuclease cleavage combined with Gibson assembly for seamless cloning Biotechniques Wang JW, Wang A, Li K, Wang B, Jin S, Reiser M, Lockey RF
2002 Creation of an Artificial Bifunctional Intein by Grafting a Homing Endonuclease into a Mini-intein. J.Mol.Biol. Hall, M.F., Noren, C., Perler, F.and Schildkraut, I.
2010 Covalent quantum dot receptor linkage via the acyl carrier protein for single-molecule tracking, internalization, and trafficking studies BioTechniques Zelman-Femiak, M. et al.
2003 Covalent labeling of fusion proteins with chemical probes in living cells Chimia Gendreizig S. et al.
2006 Covalent labeling of cell-surface proteins for in vivo FRET studies FEBS Letters Meyer B.H. et al.
2005 Covalent immobilization of recombinant fusion proteins with hAGT for single molecule force spectroscopy Eur. Biophys. J Kufer S.K. et al.
2003 Covalent and selective immobilization of fusion proteins JACS Kindermann M. et al.
2010 Coordination sphere of the third metal site is essential to the activity and metal selectivity of alkaline phosphatases. Protein Sci. Koutsioulis, D., Lyskowski, A.Maki, S., Guthrie, E., Feller, G., Bouriotis, V.and Heikinheimo, P.
2001 Converting MlyI endonuclease into a nicking enzyme by changing its oligomerization state. EMBO Reports Besnier, C.E.and Kong, H.
2015 Converting a Sulfenic Acid Reductase into a Disulfide Bond Isomerase Antioxid Redox Signal Chatelle C, Kraemer S, Ren G, Chmura H, Marechal N, Boyd D, Roggemans C, Ke N, Riggs P, Bardwell J, Berkmen M
2015 Converting a Sulfenic Acid Reductase into a Disulfide Bond Isomerase Antioxid Redox Signal. Chatelle C, Kraemer S, Ren G, Chmura H, Marechal N, Boyd D, Roggemans C, Ke N, Riggs P, Bardwell J, Berkmen M.
2010 Controlled expression of functional miR-122 with a ligand inducible expression system. BMC Biotechnology Shea, C.and Tzertzinis, G.
2015 Contrasting genetic structure between mitochondrial and nuclear markers in the dengue fever mosquito from Rio de Janeiro: implications for vector control. Evol Appl. Rašić G, Schama R, Powell R, Maciel-de Freitas R, Endersby-Harshman NM, Filipović I, Sylvestre G, Máspero RC, Hoffmann AA.
1994 Construction of pSC101 derivatives with Camr and Tetr for selection or LacZ' for blue/white screening. BioTechniques Xu, S.Y., and Fomenkov, A.
2008 Construction of intein mediated hGMCSF expression vector and its prufication in Pichia pastoris Protein Exp. Purif. Babu, S.K., et. al.
2016 Construction of High-Density Linkage Maps of Populus deltoides × P. simonii Using Restriction-Site Associated DNA Sequencing. PLoS One. Tong C, Li H, Wang Y, Li X, Ou J, Wang D, Xu H, Ma C, Lang X, Liu G, Zhang B, Shi J.
2001 Construction of high-complexity combinatorial phage display peptide libraries. Methods Noren, K.A.and Noren, C.J.
2004 Construction of BAC libraries from the parasitic nematode Brugia malayi and physical mapping of the genome of its Wolbachia endosymbiont. Int.J.Parasitol. Foster, J.M., Kumar, S., Ganatra, M.B., Kamal, I.H., Ware, J., Ingram, J., Pope-Chappell, J., Guiliano, D., Whitton, C., Daub, J., Blaxter, M.L.and Slatko, B.E.
2001 Construction of a mini-intein fusion system to allow both direct monitoring of soluble protein expression and rapid purification of target proteins. Gene Zhang, A., Gonzales, S.M., Cantor, E.J.and Chong, S.
2000 Construction and use of pIII-displayed peptide libraries Phage Display: A Laboratory Manual Noren, K.A., Saltman, L.H.and Noren, C.J.
1997 Construction and characterization of a radio-iodinatable mutant of recombinant human CD4. J.Immunol.Methods Ferrer, M., Godbout, K., Sullivan, B., Austen, D., Sanderson, C., Kelley, K., Osburne, M., Harrison, S.and van Schravendijk, M.R.
2010 Constitutive secretion in Tetrahymena thermophila. Eukaryot Cell Madinger, C.L., collins, K., Fields, L.G., Taron, C.H.and Benner, J.S.
2015 Considerations and protocols for the synthesis of custom protein labeling probes Metholds Mol Biol Correa, I.R. Jr.
2010 Conservation and divergence of methylation patterning in plants and animals Proc. Natl. Acad. Sci. USA Feng, S., Cokusb, S.J., Zhang, X. et al
2014 Consequences of the disease-related L78R mutation for dimerization and activity of STAT3 J Cell Sci Domoszlai T, Martincuks A, Fahrenkamp D, Schmitz-Van de Leur H, Küster A, Müller-Newen G Cellular Analysis,SNAP Cell
2013 Conjugation Brenner's Encyclopedia of Genetics Raleigh, E.A. and Low, K.B.
2014 Concurrent transcriptional profiling of Dirofilaria immitis and its Wolbachia endosymbiont throughout the nematode life cycle reveals coordinated gene expression BMC Genomics Luck, A.N., Evans, C.C., Foster, J.M., et al.
2009 Computational Prediction of Essential Genes in an Unculturable Endosymbiotic Bacterium, Wolbachia of Brugia malayi. BMC Microbiol. Holman, A.G., Davis, P.J., Foster, J.M., Carlow, C.K.S.and Kumar, S.
2002 Computational Identification of Operons in Microbial Genomes. Genome Res. Zheng, Y., Szustakowski, J.D., Fortnow, L., Roberts, R.J.and Kasif, S.
2016 Comprehensive Profiling of Glycosphingolipid Glycans Using a Novel Broad Specificity Endoglycoceramidase in a High-Throughput Workflow. Albrecht, S., Vainauskas, S., Stöckmann, H., McManus, C., Taron, C.H. and Rudd, P.M.
2016 Comprehensive nucelosome mapping of the human genome in cancer progression Oncotarget Druliner, B.R., Vera, D., Johnson, R., Ruan, X., Apone, L.M., Dimalanta, E.T., Stewart, F.J., Boardman, L., Dennis, J.H.
2009 Comprehensive mapping of long range interactions reveals folding principles of the human genome Science Lieberman-Aiden E., van Berkum N., Williams L., Imakaev M., Ragoczy T., Telling A., Amit I., Lajoie B., Sabo P., Dorschner M., Sandstrom R., Bernstein B., BenderM. A., Groudine M., Gnirke A., Stamatoyannopoulos J., Mirny L., Lander E., Dekker J. Epigenetics
2008 Comprehensive Analysis of the Effects of Eschericia coli ORF's on Protein Translation Reaction Molecular & Cellular Proteomics Kazuta, Y., Adachi, J., Matsuura, T., Ono, N., Mori, H. and Yomo T.
2015 Compounds targeting disulfide bond forming enzyme DsbB of Gram-negative bacteria Nature Chemical Biology Landeta, C., Blazyk, J.L., Hatahet, F., Meehan, B.M., Eser, M., Myrick, A., Bronstain, L., Minami, S., Arnold, H., Ke, N., Rubin, E.J., Furie, B.C., Furie, B., Beckwith, J., Dutton, R., Boyd, D.
2015 Complete Genome Sequence of the freshwater colorless sulfur bacterium Beggiatoa leptomitiformis neotype strain D-402T Genome Announc. Fomenkov, A., Vincze, T., Grabovich, M.Y., Dubinina, G., Orlova, M., Belousova, E., Roberts, R.J.
2016 Complete Genome Sequence of the Engineered Escherichia coli SHuffle Strains and Their Wild-Type Parents Genome Announc. Anton, B.P., Fomenkov, A., Raleigh, E.A. and Berkmen, M.
2015 Complete Genome Sequence of Streptomyces sp. strain CCM_MD2014, isolated from topsoil in Woods Hole, Massachusetts Genome Announc. Mariita, R.M., Bhatnagar, S., Hanselmann, K., Hossain, M.J., Korlach, J., Boitano, M., Roberts, R.J., Liles, M.R., Moss, A.G., Leadbetter, J.R., Newman, D.K., Dawson, S.C.
2015 Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Agona 460004 2-1, Associated with a Multistate Outbreak in the United States Genome Announc Hoffmann M, Payne J, Roberts RJ, Allard MW, Brown EW, Pettengill JB
2016 Complete Genome Sequence of NEB 5-alpha, a Derivative of Escherichia coli K-12 DH5 alpha. Genome Announc. Anton, B.P. and Raleigh, E.A.
2016 Complete Genome Sequence of Escherichia coli ER1821R, a Laboratory K-12 Derivative Engineered To Be Deficient in All Methylcytosine and Methyladenine Restriction Systems Genome Announc. Jobling, M.G., Raleigh, E.A. and Frank, D.N.
2015 Complete Genome Sequence of ER2796, a DNA Methyltransferase-Deficient Strain of Escherichia coli K-12 PLoS One Anton, B.P., Mongodin, E.F., Agrawal, S., Fomenkov, A., Byrd, D.R., Roberts, R.J. and Raleigh, E.A.
2015 Complete Genome Sequence of Enteroinvasive Escherichia coli O96:H19 Associated with a Severe Foodborne Outbreak Genome Announc Pettengill EA, Hoffmann M, Binet R, Roberts RJ, Payne J, Allard M, Michelacci V, Minelli F, Morabito S.
2015 Complete Genome Sequence of Curtobacterium sp. strain MR_MD2014, isolated from topsoil in Woods Hole, Massachusetts Genome Announc. Mariita, R.M., Bhatnagar, S., Hanselmann, K., Hossain, M.J., Korlach, J., Boitano, M., Roberts, R.J., Liles, M.R., Moss, A.G., Leadbetter, J.R., Newman, D.K., Dawson, S.C.
2016 Complete genome sequence of Brevibacterium linens SMQ-1335. Genome Announcements De Melo, A., Labrie, S., Dumaresq, J., Roberts, R., Tremblay, D. and Moineau, S.
2016 Complete Genome Sequence of a Strain of Azospirillum thiophilum Isolated from a Sulfide Spring. Genome Announc. Fomenkov, A., Vincze, T., Grabovich, M., Anton, B.P., Dubinina, G., Orlova, M., Belousova, E. and Roberts, R.J.
2013 Complete Genome Sequence of a Multidrug-Resistant Salmonella enterica Serovar Typhimurium var. 5- Strain Isolated from Chicken Breast Genome Announc Hoffmann M, Muruvanda T, Allard MW, Korlach J, Roberts RJ, Timme R, Payne J, McDermott PF, Evans P, Meng J, Brown EW, Zhao S
2014 Complete genome sequence of a multidrug resistant Salmonella enterica serovar Typhimurium var. 5-strain isolated from chicken breast Genome Announc. Hoffmann, M., Muruvanda, T., Allard, M.W., Korlach, J., Roberts, R.J., Timme, R., Payne, J., McDermott, P.F., Evans, P., Meng, J., Brown, E.W., Zhao, S.
2015 Complete genome sequence and methylome analysis of bacillus strain x1 Genome Announc Fomenkov, A., Lunnen, K.D., Zhu, Z., Anton, B.P., Wilson, G.G., Vincze, T. and Roberts, R.J.
2016 Complete Genome Sequence and Methylome Analysis of Aeromonas hydrophila Strain YL17, Isolated from a Compost Pile. Genome Announc. Lim, Y.L., Roberts, R.J., Ee, R., Yin, W.F. and Chan, K.G.
2017 Complete genome sequence and methylome analysis of Acinetobacter calcoaceticus 65 Fomenkov, A., Vincze, T., Degtyarev, S.K., Roberts, R.J.
2015 Complete Genome Sequence Analysis of Bacillus Subtilis T30 Genome Announc. Xu, S-Y., Boitano, M., Clark, T.A., Vincze, T., Fomenkov, A., Kumar, S., Too, PH-M., Gonchar, D., Degtyarev, S.K. and Roberts, R.J.
2016 Complete genome and methylome sequences of two Salmonella Genome Announcements Yao, K., Muruvanda, T., Roberts, R.J., Payne, J., Allard, M.W., Hoffmann, M.
2017 Complete genome and methylome sequences of Salmonella enterica subsp. enterica Serovars Typhimurium, Saintpaul, and Stanleyville from the SARA/SARB collection Genome Announce Yao, K., Roberts, R.J., Allard, M.W., Hoffmann, M.
2016 Complete Genome and Methylome Sequences of Salmonella enterica subsp. enterica Serovar Panama (ATCC 7378) and Salmonella enterica subsp. enterica Serovar Sloterdijk (ATCC 15791). Genome Announc. Yao, K., Muruvanda, T., Roberts, R.J., Payne, J., Allard, M.W. and Hoffmann, M.
2014 Complementation of essential yeast GPI mannosyltransferase mutations suggests a novel specificity for certain Trypanosoma and Plasmodium PigB proteins PLoS One Cortes, L.K., Scarcelli, J.J., Taron, C.H.
1993 Compilation of Commercially Available Nucleases Nucleases Schildkraut, I.
1997 Compilation and analysis of intein sequences. Nuc.Acids Res. Perler, F.B., Olsen, G.J., and Adam, E.
2011 Comparitive characterization of the PvuRts11 family and application in mapping genomic 5-hydroxymethylcytosine Nucl. Acids Res.
2014 Comparison of Subtypes of Listeria monocytogenes Isolates from Naturally Contaminated Watershed Samples with and without a Selective Secondary Enrichment PLoS ONE Gorski L, Walker S, Liang AS, Nguyen KM, Govoni J, et al.
2015 Comparison of loop-mediated isothermal amplification and real-time PCR for detecting Bordetella pertussis. J Med Microbiol Mohammad Reza Allahyar Torkaman, Kazunari Kamachi, Vajihe Sadat Nikbin, Masoumeh Nakhost Lotfi, Fereshteh Shahcheraghi Isothermal Amplification
2016 Comparison of intraspecific, interspecific and intergeneric chloroplast diversity in Cycads. Sci Rep. Jiang, G.F. et al.