Publications

Publications

In addition to using the filters to search, this list may be sorted by clicking on any column header. Titles in orange are linked to the full article text.

Use any combination of the filters and/or perform a keyword(s) search to narrow your results below.

Search Filters
  1. Filter by:
  2. and/or
  3. Clear all filters

Your search returned 1783 results.

Search Results
YearTitleJournalAuthorsApplication(s)
2011Comparitive characterization of the PvuRts11 family and application in mapping genomic 5-hydroxymethylcytosineNucl. Acids Res.
2015Restriction Cascade Exponential Amplification (RCEA) assay with an attomolar detection limit: a novel, highly specific, isothermal alternative to qPCRScientific Reports
Culture-independent genomic characterisation of Candidatus Chlamydia
Efficient DNA ligation in DNA-RNA hybrid helices by Chlorella
2015Label-free single-cell protein quantification using a drop-based mix-and-read system.Sci. Rep.Abbaspourrad A, Zhang H, Tao Y, Cui N, Asahara H, Zhou Y, Yue D, Koehler SA, Ung LW, Heyman J, Ren Y, Ziblat R, Chong S, Weitz DA.
2014Modular assembly of designer PUF proteins for specific post-transcriptional regulation of endogenous RNAJ Biol EngAbil Z, Denard CA, Zhao HGolden Gate Assembly, DNA Assembly and Cloning
2014Enhanced gene disruption by programmable nucleases delivered by a minicircle vector.Gene TherA-Bk Dad, S Ramakrishna, M Song, H KimGenome Editing
1992Identification of surrogate rodent hosts for larval Onchocerca lienalis and induction of protective immunity in a model system.J Parasitol.Abraham, D., Eberhard, M.L., Lange, A.M., Yutanawiboonchai, W., Perler, F.B.and Lok, J.B.
2002Development of a Positive Genetic Selection System for Inhibition of Protein Splicing Using Mycobacterial Inteins in Escherichia coli DNA Gyrase Subunit A.J.Mol.Micro.Biotechnol.Adam, E.and Perler, F.B.
2008Cellular Ser/Thr-kinase assays using generic peptide substrates Curr. Chem. Gen. Adams D. G. et al.
1995Extremozymes: expanding the limits of biocatalysis.BiotechnologyAdams, M.W.W., Perler, F.B.and Kelly, R.M.
1996Plant methyltransferases and thier targets in the plant genome. In: Epigenetic Mechanisms of Gene RegulationCold Spring Habor Laboratory PressAdams, R.L.P. Pradhan, S., Johnson, C.A, Lindsay, H., Shek, E.W.L., Jenkins, G.I., Urwin, N.A.R.
2009 The Krüppel-like zinc finger protein Glis3 directly and indirectly activates insulin gene transcription  Nucleic Acids Res. adr, C.E., Hewett, J.W., Breakefield, X.O. and Tannous, B.A.
2016Jmjd2/Kdm4 demethylases are required for expression of Il3ra and survival of acute myeloid leukemia cellsGenes & DevAgger, K. et al.
2016Training the Next Generation of Biomedical Investigators in Glycosciences.J. Clin. Invest.Agre, P., Bertozzi, C., Bissell, M., Campbell, K., Cummings, R., Desai, U., Estes, M., Flotte, T., Fogleman, G.,Gage, F., Ginsburg, D., Gordon, J.I., Hart, G., Hascall, V., Kiessling, L., Kornfeld, S., Lowe, J., Magnani, J., Mahal, L.K., Medzhitov, R., Roberts, R., Sackstein, R., Sarkar, R., Schnaar, R., Schwartz, N., Varki, A., Walt, D., Weissman, I.
2009A new family of receptor tyrosine kinases with a venus flytrap binding domain in insects and other invertebrates activated by aminoacidsPLoS One Ahier A. et al.
2012A terracotta bio-batteryBioresour TechnolAjayi, F.F., Weigele, P.R.
2015Differential connectivity of splicing activators and repressors to the human spliceosomeGenome Biol.Akerman, M., Fregoso, Ol., Das, S., Ruse, C., Jensen, M.A., Pappin, D.J., Zhang, M.Q., Krainer, A.R.
2016Comprehensive Profiling of Glycosphingolipid Glycans Using a Novel Broad Specificity Endoglycoceramidase in a High-Throughput Workflow.Albrecht, S., Vainauskas, S., Stöckmann, H., McManus, C., Taron, C.H. and Rudd, P.M.
2013GoldenBraid 2.0: A Comprehensive DNA Assembly Framework for Plant Synthetic BiologyPlant PhysiologyAlejandro Sarrion-Perdigones, Marta Vazquez-Vilar, Jorge Palací, Bas Castelijns, Javier Forment, Peio Ziarsolo, José Blanca, Antonio Granell, Diego OrzaezGolden Gate Assembly
2014Polynucleotide 3'-terminal phosphate modifications by RNA and DNA ligasesJournal of Biological ChemistryAlexander M. Zhelkovsky and Larry A. McReynolds
2015Expanding the MDx toolbox for filarial diagnosis and surveillanceTrends Parasitol.Alhassan, A., Li, Z., Poole, C.B. and Carlow, C.K.S.
2014A simple isothermal DNA amplification method to screen black flies for Onchocerca Volvulus infectionPLoS OneAlhassan, A., Makepeace, B.L., LaCourse, E.J., Osei-Atweneboana, M.Y., Carlow, C.K.S.
2016Comparison of a new visual isothermal nucleic acid amplification test with PCR and skin snip analysis for diagnosis of onchocerciasis in humans.Mol Biochem Parasitol.Alhassan, Aa, Osei-Atweneboana, M.Y., Kyeremeh, K.F., Poole, C.B., Li, Z., Tettevi, E., Tanner, N.A. and Carlow, C.K.
1996Thermostable Bst DNA polymerase I lacks a 3' fwdarw 5' proofreading exonuclease activity1.Genetic Analysis Biomolecular Engineering Aliotta, J.M., Pelletier, J.J., Ware, J.L., Moran, L.S., Benner, J.S., and Kong, H.
2013Fully assembled genome sequence for Salmonella enterica subsp. Enterica Serovar Javiana CFSAN001992.  Genome Announcements Allard, M.W. Muruvanda, T., Strain, E., Timme, R., Luo, Y., Wang, C., Keys, C.E., Payne, J., Cooper, T. Luong, K., Song, Y., Chin, C.-S., Korlach, J., Roberts, R.J., Evans, P., Musser, S.M., Brown, E.W.
2015A New Approach to Produce HIV-1 Envelope Trimers: BOTH CLEAVAGE AND PROPER GLYCOSYLATION ARE ESSENTIAL TO GENERATE AUTHENTIC TRIMERS.J Biol ChemAlSalmi W., Mahalingam M., Ananthaswamy N., Hamlin C., Flores D., Gao G., Rao V.B.
2015Developmental exposure to 2,3,7,8-tetrachlorodibenzo-p-dioxin alters DNA methyltransferase (dnmt) expression in zebrafish (Danio rerio)Toxicol Appl PharmacolAluru N, Kuo E, Helfrich LW, Karchner SI, Linney EA, Pais JE, Franks DG
1996Comparative analysis of expression of the SalI restriction-modification system in Escherichia coli and StreptomycesMol. Gen. Genet.Alvarez, M.A., Gomez, A., Gomez, P., Brooks, J.E., Rodicio, M.R.
2010Ligand regulation of the quaternary organization of cell surface M3 muscarinic acetylcholine receptors analyzed by fluorescence resonance energy transfer (FRET) imaging and homogenous time-resolved FRET J. Biol. Chem. Alvarez-Curto J. et al.
2015Rational design of 'controller cells' to manipulate protein and phenotype expression.Metab EngAmin Zargar, David N Quan, Milad Emamian, Chen Yu Tsao, Hsuan-Chen Wu, Chelsea R Virgile, William E BentleyHigh-Fidelity PCR
2005Chracterization of a thermostable UvrD helicase and its participation in helicase-dependent amplification.J.Biol.Chem.An.L., Tang, W., Ranalli, T.A., Kim, H-J., Wytiaz, J.and Kong, H.
2013Hedgehog Signaling Regulates MyoD Expression and ActivityJ Biol ChemAnastassia Voronova Erin Coyne, Ashraf Al Madhoun, Joel V. Fair, Neven Bosiljcic, Catherine St-Louis, Grace Li, Sherry Thurig, Valerie A. Wallace, Nadine Wiper-Bergeron, and Ilona S. Skerjanc
2013DNMT1-interacting RNAs block gene-specific DNA methylationNatureAnnalisa Di Ruscio, Alexander K. Ebralidze, Touati Benoukraf, Giovanni Amabile, Loyal A. Goff, Jolyon Terragni, Maria Eugenia Figueroa, Lorena Lobo De Figueiredo Pontes, Meritxell Alberich-Jorda, Konstantin K. Ebralidze, Sriharsa Pradhan, John L. Rinn, Daniel G. Tenen
2013Segregation of Family A G Protein Coupled Receptor Protomers in the Plasma MembraneMolecular PharmacologyAnthony Gavalas, Tien-Hung Lan, Qiuju Liu, Ivan R. Corrêa, Jr., Jonathan A. Javitch, and Nevin A. Lambert
2014Objective: biochemical functionFront GenetAnton BP, Kasif S, Roberts RJ, Steffen M
2013The COMBREX project design methodology and initial resultsPLOS ONE Anton BP, Chang YC, Brown P, Choi HP, Faller LL, Guleria J, Hu Z, Klitgord N, Levy-Moonshine A, Maksad A, Mazumdar V, McGettrick M, Osmani L,Pokrzywa R, Rachlin J, Swaminathan R, Allen B, Housman G, Monahan C, Rochussen K, Tao K, Bhagwat AS, Brenner SE, Columbus L, de Crécy-Lagard V, Ferguson D, Fomenkov A, Gadda G, Morgan RD, Osterman AL, Rodionov DA, Rodionova IA, Rudd KE, Söll D, Spain J, Xu SY, Bateman A,Blumenthal RM, Bollinger JM, Chang WS, Ferrer M, Friedberg I, Galperin MY, Gobeill J, Haft D, Hunt J, Karp P, Klimke W, Krebs C, Macelis D, Madupu R, Martin MJ, Miller JH, O'Donovan C, Palsson B, Ruch P, Setterdahl A, Sutton G, Tate J, Yakunin A, Tchigvintsev D, Plata G, Hu J, Greiner R, Horn D,Sjölander K, Salzberg SL, Vitkup D, Letovsky S, Segrè D, DeLisi C, Roberts RJ, Steffen M, Kasif S.
2004The first amendment and scientific freedom in the era of bioterrorism.J.Biolaw and BusinessAnton, B.P.
2013VectorsBrenner's Encyclopedia of GeneticsAnton, B.P.
2016Complete Genome Sequence of NEB 5-alpha, a Derivative of Escherichia coli K-12 DH5 alpha.Genome Announc. Anton, B.P. and Raleigh, E.A.
2016Complete Genome Sequence of the Engineered Escherichia coli SHuffle Strains and Their Wild-Type Parents Genome Announc.Anton, B.P., Fomenkov, A., Raleigh, E.A. and Berkmen, M.
2016Comparative Methylome Analysis of the Occasional Ruminant Respiratory Pathogen Bibersteinia trehalosi.PLoS OneAnton, B.P., Harhay, G.P., Smith, T.P., Blom, J. and Roberts, R.J.
1997Cloning and characterization of the BglII restriction-modification system reveals a possible evolutionary footprint.GeneAnton, B.P., Heiter, D.F., Benner, J.S., Hess, E.J., Greenough, L., Moran, L.S., Slatko, B.E., and Brooks, J.E.
2015Complete Genome Sequence of ER2796, a DNA Methyltransferase-Deficient Strain of Escherichia coli K-12PLoS OneAnton, B.P., Mongodin, E.F., Agrawal, S., Fomenkov, A., Byrd, D.R., Roberts, R.J. and Raleigh, E.A.
2010Functional characterization of the YmcB and YqeV tRNA methylthiotransferases of Bacillus subtilis.Nucl.Acids.Res.Anton, B.P., Russell, S.P., Vertrees, J., Kasif, S., Raleigh, E.A., Limbach, P.A.and Roberts, R.J.
2008RimO, a MiaB-like enzyme, methylthiolates the universally conserved Asp88 residue of ribosomal protein S12 in Escherichia coli.Proc Natl Acad Sci.Anton, B.P., Saleh, L., Benner, J.S., Raleigh, E.A., Kasif, S.and Roberts, R.J.
2004Transposon-mediated linker insertion scanning mutagenesis of the Escherichia coli McrA endonuclease.J.Bacteriol.Anton, B.P.and Raleigh, E.A.
2007Dynamic developmental elaboration of N-linked glycan complexity in the Drosophila melanogaster embryoJ. Biol. Chem. Aoki, K., Perlman, M., Lim, J.M., Cantu, R., Wells, L., Tiemeyer, M.
2015Development of a Rapid, Simple Method for Detecting Naegleria fowleri Visually in Water Samples by Loop-Mediated Isothermal Amplification (LAMP).PLoS OneAongart Mahittikorn, Hirotake Mori, Supaluk Popruk, Amonrattana Roobthaisong, Chantira Sutthikornchai, Khuanchai Koompapong, Sukhontha Siri, Yaowalark Sukthana, Duangporn NacapunchaiIsothermal Amplification
2014Tuning the electrical properties of the heart by differential trafficking of KATP ion channel complexesJ Cell SciArakel EC, Brandenburg S, Uchida K, Zhang H, Lin YW, Kohl T, Schrul B, Sulkin MS, Efimov IR, Nichols CG, Lehnart SE, Schwappach BGlycobiology
2016Adaptive genetic variation distinguishes Chilean blue mussels (Mytilus chilensis) from different marine environments.Ecol Evol. Araneda C, Larraín MA, Hecht B, Narum S.
1987Brugia malayi: recombinant antigens expressed by genomic DNA clones.Exp.Parasitol.Arasu , P., Philipp, M., and Perler, F.
1987Genomic Cloning of Recombinant Antigens Detected by Antiserum Against Infective Larvae of Brugia Malayi.Molecular Paradigms for Eradicating Helminthic ParasitesArasu, P., and Perler, F.B.
1989Human T-cell stimulation, molecular characterization and in situ mRNA localization of a Brugia malayi recombinant antigen.Mol.Biochem.Parasitol.Arasu, P., Nutman, T.B., Steel, C., Mulligan, M.M., Abraham, D., Tuan, R.S., and Perler, F.B.
2010In vitro genetic reconstruction of bacterial transcription initiation by coupled synthesis and detection of RNA polymerase holoenzyme Nucleic Acids Res. Asahara, H. and Chong, S.
2010In vitro genetic reconstruction of bacterial transcription initiation by coupled synthesis and detection of RNA polymerase holoenzyme.Nucl.Acids.Res.Asahara, H.and Chong, S.
2015Targeted Glycoengineering Extends the Protein N-glycosylation Pathway in the Silkworm Silk GlandInsect Biochem Mol BiolAsazuma HM., Sohn BH., Kim Y.S., Kuo CW., Khoo KH., Kucharski CA., Fraser MJ., Jarvis DL.
2008Bioluminescent virion shells; new tools for quantitation of AAV vector dynamics in cells and live animalsGene Ther.Asokan, A., Johnson, J.S., Li, C., Samulski, R.J.
1991Cross-linking of a monoclonal antibody-antigen complex enables detection of parasite antigen in immunoblots and in an expression library.Mol.Biochem.Parasitol.Awobuluyi, M., Mania, C.V., and Carlow, C.K.S.
2008DNA distortion and specificity in a sequence-specific endonuclease.J.Mol.Biol.Babic, A.C., Little, E.J., Manohar, V.M., Bitinaite, J., Horton, N.C.
2008Construction of intein mediated hGMCSF expression vector and its prufication in Pichia pastorisProtein Exp. Purif.Babu, S.K., et. al.
2001Recombinant human DNA (cytosine-5) methyltransferase.III.Allosteric control, reaction order, and influence of plasmid topology and triplet repeat length on methylation of the fragile X CGGCCG sequence.J.Biol.Chem.Bacolla, A., Pradhan, S., Larson, J.E., Roberts, R.J.and Wells, R.D.
1999Human DNA (Cytosine-5) Methyltransferase.II.steady-state kinetics reveal allostericactivation by methylated DNA.J.Biol.Chem.Bacolla, A., Pradhan, S., Roberts, R.J.and Wells, R.D.
2007A highly sensitive assay for monitoring the secretory pathway and ER stress PLoS One Badr, C.E., Hewett, J.W., Breakefield, X.O. and Tannous, B.A.
2007A highly sensitive assay for monitoring the secretory pathway and ER stress.PLoS OneBadr. C.E., Hewett, J.W., Breakefield, X.Q and Tannous, B.A.
1994Ligand-induced conformational states of the cytosine-specific DNA methyltransferase M.HgaI-2.J.Mol.Biol.Baldwin, G.S., Kelly, S.M., Price, N.C., Wilson, G.G., Connolly, B.A., Artymiuk, P.J., and Hornby, D.P.
1994Expression, purification, and crystallization of restriction endonuclease PvuII with DNA containing its recognition siteProteinsBalendiran, K., Bonventre, J., Knott, R., Jack, W., Benner, J., Schildkraut, I., and Anderson, J.E.
2010Peptides from phage display library modulate gene expression in mesenchymal cells and potentiate osteogenesis in unicortical bone defectsVis. Exp.Balian, G. et al.Phage Display
2008 Caged substrates for protein labeling and immobilizationChembiochem Banala J. et al.
2008Caged substrates for protein labeling and immobilizationChembiochem Banala J. et al.
1999Wolbachia genomes and the many faces of symbiosis.Parasitology Today Bandi, C., Slatko, B.and O'Neill, S.L.
2009Indo-1 Derivatives for local calcium sensingJACS Chemical Biology Bannwarth et. al.
2007Expression and purification of BmrI restriction endonuclease and its N-terminal cleavage domain variants.Protein Expr.Purif.Bao, Y., Higgins, L., Zhang, P., Chan, S-H., Laget, S., Sweeney, S., Lunnen, K.and Xu, S-Y.
2008Expression and purification of BmrI restriction endonucleases and its N-terminal cleavage domain variantsBao, Y., Higgins, Zhang, P., Chan, S.H., Lagaet, S., Sweeney, S., Lunnen, K., Xu, S.Y.
1992The corrected nucleotide sequences of the TaqI restriction and modification enzymes reveal a thirteen-codon overlap.GeneBarany, F., Slatko, B., Danzitz, M., Cowburn, D., Schildkraut, I., and Wilson, G.G.
1999Plasmodium vivax, P.cynomolgi, and P.knowlesi: Identification of Homologue Proteins Associated with the Surface of Merozoites.Exp.Parasitol.Barnwell, J.W., Galinski, M.R., DeSimone, S.G., Perler, F.and Ingravallo, P.
1989Site-directed mutagenesis of the EcoRV methylase for the study of the functional role of the conserved sequences in N6-adenine methylasesJ. Cell BiochemBarshevsky,T. and Benner J.S.
1988Cloning of the HhaI and HinPI restriction-modification systems.GeneBarsomian, J.M., Card, C.O., and Wilson, G.G.
2008Crucial role of aspartic acid at position 265 in the CH2 domain for murine IgG2a and IgG2b Fc-associated effector functions J Immunol. Baudino L, Shinohara Y, Nimmerjahn F, Furukawa J, Nakata M, Martínez-Soria E, Petry F, Ravetch JV, Nishimura S, Izui S.
2016The Inhibitory Effect of Non-Substrate and Substrate DNA on the Ligation and Self-Adenylylation Reactions Catalyzed by T4 DNA Ligase. PLoS OneBauer, R.J., Evans, T.C. Jr. and Lohman, G.J.
2017Rapid Time Scale Analysis of T4 DNA Ligase–DNA Binding.BiochemistryBauer, R.J., Jurkiw, T.J., Evans, T.C. Jr. and Lohman, G.J.
2014Biomimetic Magnetite Formation From Biocombinatorial Approaches to Mineralization EffectsLangmuirBaumgartner J, Carillo MA, Eckes KM, Werner P, Faivre D.Phage Display
2015Terminal Mannose Residues in Seminal Plasma Glycoproteins of Infertile Men Compared to Fertile DonorsInt J Mol SciBeata O., Jarząb A., Kratz E., Zimmer M., Gamian A., Ferens-Sieczkowska M.
2013Digital droplet PCR for rapid quantification of donor DNA in the circulation of transplant recipients as a potential universal biomarker of graft injury.Clin. Chem.Beck J, Bierau S, Balzer S, Andag R, Kanzow P, Schmitz J, Gaedcke J, Moerer O, Slotta JE, Walson P, Kollmar O, Oellerich M, Schütz E.
2015Multivalent site-specific phage modification enhances the binding affinity of receptor ligandsBioconjug ChemBeech, J., Saleh, L., Frentzel, J., Figler, H., Correa, I.R. Jr., Baker, B., Ramspacher, C., Marshall, M., Dasa, S., Linden, J., Noren, C.J. and Kelly, K.A.
1997Homing endonucleases: keeping the house in order.Nucl.Acids Res.Belfort, M., and Roberts, R.J.
2005Cleavage of individual DNA strands by the different subunits of the heterodimeric restriction endonuclease BbvCI.J.Mol.Biol.Bellamy, S.R.W., Milsom, S.E., Scott, D.J., Daniels, L.E., Wilson, G.G.and Halford, S.E.
2013Three-color single molecule imaging shows WASP detachment from Arp2/3 complex triggers actin filament branch formation eLifeBenjamin A Smith, Shae B Padrick, Lynda K Doolittle, Karen Daugherty-Clarke, Ivan R Corrêa Jr, Ming-Qun Xu, Bruce L Goode3, Michael K Rosen, Jeff Gelles
2012Oxidative folding of proteins in Escherichia coliBioPharm InternationalBerkmen, M.
2012Oxidative folding of proteins in Escherichia coliBioProcess InternationalBerkmen, M.
2012Production of disulfide-bonded proteins in Escherichia coliProtein Expression and PurificationBerkmen, M.
Production of disulfide-bonded proteins in Escherichia coliBerkmen, M.
2009EcR-B1 and Usp nuclear hormone receptors regulate expression of the VM32E eggshell gene during Drosophila  oogenesis.Dev.Biol.Bernardi, F., Romani, P., Tzertzinis, G., Gargiulo, G.and Cavaliere V.
2006Evidence supporting a cisi-enedio-based mechanism for Pyrococcus furiousus phophoglucose isomerase.J Mol Biol.Berrisford, J.M., Hounslow, A.M., Akerboom, J., Hagen, W.R., Brouns, S.J., van der Oost, J., Murray, I.A., Michael Blackburn, G., Waltho, J.P., Rice, D.W.and Baker, P.J.
2014Integration of growth and patterning during vascular tissue formation in ArabidopsisScienceBert De Rybel, Milad Adibi, Alice S. Breda, Jos R. Wendrich, Margot E. Smit, Ondej Novk, Nobutoshi Yamaguchi, Saiko Yoshida, Gert Van Isterdael, Joakim Palovaara, Bart Nijsse, Mark V. Boekschoten, Guido Hooiveld, Tom Beeckman, Doris Wagner, Karin Ljung, Christian Fleck, Dolf WeijersHigh-Fidelity PCR
2001Converting MlyI endonuclease into a nicking enzyme by changing its oligomerization state.EMBO Reports Besnier, C.E.and Kong, H.
1998Evaluation of the ASSURE/FH Antibody Assay for the Detection of Feline Heartworm Infection.Proc.Amer.Heartworm Symp.Bestul, K.J., McCall, J.W., Supakorndej, N., Ma, D., Carlow, C.K.S.
2007New and easy strategy for cloning, expression, purification, and characterization of the 5S subunit of transcarboxylase from Propionibacterium f. shermaniiPrep. Biochem. Biotechnol.Bhat, R. K. and Berger, S.
2013Genome-wide hydroxymethylation tested using the HELP-GT assay shows redistribution in cancerNucleic Acids ResearchBhattacharyya, S., Yu, Y., Suzuki, M., Campbell, N., Mazdo, J., Vasanthakumar, A., et al.5-hmC Detection & Analysis, Methods of 5-hmC Detection and Analysis
2000A simple in vitro Tn7-based transposition system with low target site selectivity for genome and gene analysis.Nucl.Acids Res.Biery, M.C., Stewart, F.J., Stellwagen, A.E., Raleigh, E.A.and Craig, N.L.
2014A Modular Plasmid Assembly Kit for Multigene Expression, Gene Silencing and Silencing Rescue in PlantsPLoS OneBinder A, Lambert J, Morbitzer R, Popp C, Ott T, Lahaye T, Parniske MGolden Gate Assembly, DNA Assembly and Cloning
2015Alternative 3' UTRs act as scaffolds to regulate membrane protein localization.NatureBinyamin D Berkovits, Christine MayrHigh-Fidelity PCR
2002Evolutionary relationship of Alw261, Eco31I and Esp3I, restriction endonucleases that recognise overlapping sequencesMol. Genet. GenomicsBitinaite, J., Mitkaite, G., Dauksaite, V., Jakubauskas, A., Timinskas, A., Vaisvila, R., Lubys, A., Janulaitis, A.
2007USER friendly DNA engineering and cloning method by uracil excisionNucl.Acids.Res.Bitinaite, J., Rubino, M., Varma, K.H., Schildkraut, I., Vaisvila, R.and Vaiskunaite, R.
1998FokI Dimerization is Required for DNA Cleavage.Proc.Natl.Acad.Sci.USA Bitinaite, J., Wah, D.A., Aggarwal, A.K., Schildkraut, I.
2009DNA Cloning and Engineering by Uracil Excision.Curr.Protoc.Mol.Biol.Bitinaite, J.and Nichols, N.M.
2002Self-generated DNA termini relax the specificity of SgrAI restriction endonuclease.Proc.Natl.Acad.Sci.USA Bitinaite, J.and Schildkraut, I.
2014Clathrin-independent pathways do not contribute significantly to endocytic fluxElifeBitsikas V, Corrêa IR, Nichols BJ
1999Parasitic helminth genomics.Exp.Parasitol.Blaxter, M., Aslett, M., Guiliano, D., Daub, J.and The Filarial Genome Project
2016Reminder to deposit DNA sequencesScienceBlaxter, M., Danchin, A., Savakis, B., Fukami-Kobayashi, K., Kurokawa, K., Sugano, S., Roberts, R.J., Salzberg, S.L. and Wu, C.I.
1996Genes expressed in Brugia malayi infective third stage larvae.Mol.Biochem.Parasitol.Blaxter, M.L., Raghavan, N., Ghosh, I., Guiliano, D., Lu, W., Williams, S.A., Slatko, B.and Scott, A.L.
2016The Epigenomic Landscape of Prokaryotes.PLoS Genet.Blow, M.J., Clark, T.A., Daum, C.G., Deutschbauer, A.M., Fomenkov, A., Fries, R., Froula, J., Kang, D.D., Malmstrom, R.R., Morgan, R.D., Posfai, J., Singh, K., Visel, A., Wetmore, K., Zhao, Z., Rubin, E.M., Korlach, J., Pennacchio, L.A. and Roberts, R.J.
2009Site specific conjugation of fluoroprobes to the remodeled Fc N-glycans of monoclonal antibodies using mutant glycosyltransferases: application for cell surface antigen detection Bioconjug. Chem. Boeggeman, E., Ramakrishnan, B., Pasek, M., Manzoni, M., Puri, A., Loomis, K.H., Waybright, T.J., Qasba, P.K. Glycobiology
2009Illuminating the life of GPCRsCell Commun. Signal Böhme I and Beck-Sickinger A. G.
2007Tracking of human Y receptors in living cells- A fluorescence approachPeptidesBöhme. et al.
2015Single-molecule visualization of a formin-capping protein 'decision complex' at the actin filament barbed endNat Commun.Bombardier, J.P., Eskin, J.A., Jaiswal, R., Correa, I.R., Jr., Xu, M.Q., Goode, B.L. and Gelles, J.
2015Using Next Generation RAD Sequencing to Isolate Multispecies Microsatellites for Pilosocereus (Cactaceae).PLoS One. Bonatelli IA, Carstens BC, Moraes EM.
2010Molecular diagnosis of neonatal diabetes mellitus using next-generation sequencing of the whole exome PLoS One Bonnefond, A., Durand, E., Sand, O. et al
2003Purification and characterization of the beta-trefoil fold protein barley alpha-amylase/subtilisin inhibitor overexpressed in Escherichia coliProtein Expr. Purif. Bonsager, B.C., et al.
2001Molecular Biology Problem Solver: A Laboratory GuideBonventre, J., Walsh, P.and Robinson, D.
2013Characterization of the 5-hydroxymethylcytosine-specific DNA restriction endonucleasesNucleic Acids Res.Borgaro, J.G. and Zhu, Z.
2013Fidelity index determination of DNA methyltransferasePLoS OneBorgaro, J.G., Benner, N., Zhu, Z.
2014Evaluation of fluorophores to label SNAP-tag fused proteins for multicolor single-molecule tracking microscopy in live cellsBosch PJ, Corrêa IR Jr, Sonntag MH, Ibach J, Brunsveld L, Kanger JS, Subramaniam V
2007UHRF1 Plays a Role in Maintaining DNA Methylation in Mammalian Cells.ScienceBostick, M., Kim, J.K., Esteve, P-O., Clark, A., Pradhan, S and Jacobsen, S.
2014Role of lipid rafts and GM1 in the segregation and processing of prion proteinPLoS OneBotto L, Cunati D, Coco S, Sesana S, Bulbarelli A, Biasini E, Colombo L, Negro A, Chiesa R, Masserini M, Palestini PGlycobiology
2017Whole genome amplification provides suitable control DNA for use in DNA barcoding applicationsBiop.Bourque, D.A., Naaum, A.M., Distel, D.L., Hanner, R.H.
2016Global repositioning of transcription start sites in a plant-fermenting bacterium.Nat CommunBoutard, M., Ettwiller, L., Cerisy, T., Alberti, A., Labadie, K., Salanoubat, M., Schildkraut, I. and Tolonen, A.C.
2010Optimizing Clarification and Concentration Steps Using an Automated Process System and Design of Experiments (DoE).BioProcessing Journal Bowen, T.L., Blake, C., Cohen, D.R.and Walsh, K.
2010The Deinococcus radiodurans Snf2 intein caught in the act: Detection of the Class 3 intein signature Block F.branched intermediate.Protein Sci.Brace, L.E., Southworth, M.W., Tori, K., Cushing, M.L.and Perler, F.
1993A sensitive serodiagnostic test for onchocerciasis using a cocktail of recombinant antigens.Am J Trop Med Hyg.Bradley, J.E., Trenholme, K.R., Gillespie, A.J., Guderian, R., Titanji, V., Hong, Y., and McReynolds, L.
2008A target-unrelated peptide in an M13 phage display library traced to an advantageous mutation in the gene II ribosome-binding site.Anal.Biochem.Brammer, L.A., Bolduc, B., Kass, J.L., Felice, K.M., Noren, C.J.and Hall, M.F.
2016Sensitive Detection of Plasmodium vivax Using a High-Throughput, Colourimetric Loop Mediated Isothermal Amplification (HtLAMP) Platform: A Potential Novel Tool for Malaria Elimination.PLoS Negl Trop DisBritton, S., Cheng, Q., Grigg, M.J., Poole, C.B., Pasay, C., William, T., Fornace, K., Anstey, N.M., Sutherland, C.J., Drakeley, C. and McCarthy, J.S.
1987Properties and uses of restriction endonucleases.Methods Enzymol.Brooks, J.E.
1989Cloning the BamHI restriction modification system.Nucl.Acids Res.Brooks, J.E., Benner, J.S., Heiter, D.F., Silber, K.R., Sznyter, L.A., Jager-Quinton, T., Moran, L.S., Slatko, B.E., Wilson, G.G., and Nwankwo, D.O.
1988Cloning and characterization of the BamHI restriction modification systemGeneBrooks, J.E., Benner, J.S., Silber, K.R., Heiter, D.F., Sznyter, L.A., Jager-Quinton, T., Wilson, G.G., Moran, L.S., Slatko, B.E., Nwankwo, D.O.
1983The isolation and characterization of the Escherichia coli DNA adenine methylase (dam) geneNucleic Acids Res.Brooks, J.E., Blumenthal, R.M., Gingeras, T.R.
1991Characterization of the cloned BamHI restriction modification system: its nucleotide sequence, properties of the methylase, and expression in heterologous hosts.Nucl.Acids Res.Brooks, J.E., Nathan, P.D., Landry, D., Sznyter, L.A., Waite-Rees, P., Ives, C.L., Moran, L.S., Slatko, B.E., and Benner, J.S.
1990Cloning and Characterization of the SphI restriction modification system from Streptomyces phaeochromogenesJ Cell BiochemBrooks, J.E., Sznyter, L., Vaccaro, C., Arnaud, M., Jager-Quinton, T., Wilson, G., Moran, L., Slatko, B., Bernan, V.
2015Microscale purification of antigen-specific antibodiesJ Immunol MethodsBrown EP., Normandin E., Osei-Owusu NY., Mahan AE., Chan YN., Lai JI., Vaccari M., Rao M., Franchini G., Alter G., Ackerman ME.
2016Mapping the sex determination locus in the hāpuku (Polyprion oxygeneios) using ddRAD sequencing.BMC Genomics. Brown JK, Taggart JB, Bekaert M, Wehner S, Palaiokostas C, Setiawan AN, Symonds JE, Penman DJ.
2007Diversifying selection and host adaptation in two endosymbiont genomes.BMC Evolutionary BiologyBrownlie, J.C., Adamski, M., Slatko, B.and McGraw, E.A.
2009Semisynthetic fluorescent sensor proteins based on self-labeling protein tagsJ. Am. Chem. Soc. Brun M.A. et al.
2011Chitosan but not chitin activates the inflammasome by a mechanism dependent upon phagocytosis.J Biol Chem.Bueter, C.L., Lee, C.K., Rathinam, V.A., Healy, G.J., Taron, C.H., Specht, C.A.and Levitz, S.M.
2007Viral oncoproteins target the DNA methyltransferasesOncogeneBurgers, W.A., Blanchon, L., Pradhan, S., de Launoit, Y., Kouzarides, T. and Fuks, F.
2007Viral oncoproteins target the DNA methyltransferasesOncogeneBurgers, W.A., Blanchon, L., Pradhan, S., de Launoit, Y., Kouzarides, T., Fuks,F.
2017The GAN exonuclease, or the flap endonuclease Fen1 and RNase HII are necessary for viability of Thermococcus kodakarensisJ. BacteriolBurkhart, B.W., Cubonova, L., Heider, M.R., Kelman, Z., Reeve, J.N., Santangelo, T.J.
2015The use of museum specimens with high-throughput DNA sequen.J Hum Evol. Burrell AS, Disotell TR, Bergey CM.
2016Structure of Type IIL Restriction-Modification Enzyme MmeI in Complex with DNA Has Implications for Engineering New Specificities.PLoS Biol.Callahan, S.J., Luyten, Y.A., Gupta, Y.K., Wilson, G.G., Roberts, R.J., Morgan, R.D. and Aggarwal, A.K.
2011Crystallization and preliminary crystallographic analysis of the Type IIL restriction enzyme MmeI in complex with DNA.Acta Crystallogr.F.Structural biology and crystallization communications Callahan, S.J., Morgan, R.D., Jain, R., Townson, S.A., Wilson, G.,G.Roberts, R.J.and Aggarwal, A.K.
2002 Autoregulation of a bacterial sigma factor explored by using segmental isotopic labeling and NMRProc. Natl. Acad. Sci. USACamarero, J.A., et al.
2010Labeling cell structures and tracking cell lineage in zebrafish using SNAP-Tag Dev. Dynamics Campos, C. et al.
20116-Thioguanine reactivates epigenetically silenced genes in acute lymphoblastic leukemia cells by facilitating proteasome-mediated degradation of DNMT1Canc. Res.
2004A bacteriophage-based genetic system for selection of non-splicing inteins.Appl.Environ.Microbiol.Cann, I.K.O., Amaya, K.R., Southworth, M.W.and Perler, F.B.
2001Intein-mediated rapid purification of cre recombinaseProtein Expr.Purif.Cantor, E.J.and Chong, S.
2010Phage display probes for imaging early response to bevacizumab treatmentAmino AcidsCao, Q. et al.Phage Display
2008A cell-based luciferase assay amenable to high-throughput screening of inhibitors of arenavirus budding.VirologyCapul, A.A. and de la Torre, J.C.
2008A cell-based luciferase assay amenable to high-throughput screening of inhibitors of arenavirus budding Virology Capul, A.A. and de la Torre, J.C.
1987The Use of DNA Sequencing Reactions as Probes for Southern Blots, Dot Blots and Colony Hydridizations.BioTechniquesCard, C.O., Williams, S.A., Moran, L.S., Poole, C.B., and Slatko, B.E.
1990Cloning and characterization of the HpaII methylase gene.Nucl.Acids Res.Card, C.O., Wilson, G.G., Weule, K., Hasapes, J., Kiss, A., and Roberts, R.J.
1987Protective immunity to Brugia malayi larvae in BALB/c mice: potential of this model for the identification of protective antigens.Am.J.Trop.Med.Hyg.Carlow, C.K.S., and Philipp, M.
1990Anti-idiotypic antibodies function as a surrogate surface epitope of Brugia malayi infective larvae.Acta Trop.Carlow, C.K.S., Busto, P., Storey, N., and Philipp, M.
1987Monoclonal antibodies to parasite antigens: a rapid immunization protocol requiring small numbers of parasites.J.Parasitol.Carlow, C.K.S., Edwards, M.K., James, E.R., and Philipp, M.
1987Monoclonal antibody to a unique surface epitope of the human filaria Brugia malayi identifies infective larvae in mosquito vectors.Proc.Natl.Acad.Sci.USA Carlow, C.K.S., Franke, E.D., Lowrie, R.C.J., Partono, F., and Philipp, M.
1987A Developmentally regulated surface epitope expressed by the infective larva of Brugia malayi which is rapidly lost after infection.Molecular Paradigms for Eradicating Helmenthic ParasitesCarlow, C.K.S., Perrone, J., Spielman, A., and Philipp, M.A.
1990Field testing of monoclonal probe specific for infective larvae of human Brugian parasites.Parasites: Molecular Biology, Drug and Vaccine DesignCarlow, C.K.S., Suwita, A., Bahang, Z., Purnomo, Partono, F., and Philipp, M.
1994Restriction and modification. In: Molecular Biology of Bacteriophage T4American Society for Microbiology, Washington, D.C.Carlson, K., Raleigh, E.A. and Hattman, S.
2009 Centromere assembly requires the direct recognition of CENP-A nucleosomes by CENP-NNat. Cell Biol. Carroll C.W. et al.
1999KDR Activation in Astrocytic Neoplasms.CancerCarroll, R.S., Zhang, J., Bello, L., Melnick, M.B., Maruyama, T.and Black, P.M.
2016Hydroxymethyluracil modifications enhance the flexibility and hydrophilicity of double-stranded DNA.Nucleic acids researchCarson, S., Wilson, J., Aksimentiev, A., Weigele, P. R., & Wanunu, M.
1987Cloning, sequencing, in vivo promoter mapping, and expression in Escherichia coli of the gene for the HhaI methyltransferase.J.Biol.Chem.Caserta, M., Zacharias, W., Nwankwo, D., Wilson, G.G., and Wells, R.D.
2010Cofactor requirement of HpyAV restriction endonuclease.PLoS ONEChan, S.H., Opitz, L., Higgins, L., O'loane, D.and Xu, S.Y.
2011Natural and engineered nicking endonucleases--from cleavage mechanism to engineering of strand-specificity.Nucl.Acids.Res.Chan, S.H., Stoddard, B.L.and Xu, S.Y.
2004Cloning of CviPII nicking and modification system from chlorella virus NYs-1 and application of Nt.CviPII in random DNA amplification.Nucl.Acids Res.Chan, S.H., Zhu, Z., Van Etten, J.L.and Xu, S.Y.
2006Cloning of Nt.CviQII nicking endonuclease and its cognate methyltransferase: M.CviQII methylates AG sequences.Protein Expr.Purif.Chan, S.H., Zhu, Z., Van Etten, J.L.and Xu, S.Y.
2007Catalytic domain of restriction endonuclease BmrI as a cleavage module for engineering endonucleases with novel substrate specificities.Nucl.Acids.Res.Chan, S-H, Boa, Y., Ciszak, E., Laget, S.and Xu, S-Y.
2014Myogenic differential methylation: diverse associations with chromatin structureBiology (Basel)Chandra S, Baribault C, Lacey M, Ehrlich MEpigenetics
2015Tissue-specific epigenetics in gene neighborhoods: myogenic transcription factor genesHum Mol GenetChandra, S., Terragni, J., Zhang, G., Pradhan, S., Haushka, S., Johnston, D., Baribault, C., Lacey, M. and Ehrlich, M.
1988Cloning and sequencing the HinfI restriction and modification genes.GeneChandrasegaran, S., Lunnen, K.D., Smith, H.O., and Wilson, G.G.
2016COMBREX-DB: An experiment centered database of protein function: knowledge, predictions and knowledge gaps. Nucl. Acids Res.Chang, Y.-C., Hu, Z., Rachlin, J., Anton, B.P., Kasif, S., Roberts, R.J. and Steffen, M.
2015Converting a Sulfenic Acid Reductase into a Disulfide Bond IsomeraseAntioxid Redox SignalChatelle C, Kraemer S, Ren G, Chmura H, Marechal N, Boyd D, Roggemans C, Ke N, Riggs P, Bardwell J, Berkmen M
2015Converting a Sulfenic Acid Reductase into a Disulfide Bond IsomeraseAntioxid Redox Signal.Chatelle C, Kraemer S, Ren G, Chmura H, Marechal N, Boyd D, Roggemans C, Ke N, Riggs P, Bardwell J, Berkmen M.
2009Expanding the chemical Biologist's tool kit: chemical labelling strategies and its applications Curr. Med. Chem.  Chattopadhaya S. et al.
2009Site-specific covalent labeling of proteins inside live cells using small molecule probesBioorg. Med. Chem.Chattopadhaya, S., et al.
2009Use of intein-mediated protein ligation strategies for the fabrication of functional protein arraysMethods Enzymol.Chattopadhaya, S., et al.
2009Soluble expression and one-step purification of a neurotoxin Huwentoxin-I in Escherichia coliProtein Expr Purif.Che, N., et. al.
2013Efficient genome editing in Caenorhabditis elegans by CRISPR-targeted homologous recombinationNucleic Acids ResChen C, Fenk LA, de Bono MGibson Assembly®
2015Serum N-Glycans: A New Diagnostic Biomarker for Light Chain Multiple MyelomaPLoS OneChen J., Fang M., Zhao YP., Yi CH., Ji J., Cheng C., Wang MM., Gu X., Sun QS., Chen XL., Gao CF.
1989Isolation and characterization of restriction endonuclease BstFI and BstSI from Bacillus stearothermophilus.J.Fudan Univ.Natural Sci.Chen Z., Kong, H.and Wang, L.
1988Isolation and characterization of restriction endonuclease BstYI from Bacillus stearothermophilus.FEBS Lett.Chen Z.and Kong, H.
2016High-efficiency generation of induced pluripotent mesenchymal stem cells from human dermal fibroblasts using recombinant proteins.Stem Cell Res Ther.Chen, F., Zhang, G., Yu, L., Feng, Y., Li, X., Zhang, Z., Wang, Y., Sun, D. and Pradhan, S.
2010Chemically ubiquitylated PCNA as a probe for eukaryotic translesion DNA synthesisNat. Chem. Biol. Chen, J., et al.
2016Genetically anchored fluorescent probes for subcellular specific imaging of hydrogen sulfide.AnalystChen, J., Zhao, M., Jiang, X., Sizovs, A., Wang, M.C., Provost, C.R., Huang, J. and Wang, J.
2000Protein Splicing in the Absence of an Intein Penultimate Histidine.J.Biol.Chem.Chen, L., Benner, J.and Perler, F.
2017DNA damage is a pervasive cause of sequencing errors, directly confounding variant identificationScienceChen, L., Liu, P., Evans, T.C., Jr., Ettwiller, L.M.
2001Herbicide resistance from a divided EPSPS protein: the split Synechocystis DnaE intein as an in vivo affinity domain.Gene Chen, L., Pradhan, S.and Evans, T.C.Jr.
2016A DsbA-Deficient Periplasm Enables Functional Display of a Protein with Redox-Sensitive Folding on M13 Phage.BiochemistryChen, M., Samuelson, J.C.
2002Crystallographic study of a naturally occurring trans-splicing intein from Synechocystis sp.PCC 6803.Acta Crystallogr.D.Biol.Crystallogr.Chen, X., Xu, M.-Q., Ding, Y., Ferrandon, S.and Rao, Z.
2002Purification and initial crystallization studies of a DnaB intein from Synechocystis sp.PCC 6803.Acta Crystallogr.D.Biol.Crystallogr.Chen, X., Xu, M.-Q., Ding, Y., Ferrandon, S.and Rao, Z.
2008Expression of a cytotoxic cationic antibacterial peptide in Escherichia coli using two fusion partnersProtein Exp. Purif.Chen, Y. Q., et. al.
1994Identification of a new type-II restriction enzyme BsrGI from Bacillus stearothermophilus GR75Chinese Sci. Bull.Chen, Z.F., Pan, X.S.
2007An improved and secreted luciferase reporter for schistosomes.Mol. Biochem. Parasitol.Cheng, G. and Davis, R.E.
2007An improved and secreted luciferase reporter for schistosomes  Mol. Biochem. Parasitol. Cheng, G. and Davis, R.E.
2007In vivo translation and stability of trans-spliced mRNAs in nematode embryos.Mol. Biochem. Parasitol.Cheng, G., Cohen, L., Mikhli, C, Jankowska-Anyszka, M., Stepinski, J., Darzynkiewicz, E. and Davis, R.E
2007In vivo translation and stability of trans-spliced mRNAs in nematode embryosMol. Biochem. Parasitol. Cheng, G., Cohen, L., Mikhli, C., Jankowska-Anyszka, M., Stepinski, J., Darzynkiewicz, E. and Davis, R.E.
1994Structure of PvuII endonuclease with cognate DNA.EMBO J.Cheng, X., Balendiran, K., Schildkraut, I., and Anderson, J.E.
1995Crystal structure of the PvuII restriction endonuclease.GeneCheng, X., Balendiran, K., Schildkraut, I., and Anderson, J.E.
1993Crystal Structure of the HhaI DNA Methyltransferase.Cheng, X., Kumar, S., Klimasauskas, S., and Roberts, R.J.
1993Crystal structure of the HhaI DNA methyltransferase complexed with S-adenosyl-L-methionine.CellCheng, X., Kumar, S., Posfai, J., Pflugrath, J.W., and Roberts, R.J.
2001AdoMet-dependent methylation, DNA methyltransferases and base flipping.Nucl.Acids Res.Cheng, X.and Roberts, R.J.
2010Base Flipping.Encyclopedia of Life SciencesCheng, X.and Roberts, R.J.
2014Traceless splicing enabled by substrate induced activation of the Nostoc punctiforme Npu DnaE intein after mutation of a catalytic cystein to serineJ Mol Biol.Cheriyan, M., Chan, S-H., Perler, F.
2013Faster Protein Splicing with the Nostoc punctiforme DnaE Intein Using Non-native Extein ResiduesJ Biol ChemCheriyan, M., Pedamallu, C.S., Tori, K. and Perler, F.
2009Protein Splicing: A Versatile Tool for Drug Discovery.Adv.Drug Deliv.Rev.Cheriyan, M.and Perler, F.B.
2015Depletion of CG-Specific Methylation in Mycoplasma hyorhinis Genomic DNA after Host Cell InvasionPLoS OneChernov AV., Reyes L., Peterson S., Strongin AY.Epigenetics, Bisulfite Conversion
2008 A designed protein for the specific and covalent heteroconjugation of biomolecules Bioconj. Chem. Chidley C. et al.
2007Automethylation of G9a and its implication in wider substrate specificity and HP1 binding.Nucl.Acids.Res.Chin, H.G., Esteve, P.O., Pradhan, M., Benner, J., Patnaik, D., Carey, M.F., and Pradhan, S.
2003Protein trans-splicing in transgenic plant chloroplast: Reconstruction of herbicide resistance from split genes.Proc.Natl.Acad.Sci.USA Chin, H.G., Kim, G.D., Marin, I., Mersha, F., Evans, T.C.Jr., Chen, L., Xu, M.-Q.and Pradhan, S.
2006Catalytic properties and kinetic mechanism of human recombinant Lys-9 histone H3 methyltransferase SUV39H1: participation of the chromodomain in enzymatic catalysis.BiochemistryChin, H.G., Patnaik, D., Esteve, P.O., Jacobsen, S.E.and Pradhan.S.
2016Transcription factor LSF-DNMT1 complex dissociation by FQI1 leads to aberrant DNA methylation and gene expression.OncotargetChin, H.G., Ponnaluri, C., Zhang, G., Esteve, P., Schaus, S.E., Hansen, U. and Pradhan, S.
2005Sequence Specificity and Role of Proximal Amino Acids of the Histone H3 Tail on Catalysis of Murine G9a Lysine 9 Histone H3 Methyltransferase.BiochemistryChin, H.G., Pradhan, M., Esteve, P., Patnaik, D., Evans, T.C.Jr.and Pradhan, S.
2014Neurospora crassa Female Development Requires the PACC and Other Signal Transduction Pathways, Transcription Factors, Chromatin Remodeling, Cell-To-Cell Fusion, and AutophagyPLoS OneChinnici JL, Fu C, Caccamise LM, Arnold JW, Free SJGibson Assembly®,
2013Biochemical Characterization of Hypothetical Proteins from Helicobacter pylori.PLOS ONE Choi HP, Juarez S, Ciordia S, Fernandez M, Bargiela R, Albar JP, Mazumdar V, Anton BP, Kasif S, Ferrer M, Steffen M.
2014Overview of cell-free protein synthesis: historic landmarks, commercial systems, and expanding applicationsCurr Protoc Mol BiolChong S
1997Protein Splicing of the Saccharomyces cerevisiae VMA Intein without the Endonuclease Motifs*.J Biol.Chem.Chong, S., and Xu, M.Q.
1997Single-column purification of free recombinant proteins using a self-cleavable affinity tag derived from a protein splicing element.GeneChong, S., Mersha, F.B., Comb, D.G., Scott, M.E., Landry, D., Vence, L.M., Perler, F.B., Benner, J., Kucera, R.B., Hirvonen, C.A., Pelletier, J.J., Paulus, H., and Xu, M.Q.
1998Utilizing the C-terminal cleavage activity of a protein splicing element to purify recombinant proteins in a single chromatographic step.Nucl.Acids Res.Chong, S., Montello, G.E., Zhang, A., Cantor, E.J., Liao, W., Xu, M.-Q.and Benner, J.
1996Protein splicing involving the Saccharomyces cerevisiae VMA intein.The steps in the splicing pathway, side reactions leading to protein cleavage, and establishment of an in vitro splicing system.J.Biol.Chem.Chong, S., Shao, Y., Paulus, H., Benner, J., Perler, F.B., and Xu, M.Q.
1998Modulation of protein splicing of the saccharomyces cerevisiae vacuolar membrane ATPase intein.J.Biol.Chem.Chong, S., Williams, K.S., Wotkowicz, C.and Xu, M.Q.
2003Intein-mediated Protein PurificationMethods and Tools in Biosciences and MedicineChong, S.and Perler, F.B.
2005Harnessing Inteins for Protein Purification and Characterization.Nucleic Acids and Molecular Biology Chong, S.and Xu.M.Q.
1984DNA modification methylases: New uses in the manipulation of DNA.BioTechniquesChrist, C., and Nelson, M.
2015Selective expression of sense and antisense transcripts of the sushi-ichi-related retrotransposon - derived family during mouse placentogenesis.RetrovirologyChristine Henke, Pamela L Strissel, Maria-Theresa Schubert, Megan Mitchell, Claus C Stolt, Florian Faschingbauer, Matthias W Beckmann, Reiner StrickHigh-Fidelity PCR
2017Complete genome sequence of Kluyveromyces lactis strain GG799, a common yeast host for heterologous protein expressionGenome AnnouncementsChuzel, L., Ganatra, M.B., Schermerhorn, K.M., Gardner, A.F., Anton, B.P., Taron, C.H.
2013Targeted delivery of proapoptotic peptides to tumor-associated macrophages improves survivalProc. Natl. Acad. Sci. Cieslewicz, M. et alPhage Display
2005N-Glycans of Caenorhabditis elegans are specific to developmental stagesJ. Biol. Chem. Cipollo, J.F., Awad, A.M., Costello, C.E., Hirschberg, C.B.
2010Lighting up multiprotein complexes: lessons from GPCR oligomerizationTrends Biotechnol Ciruela F. et al.
2012Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencingNucl. Acids Res.Clark, T.A., Murray, I.A., Morgan, R.D., Kislyuk, A.O., Spittle, K.E., Boitano, M., Fomenkov, A., Roberts, R.J. and Korlach, J.
2013Characterization of DNA methyltransferase specificities using single-molecule, real-time DNA sequencingNucleic Acids ResearchClark, T.A., Murray, I.A., Morgan, R.D., Kislyuk, A.O., Spittle, K.E., Boitano, M., Fomenkov, A., Roberts, R.J. and Korlach, J.
2011The MspJI family of modification-dependent restriction endonucleases for epigenetic studiesProc. Natl. Acad. Sci. Cohen-Karni, D, et al.
2011The MspJI family of modification-dependent restriction endonucleases for epigenetic studies.Proc.Natl.Acad.Sci.Cohen-Karni, D., Xu, D., Apone, L., Formenkov, A., Sun, Z., Davis, P.J., Morey Kinney, S.R., Yamada-Mabuchi, M., Xu, S.-y., Davis, T., Pradhan, S.Roberts, R.J., Zheng, Y.
2008Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning.NatureCokus, S.J., Feng, S., Zhang, X., Chen, Z., Merriman, B., Haudenschild, C.D., Pradhan, S., Nelson, S.F., Pellegrini, M.and Jacobsen, S.E.
1990The identification of an Onchocerca-specific recombinant antigen containing a T cell epitope.J Immunol.Colina, K.F., Perler, F.B., Matsumura, I., Meda, M., and Nutman, T.B.
2010Cloning the human vitamin D receptor into the pTwin-1 expression vectorJ Steroid Biochem Mol BiolCollins, E. D., et. al.
2005Kluyveromyces lactis LAC4 promoter variants that lack function in bacteria but retain full function in K. lactisAppl. Environ. Microbiol.Colussi, P.A. and Taron, C.H.
2005Characterization of a nucleus-encoded chitinase from the yeast Kluyveromyces lactisAppl. Environ. Microbiol.Colussi, P.A., Specht, C.A. and Taron, C.H.
2005Characterization of a Nucleus-Encoded Chitinase from the Yeast Kluyveromyces lactis.Appl.Environ.Microbiol.Colussi, P.A., Specht, C.A.and Taron, C.H.
2005Kluyveromyces lactis LAC4 Promoter Variants That Lack Function in Bacteria but Retain Full Function in K.lactis.Appl.Environ.Microbiol.Colussi, P.A.and Taron, C.H.
2015Trans-Pacific RAD-Seq population genomics confirms introgressive hybridization in Eastern Pacific Pocillopora corals.Mol Phylogenet Evol. Combosch DJ, Vollmer SV.
2014PCR amplification of a triple-repeat genetic target directly from whole blood in 15 minutes as a proof-of-principle PCR study for direct sample analysis for a clinically relevant targetBMC Med GenetConnelly CM1, Porter LR2, TerMaat JR
1997Jak1 kinase is required for cell migrations and anterior specification in zebrafish embryos.Proc.Natl.Acad.Sci.USA Conway, G., Margoliath, A., Wong-Madden, S., Roberts, R.J., and Gilbert, W.
1995Photochemically initiated protein splicing.Angew.Chem.Int.Ed.Engl.Cook, S.N., Jack, W.E., Xiong, X., Danley, L.E., Ellman, J.A., Shultz, P.G., and Noren, C.J.
2017DNA target recognition domains in the Type I restriction and modification systems of Staphylococcus aureusNucl. Acids Res.Cooper, L.P., Roberts, G.A., White, J.H., Luyten, Y.A., Bower, E.K., Morgan, R.D., Roberts, R.J., Lindsay, J.A., Dryden, D.T.
2009Fluorescence in living systems: applications in chemical biology Wiley Encyc. of Chem. Biol. Cornish, V. W.
2014Live-cell reporters for fluorescence imagingCurr Opin Chem BiolCorrêa IR Jr.
2011Tuning different expression parameters to achieve soluble recombinant proteins in E. coli: Advantages of high-throughput screeningBiotechnology JournalCorrea, A. and Oppezzo, P.
2015Considerations and protocols for the synthesis of custom protein labeling probesMetholds Mol BiolCorrea, I.R. Jr.
2014Complementation of essential yeast GPI mannosyltransferase mutations suggests a novel specificity for certain Trypanosoma and Plasmodium PigB proteinsPLoS OneCortes, L.K., Scarcelli, J.J., Taron, C.H.
2000Generation of a dual-labeled fluorescence biosensor for Crk-II phosphorylation using solid-phase expressed protein ligationChem. BiolCotton, G.J. and Muir, T.W.
20115-aza-2'-deoxycytidine and interleukin-1 cooperate to regulate matrix metalloproteinase-3 gene expression.Int.J.CancerCouillard, J., Estève, P.O., Pradhan, S.and St-Pierre, Y.
2005Live chemical reports from the cell surfaceChem. Biol. Cravatt B.F.
1991Application of a novel chemiluminescence-based DNA detection method to single-vector and multiplex DNA sequencing.BioTechniquesCreasey, A., D'Angio, L., Dunne, T.S., Kissinger, C., O'Keefe, T., Perry-O'Keefe, H., Moran, L.S., Roskey, M., Schildkraut, I.and Sears, L.E.
2002Dirofilaria immitis encodes Di-nhr-7, a putative orthologue of the Drosophila ecdysone-regulated E78 gene.Mol.Biochem.Parasitol.Crossgrove, K., Laudet, V.and Maina, C.V.
2008Orthologues of the Drosophila melanogaster E75 molting control gene in the filarial parasites Brugia malayi and Dirofilaria immitis.Mol.Biochem.Parasitol.Crossgrove, K., Maina, C.V., Robinson-Rechavi, M.and Lochner, M.C.
2014Cofactor-Independent Phosphoglycerate Mutase from Nematodes Has Limited Druggability, as Revealed by Two High-Throughput ScreensPLoS Negl Trop Dis.Crowther, G.J., Booker, M.L., He, M., Li, T., Raverdy, S., Novelli, J.F., He, P., Dale, N.R.G., Fife, A.M., Barker, R.H., Jr., Kramer, M.L., Van Voorhis, W.C., Carlow, C.K.S. and Wang, M-W.
2016A mix-and-read drop-based in vitro two-hybrid method for screening high-affinity peptide binders.Sci RepCui, N., Zhang, H., Schneider, N., Tao, Y., Asahara, H., Sun, Z., Cai, Y., Koehler, S.A., de Greef, T.F., Abbaspourrad, A., Weitz, D.A. and Chong, S.
1999Purification and crystallization of precursors and autoprocessed enzymes of Flavobacterium glycosylasparaginase: an N-terminal nucleophile hydrolase.Acta Crystallogr.D.Biol.Crystallogr.Cui, T., Liao, P.H., Guan, C.and Guo, H.C.
2014SpeedyGenes: an improved gene synthesis method for the efficient production of error-corrected, synthetic protein libraries for directed evolutionProtein Eng Des SelCurrin A, Swainston N, Day PJ, Kell DB
2013Evaluation of UDP-GlcN Derivatives for Selective Labeling of 5-(Hydroxymethyl)cytosineChembiochemDai N, Bitinaite J, Chin HG, Pradhan S, Corrêa IR Jr.
2002 Towards the generation of artificial O6-alkylguanine-DNA alkyltransferases: in vitro selection of antibodies with reactive cysteine residuesChemBioChem Damoiseaux, R. et al
2003Semisynthesis and application of carboxyfluorescein-labelled biologically active human interleukin-8Biol. Chem.David, R., et al.
2011High sensitivity 4-hydroxymethylcytosine detection in Balb/C brain tissue.J Vis Exp.Davis, T.and Vaisvila, R.
2009Strategies for successful recombinant expression of disulfide bond-dependent proteins in Escherichia coliMicrobial Cell Factoriesde Marco, A.
2011Using a structural and logics systems approach to infer bHLH-DNA binding specificity determinantsNucleic Acids Res. De Masi, F., Grove, C.A., Vedenko, A., Alibés, A., Gisselbrecht, S.S., Serrano, L., Bulyk, M.L. and Walhout, A.J.
2016Complete genome sequence of Brevibacterium linens SMQ-1335.Genome AnnouncementsDe Melo, A., Labrie, S., Dumaresq, J., Roberts, R., Tremblay, D. and Moineau, S.
2009HTRF: A technology tailored for drug discovery - a review of theoretical aspects and recent applications Curr. Chem. Genomics Degorce F. et al.
2010Targeted photoswitchable probe for nanoscopy of biological structures ChemBioChem Dellagiacoma, C. et al.
2006Profluorescent protein fragments for fast bimolecular fluorescence complementation in vitroNat. Protoc.Demidov, V.V., and Broude, N.E.
2015Comparative Population Genomics of African Montane Forest Mammals Support Population Persistence across a Climatic Gradient and Quaternary Climatic Cycles.PLoS One. Demos TC, Kerbis Peterhans JC, Joseph TA, Robinson JD, Agwanda B, Hickerson MJ.
2005Sau421, a Bcgl-like restriction-modification system encoded by the Staphylococcus aureus quadruple-converting phage phi 42MicrobiologyDempsey, R.M., Carroll, D., Kong, H.M., Higgins, L., Keane, C.T., Coleman, D.C.
2017Highly specific imaging of mRNA in single cells by target RNA-initiated rolling circle amplificationChem SciDeng, Ruijie., Zhang, Kaixiang., Sun, Yupeng., Ren, Xiaojun., Li, Jinghong.
2007 Intein-mediated expression is an effective approach in the study of beta-defensinsBiochem Biophys Res CommunDiao, H., et. al.
2016RAD-seq derived genome-wide nuclear markers resolve the phylogeny of tunas.Mol Phylogenet Evol.Díaz-Arce N, Arrizabalaga H, Murua H, Irigoien X, Rodríguez-Ezpeleta N.
2013Genome engineering in Saccharomyces cerevisiae using CRISPR-Cas systemsNucleic Acids ResDiCarlo JE, Norville JE, Mali P, Rios X, Aach J, Church GMGibson Assembly®
2011Genome-wide mapping of the sixth baseGenome Biol. Diep, D. and Zhang, K.
1988Genetic dissection of the methylcytosine-specific restriction system mcrB of Escherichia coli K-12.GeneDila, D., and Raleigh, E.A.
1990Genetic and sequence organization of the mcrBC locus of Escherichia coli K-12.J.Bacteriol.Dila, D., Sutherland, E., Moran, L., Slatko, B., and Raleigh, E.A.
2009A genomescale RNAi screen for Oct4 modulators defines a role of the Paf1 complex for embryonic stem cell identity Cell Stem Cell Ding, L., Paszkowski-Rogacz, M., Nitzsche, A., Slabicki, M.M., Heninger, A.K., de Vries, I., Kittler, R., Junqueira, M., Shevchenko, A., Schulz, H., Hubner, N., Doss, M.X., Sachinidis, A., Hescheler, J., Iacone, R., Anastassiadis, K., Stewart, A.F., Pisabarro, M.T., Caldarelli, A., Poser, I., Theis, M. and Buchholz, F.
2009A genome-scale RNAi screen for Oct4 modulators defines a role of the Pafl complex for embryonic stem cell identity.Cell Stem CellDing, L., Paszkowski-Rogacz, M., Nitzsche, A., Slabicki, M.M., Heninger, A.K., de Vries, I., Kittler, R., Junqueira, M., Shevchenko, A., Schulz, H., Hubner, N., Doss, M.X., Sachinidis, A., Hescheler, J., Iacone, R., Anastassiadis, K., Stewart, A.F., Pisabarro, M.T., Caldarelli. A.. Poser, I., Theis, M. and Buchholz, F
2008Mediator links epigenetic silencing of neuronal gene expression with X-linked mental retardation.Mol.CellDing, N., Zhou, H., Esteve, P.O., Chin, H.G., Kim, S., Xu, X., Joseph, S.M., Friez, M.J., Schwartz, C.E., Pradhan, S.and Boyer, T.G.
2003Crystal structure of a mini-intein reveals a conserved catalytic module involved in side chain cyclization of asparagine during protein splicing.J.Biol.Chem.Ding, Y., Xu, M.-Q., Ghosh, I., Chen, X., Ferrandon, S., Lesage, G., Rao, Z.
1995Differential recognition of microfilarial chitinase, a transmission-blocking vaccine candidate antigen, by sera from patients with Brigian and Bancroftian filariasis.Am.J.Trop.Med.Hyg.Dissanayake, S., Perler, F.B., Xu, M., Southworth, M.W., Yee, C.K., Wang, S., Dreyer, G., Watawana, L., Kurniawan, L., Fuhrman, J.A., and Piessens, W.F.
2006Cofactor-independent Phosphoglycerate Mutase is an essential gene in procyclic form Trypanosoma brucei.Parasitol.Res.Djikeng, A., Raverdy, S., Foster, J., Bartholomeu, D., Zhang, Y., El-Sayed, N.and Carlow, C.
2007Cofactor-independent phosphoglycerate mutase is an essential gene in procyclic form Trypanosoma brucei.J of Biological ChemistryDjikeng, A., Raverdy, S., Foster, J., Bartholomeu, D., Zhang, Y., El-Sayed, N.and Carlow, C.
2016Illuminating uveitis: metagenomic deep sequencing identifies common and rare pathogens.Genome MedicineDoan, T. et al.
2015Clinical Evaluation of a Loop-Mediated Isothermal Amplification (LAMP) Assay for Rapid Detection of Neisseria meningitidis in Cerebrospinal Fluid.PLoS OneDoKyung Lee, Eun Jin Kim, Paul E Kilgore, Soon Ae Kim, Hideyuki Takahashi, Makoto Ohnishi, Dang Duc Anh, Bai Qing Dong, Jung Soo Kim, Jun Tomono, Shigehiko Miyamoto, Tsugunori Notomi, Dong Wook Kim, Mitsuko SekiIsothermal Amplification
2014Consequences of the disease-related L78R mutation for dimerization and activity of STAT3J Cell SciDomoszlai T, Martincuks A, Fahrenkamp D, Schmitz-Van de Leur H, Küster A, Müller-Newen GSNAP Cell, Cellular Analysis
2004Structure of the Q237W mutant of HhaI DNA methyltransferase: An insight into protein-protein interactions.Biol.Chem.Dong, A., Zhou, L., Zhang, X., Stickel, S., Roberts, R.J.and Cheng, X.
2009Characterization and subcellular localization of bacterial flotillin homologueMicrobiology Donovan C. et al.
1994Direct selection of binding proficient/catalytic deficient variants of BamHI endonuclease.Nucl.Acids.Res.Dorner, L.F., and Schildkraut, I.
1999Genetic Analysis of the Base-specific Contacts of BamHI Restriction Endonuclease.J.Mol.Biol.Dorner, L.F., Bitinaite, J., Whitaker, R.D.and Schildkraut, I.
2001The VP1-unique region of parvovirus B19: amino acid variability and antigenic stabilityJ. Gen. Virol. Dorsch, S., et al.
2009Advances in bioluminescence imaging of live animal modelsCurr Opin Biotechnol. Dothager, R., Flentie, K., Moss, B., Pan, M.H., Kesarwala, A. and Piwnica-Worms, D.
2009Advances in bioluminescence imaging of live animal modelsCurr Opin BiotechnolDothager, R., Flentie, K., Moss, B., Pan, M.H., Kesarwala, A., Piwnica-Worms, D.
2016Comprehensive nucelosome mapping of the human genome in cancer progressionOncotargetDruliner, B.R., Vera, D., Johnson, R., Ruan, X., Apone, L.M., Dimalanta, E.T., Stewart, F.J., Boardman, L., Dennis, J.H.
2017Targeted enrichment and sequencing of recent endosymbiont-host lateral gene transfersSci Rep.Dunning Hotopp, J.C., Slatko, B.E., Foster, J.M.
2008The structure of SgrAI bound to DNA; recognition of an 8 base pair target.Nucl.Acids.Res.Dunten, P.W., Little, E.J., Gregory, M.T., Manohar, V.M., Dalton, M., Hough, D., Bitinaite, J., Horton, N.C.
2004In vitro semisynthesis and applications of C-terminally modified Rab proteinsMethods Mol Biol.Durek T., Goody R.S and Alexandrov K.
2004Synthesis of fluorescently labeled mono- and diprenylated Rab7 GTPaseJ. Am. Chem. Soc.Durek, T., et al.
2008Bacterial species exhibit diversity in their mechanisms and capacity for protein disulfide bond formation.Proc Natl Acad Sci Dutton, R.J., Boyd, D., Berkmen, M.and Beckwith, J.
2004Recognition of DNA substrates by T4 polynucleotide kinase.Nucl.Acids Res.Eastberg, J., Pelletier, J.and Stoddard, B.
1997A New Enhancer of Position-Effect Variegation in Drosophila melanogaster Encodes a Putative RNA Helicase That Binds Chromosomes and Is Regulated by the Cell Cycle.Genetics Society of AmericaEberl, D.F., Lorenz, L.J., Melnick, M.B., Sood, V., Lasko, P., and Perrimon, N.
2006Semisynthesis and characterization of mammalian thioredoxin reductaseBiochem.Eckenroth, B., et al.
2011A SNAP-tagged detivative of HIV-1 - A versatile tool to study virus-cell interactionsPLoS One Eckhardt, M. et al.
1997Phosphorylation Of The Casein Kinase II Domain Of B-50 (GAP-43) In Rat Cortical Growth Cones.J.Neurochem.(US) Edgar, M.A., Pasinelli, P., DeWit, M., Anton, B., Dokas, L.A., Pastorino, L., DiLuca, M., Cattabeni, F., Gispen, W.H.and DeGraan, P.N.
1990Antigenic and dynamic properties of the surface of Onchocerca microfilariae.Trop.Med.Parasitol.Edwards, M.K., Busto, P., James, E.R., Carlow, C.K.S., and Philipp, M.
2016Novel Methyltransferase Recognition Motif Identified in Chania multitudinisentens RB-25(T) gen. nov., sp. nov.Front Microbiol Ee, R., Lim, Y.L., Yin, W.F., See-Too, W.S., Roberts, R.J. and Chan, K.G.
2009Direct observation of the nanoscale dynamics of membrane lipids in a living cellNature Eggeling C. et al.
1987N4-Methylcytosine as a minor base in bacterial DNA.J.Bacteriol.Ehrlich, M., Wilson, G.G., Kenneth, C.K., and Gehrke, C.W.
2006The role of single N-glycans in proteolytic processing and cell surface transport of the Lassa virus glycoprotein.GP-C.Virol. J. Eichler, R., Lenz, O., Garten, W., Strecker, T.
2015Dynamic caveolae exclude bulk membrane proteins and are required for sorting of excess glycosphingolipidsNat CommunElena Shvets, Vassilis Bitsikas, Gillian Howard, Carsten Gram Hansen, Benjamin J NicholsSNAP Surface
1998Crystal Structure of the Complex of Brugia Malayi Cyclophilin and Cyclosporin A.BiochemistryEllis, P.J., Carlow, C.K.S., Ma, D.and Kuhn, P.
2000Crystal Structure of the Complex of Brugia Malayi Cyclophilin and Cyclosporin A.Protein Sci.Ellis, P.J., Carlow, C.K.S., Ma, D.and Kuhn, P.
2010Benzylguanine Thiol self-assembled monolayers for the immobilization of SNAP-tag proteins on microcontact-printed surface structuresLangmuir Engin S. et al.
2001The Energetics of the Interaction of BamHI Endonuclease with its Recognition Site GGATCC.J.Mol.Biol.Engler, L.E., Sapienza, P., Dorner, L.F., Kucera, R., Schildkraut, I.and Jen-Jacobson, L.
2013The Xist lncRNA exploits three-dimensional genome architecture to spread across the X chromosomeScienceEngreitz JM, Pandya-Jones A, McDonel P, Shishkin A, Sirokman K, Surka C, Kadri S, Xing J, Goren A, Lander ES, Plath K, and Guttman M
2014 Genome and Metagenome Sequencing: Using the Human Methyl-Binding Domain to Partition Genomic DNA Derived from Plant Tissues. Applications in Plant SciencesErbay Yigit, David I. Hernandez, Joshua T. Trujillo, Eileen Dimalanta, and C. Donovan Bailey
2008Genome-wide analysis reveals a cell cycle-dependent mechanism controling centromere propagationJ. Cell Biol.Erhardt, S. et al.
2006Production and purification of recombinant human glucagons overexpressed as intein fusion protein in Escherichia coliProtein Pept. Lett.Esipov, R.S., et. al.
2015Binding of 14-3-3 reader proteins to phosphorylated DNMT1 facilitatesNucleic Acids ResEstève P., Zhang G., Ponnaluri V., Kanneganti Epigenetics
2014Methyllysine reader plant homeodomain (PHD) finger protein 20-like 1 (PHF20L1) antagonizes DNA (cytosine-5) methyltransferase 1 (DNMT1) proteasomal degradationJ Biol ChemEstève PO, Terragni J, Deepti K, Chin HG, Dai N, Espejo A, Corrêa IR Jr, Bedford MT, Pradhan S
2011A methylation and phosphorylation switch between an adjacent lysine and serine determines human DNMT1 stability.Nat Struct Mol Biol.Estève, P.O., Chang, Y., Samaranayake, M., Upadhyay, A.K., Horton, J.R., Feehery, G.R., Cheng, X.and Pradhan, S.
2009Regulation of DNMT1 Stability through SET7-Mediated Lysine Methylation in Mammalian Cells.Proc.Natl.Acad.Sci.Esteve, P.O., Chin, H.G., Benner, J., Feehery, G.R., Samaranayake, M., Horwitz, G.A., Jacobsen, S.E.and Pradhan, S.
2006Direct interaction between DNMT1 and G9a coordinates DNA and histone methylation during replication.Genes & Devel.Esteve, P.O., Chin, H.G., Smallwood, A., Feehery, G.R., Gangisette, O., Karpf, A.R., Carey, M.F.and Pradhan, S.
2005Human maintenance DNA (cytosine-5)-methyltransferase and p53 modulate expression of p53-repressed promoters.Proc.Natl.Acad.Sci.USAEsteve, P.O., Chin, H.G.and Pradhan, S.
2007Molecular Mechanisms of Transactivation and Doxorubicin-mediated Repression of survivin Gene in Cancer Cells.J of Biological ChemistryEsteve, P.O., Chin, H.G.and Pradhan, S.
2005Functional analysis of the N- and C-terminus of mammalian G9a histone H3 methyltransferase.Nucl.Acids Res.Esteve, P.O., Patnaik, D., Chin, H.G., Benner, J., Teitell, M.A.and Pradhan, S.
2016Binding of 14-3-3 reader proteins to phosphorylated DNMT1 facilitates aberrant DNA methylation and gene expression.Nucleic Acids Res.Esteve, P.O., Zhang, G., Ponnaluri, V.K., Deepti, K., Chin, H.G., Dai, N., Saqum, C., Black, K., Correa, I.R. Jr., Bedford, M.T., Cheng, X. and Pradhan, S.
2009 Sequence-independent and reversible photocontrol of transcription/expression systems using a photosensitive nucleic acid binder Proc. Natl. Acad. Sci.  Estevez-Torres, A., Crozatier, C., Diguet, A., Hara, T., Saito, H., Yoshikawa, K., and Baigl, D.
2016A novel enrichment strategy reveals unprecedented number of novel transcription start sites at single base resolution in a model prokaryote and the gut microbiome.BMC GenomicsEttwiller, L., Buswell, J., Yigit, E. and Schildkraut, I
1995LITMUS: Multipurpose cloning vectors with a novel system for bidirectional in vitro transcription.BioTechniquesEvans, P.D., Cook, S.N., Riggs, P.D., and Noren, C.J.
1998Semisynthesis of cytotoxic proteins using a modified protein splicing element.Protein Sci.Evans, T.C., Benner, J.and Xu, M-Q
1999The Cyclization and Polymerization of Bacterially Expressed Proteins Using Modified Self-splicing Inteins.J.Biol.Chem.Evans, T.C., Benner, J.and Xu, M-Q
1999The in Vitro Ligation of Bacterially Expressed Proteins Using an Intein from Methanobacterium thermoautotrophicum.J.Biol.Chem.Evans, T.C., Benner, J.and Xu, M-Q
2005Protein Splicing Elements and Plants: From Transgene Containment to Protein Purification.Plant Biol.Evans, T.C., Jr., Xu, M.-Q.and Pradhan, S.
2008DNA Repair Enzymes.Curr.Protoc.Mol.Biol.Evans, T.C., Jr.and Nichols, N.M.
2002Mechanistic and kinetic considerations of protein splicing.Chem.Rev.Evans, T.C., Jr.and Xu, M-Q
2000Protein trans-Splicing and Cyclization by a Naturally Split Intein from the dnaE Gene of Synechocystis Species PCC6803.J.Biol.Chem.Evans, T.C., Martin, D., Kolly, R., Panne, D., Sun, L., Ghosh, I., Chen, L., Benner, J., Liu, X-Q and Xu, M-Q
1999Intein-Mediated Protein Ligation: Harnessing Nature's Escape Artists.Biopolymers Evans, T.C.and Xu, M-Q
2005Saccharomyces cerevisiae Ybr004c and its human homologue are required for addition of the second mannose during glycosylphosphatidylinositol precursor assembly.FEBS Journal Fabre, A-L, Orlean, P.and Taron, C.H.
2016Development of a RAD-Seq Based DNA Polymorphism Identification Software, AgroMarker Finder, and Its Application in Rice Marker-Assisted Breeding.PLoS One. Fan W, Zong J, Luo Z, Chen M, Zhao X, Zhang D, Qi Y, Yuan Z.
2012Genome-wide mapping of methylated adenine residues in pathogenic Escherichia coli using single-molecule real-time sequencing. Nat Biotechnol.Fang, G., Munera, D., Friedman, D.I., Mandlik, A., Chao, M.C., Banerjee, O., Feng, Z., Losic, B., Mahajan, M.C., Jabado, O.J., Deikus, G., Clark, T.A., Luong, K., Murray, I.A., Davis, B.M., Keren-Paz, A., Chess, A., Roberts, R.J., Korlach, J., Turner, S.W., Kumar, V., Waldor, M.K. and Schadt, E.E.
2014Structure of the Trehalose-6-phosphate Phosphatase from Brugia malayi Reveals Key Design Principles for Anthelmintic DrugsPLoS PathogFarelli JD, Galvin BD, Li Z, Liu C, Aono M, Garland M, Hallett OE, Causey TB, Ali-Reynolds A, Saltzberg DJ, Carlow CK, Dunaway-Mariano D, Allen KN
2009Membrane proteins follow multiple pathways to the basolateral cell surface in polarized epithelial cellsJ. Cell Biol. Farr G. A. et al.
2001The activity of the murine DNA methyltransferase Dnmt1 is controlled by interaction of the catalytic domain with the N-terminal part of the enzyme leading to an allosteric activation of the enzyme after binding to methylated DNAJ. Mol. Biol.Fatemi, M., Hermann, A., Pradhan, S., Jeltsch, A.
2014Development of VHH Antibodies against Dengue Virus Type 2 NS1 and Comparison with Monoclonal Antibodies for Use in Immunological DiagnosisPLoS OneFatima A, Wang H, Kang K, Xia L, Wang Y, Ye W, Wang J, Wang X.Phage Display
2015Structural and biochemical studies of a moderately thermophilic exonuclease I from Methylocaldum szegediensePLoS OneFei, L., Tian, S., Moysey, R., Misca, M., Barker, J.J., Smith, M.A., McEwan, P.A., Pilka, E.S., Crawley, L., Evans, T. and Sun, D.
2014A robust TALENs system for highly efficient mammalian genome editingSci RepFeng Y, Zhang S, Huang XDNA Assembly and Cloning, Golden Gate Assembly
2010Conservation and divergence of methylation patterning in plants and animalsProc. Natl. Acad. Sci. USA Feng, S., Cokusb, S.J., Zhang, X. et al
2009A new member of the Eschericia coli fad regulon: transcriptional regulation of fadM (ybaW) J. Bacteriol. Feng, Y. and Cronan, J. E.
2009Effect of temperature-shift strategy on recombinat chymosin of Kluyveromyces LactisHeilongjiang Animal Science and Veterinary MedicineFeng, Z., et al
2011Disruption of PMR1 in Kluyveromyces lactis improves secretion of calf prochymosinJ. Sci. Food Agric.Feng, Z., et al.
2011Optimization of Medium Composition for Production of Recombinant Calf Chymosin from Kluyveromyces lactis in Submerged FermentationJ. of Northeast Agricultural UniversityFeng, Z., et al.
2010Codon optimization of the calf prochymosin gene and its expression in Kluyveromyces lactisWorld J. Microbiol. Biotechnol.Feng, Z., et al.
2003A single surface tryptophan in the chitin-binding domain from Bacillus circulans chitinase A1 plays a pivotal role in binding chitin and can be modified to create an elutable affinity tag.Biochim.Biophys.Acta.Ferrandon, S., Sterzenbach, T., Mersha, F.B.and Xu, M-Q
1997Construction and characterization of a radio-iodinatable mutant of recombinant human CD4.J.Immunol.Methods Ferrer, M., Godbout, K., Sullivan, B., Austen, D., Sanderson, C., Kelley, K., Osburne, M., Harrison, S.and van Schravendijk, M.R.
2011Dynamic regulation of 5-hydroxymethylcytosine in mouse ES cells and during differentiationNature Ficz, G., et al.
2010Genome-wide mapping of alternative splicing in Arabidopsis thaliana Genome Res Filichkin, S.A., Priest, H.D., Given, S.A., et al
2013The genetic code constrains yet facilitates Darwinian evolutionNucleic Acids ResFirnberg E, Ostermeier M
2015Two new phragmotic ant species from Africa: morphology and next-generation sequencing solve a caste association problem in the genus Carebara Westwood.Zookeys.Fischer G, Azorsa F, Garcia FH, Mikheyev AS, Economo EP.
2003An aspartate aminotransferase of Wolbachia endobacteria from Onchocerca volvulus is recognized by IgG1 antibodies from residents of endemic areas.Parasitol.Res.Fischer, P., Bonow, I., Buttner, D.W., Kamal, I.H.and Liebau, E.
2016Genomic study of the Ket: a PaleoEskimo-related ethnic group with significant ancient North Eurasian ancestry.Sci Rep.Flegontov, P. et al.
2016Taxonomer: an interactive metagenomics analysis portal for universal pathogen detection and host mRNA expression profilingGenome BiologyFlygare, S. et al.
2009Centromere-specific assembly of CENP-a nucleosomes is mediated by HJURP Cell Foltz D.R. et al.
2017Genome AnnounceGenome Announce.Fomenkov, A., Akimov, V.N., Vasilyeva, L.V., Andersen, D.T., Vincze, T., Roberts, R.J.
1995Cloning of a gene from Thermus filiformis and characterization of the thermostable nuclease.GeneFomenkov, A., and Xu, S.Y.
1995Isolation of temperature-sensitive mutants of the BamHI restriction endonuclease.GeneFomenkov, A., and Xu, S.Y.
2013Molecular dissection of the methylome of Burkholderia cenocepacia J2315FEBS J.Fomenkov, A., Clark, T., Spittle, K., Anton, B.M., Vincze, T., Korlach, J., Roberts, R.J.
2015Complete genome sequence and methylome analysis of bacillus strain x1Genome AnnouncFomenkov, A., Lunnen, K.D., Zhu, Z., Anton, B.P., Wilson, G.G., Vincze, T. and Roberts, R.J.
2017Complete genome sequence and methylome analysis of Acinetobacter calcoaceticus 65Fomenkov, A., Vincze, T., Degtyarev, S.K., Roberts, R.J.
2016Complete Genome Sequence of a Strain of Azospirillum thiophilum Isolated from a Sulfide Spring.Genome Announc.Fomenkov, A., Vincze, T., Grabovich, M., Anton, B.P., Dubinina, G., Orlova, M., Belousova, E. and Roberts, R.J.
2015Complete Genome Sequence of the freshwater colorless sulfur bacterium Beggiatoa leptomitiformis neotype strain D-402TGenome Announc.Fomenkov, A., Vincze, T., Grabovich, M.Y., Dubinina, G., Orlova, M., Belousova, E., Roberts, R.J.
1995Nucleotide sequence of a small plasmid isolated from Acetobacter pasteurianus.GeneFomenkov, A., Xiao, J.P., and Xu, S.Y.
1994The 'endo-blue method' for direct cloning of restriction endonuclease genes in E.coli.Nucl.Acids Res.Fomenkov, A., Xiao, J.P., Dila, D., Raleigh, E., and Xu, S.Y.
1988Isolation and properties of a new site specific endonuclease Bme142I from Bacillus megateriumNucleic Acids Res.Fomenkov, A.I., Kramarov, V.M., Andreev, L.V., Mochalov, V.V., Smolyaninov, V.V., Matvienko, N.I.
2012Clathrin promotes centrosome integrity in early mitosis through stabilization of centrosomal ch-TOG J Cell Bio.Foraker, A.B., Camus, S.M., Evans, T.M., Majeed, S.R., Chen, C.-Y., Taner, S.B., Correa, I.R. Jr., Doxsey, S.J. and Brodsky, F.M.
2008Targeting DNA (5)mCpG sites with chimeric endonucleases.Anal.Biochem.Formenkov, A., Too, P.H., Chan, S.H., Vaisvila, R., Cantin, B.A., Mazzola, L., Tam, V.and Xu, S.Y.
2004The bacterial catalase from filarial DNA preparations derives from common pseudomonad contaminants and not from Wolbachia endosymbionts.Parasitol.Res.Foster, J., Baldo, L., Blaxter, M., Hendle-Duhrsen, K., Whitton, C., Slatko, B.and Bandi, C
2005The Wolbachia Genome of Brugia malayi: Endosymbiont Evolution within a Human Pathogenic Nematode.PLoS Biology Foster, J., Ganatra, M., Kamal, Ibrahim, Ware, J., Makarova, K., Ivanova, N., Bhattacharyya, A., Kapatral, V., Kumar, S., Posfai, J., Vincze, T., Ingram, J., Moran, L., Lapidus, A., Omelchenko, M., Kyrpides, N., Ghedin, E., Wang, S., Goltsman, E., Joukov, V., Ostrovskaya, O., Tsukerman, K., Mazur, M., Comb, D., Koonin, E.and Slatko, B.
2011Recombination in Wolbachia endosymbionts of filarial nematodies?Appl.Environ.Microbiol.Foster, J., Slatko, B., Bandi, C.and Kumar, S.
1999Thermal Asymmetric Interlaced PCR Amplification of YAC Insert End Fragments for Chromosome Walking in Plasmodium falciparum and Other A/T-Rich Genomes.BioTechniquesFoster, J.M., Christodoulou, Z., Cowan, G.M.and Newbold, C.I.
2010Evolution of Bacterial Phosphoglycerate Mutases: Non-homologous Isofunctional Enzymes Undergoing Gene Losses, Gains and Lateral Transfers.PLoS ONEFoster, J.M., Davis, P.J., Raverdy, S., Sibley, M.H., Raleigh, E.A., Kumar, S.and Carlow, C.K.S.
2013The Molecular Biology, Immunology and Chemotherapy of Wolbachia Bacterial Endosymbionts of Filarial NematodesParasitic Namatodes: Molecular Biology, Biochemistry, Immunology Foster, J.M., Hoerauf, A., Slatko, B.E. and Taylor, M.J.
2011"The Molecular Biology, Immunology and chemotherapy of Wolbachia bacterial endosymbionts of filarial nematodes".Parasitic Nematodes: Molecular Biology, Biochemistry & Immunology (Kennedy, M.and Harnett, W., eds.)Foster, J.M., Hoerauf, A., Slatko, B.E.and Taylor, M.J.
2001Hybridization of High-Denisty Filter Arrays of a Brugia malayi BAC Library with Biotinylated Oligonucleotides and PCR Products.BioTechniquesFoster, J.M., Kamal, I.H., Daub, J., Swan, M.C., Ingram, J.R., Ganatra, M., Ware, J., Guiliano, D., Aboobaker, A., Moran, L., Blaxter, M.and Slatko, B.E.
2008Absence of Wolbachia endobacteria in the non-filariid nematodes Angiostrongylus cantonensis and A.costaricensis.Parasites & Vectors Foster, J.M., Kumar, S., Ford, L., Johnston, K.L., Ben, R., Graeff-Teixeira, C.and Taylor, M.J.
2004Construction of BAC libraries from the parasitic nematode Brugia malayi and physical mapping of the genome of its Wolbachia endosymbiont.Int.J.Parasitol.Foster, J.M., Kumar, S., Ganatra, M.B., Kamal, I.H., Ware, J., Ingram, J., Pope-Chappell, J., Guiliano, D., Whitton, C., Daub, J., Blaxter, M.L.and Slatko, B.E.
2014Absense of Wolbachia endobacteria in the human parasitic nematode Dracunculus medinensis and two related Dracunculus species infecting wildlifeParasit VectorsFoster, J.M., Landmann, F., Ford, L., Johnston, K.L., Elsasser, S.C., Schulte-Hostedde, A.I., Taylor, M.J., Slatko, B.E.
2008The Wolbachia endosymbiont of Brugia malayi has an active phosphoglycerate mutase: a candidate target for anti-filarial therapiesParasitol. Res. Foster, J.M., Raverdy, S., Ganatra, M.B., Colussi, P.A., Taron, C.H. and Carlow, C.K.S.
2008The Wolbachia endosymbiont of Brugia malayi has an active phosphoglycerate mutase: a candidate target for anti-filarial therapies.Parasitol.Res.Foster, J.M., Raverdy, S., Ganatra, M.B., Colussi, P.A., Taron, C.H.and Carlow, C.K.S.
2009The Wolbachia endosymbiont of Brugia malayi has an active phosphoglycerate mutase: a candidate target for anti-filarial therapies.Parasitol.Res.Foster, J.M., Raverdy, S., Ganatra, M.B., Colussi, P.A., Taron, C.H.and Carlow, C.K.S.
2005Parasitic nematodes have two distinct chitin synthases.Mol.Biochem.Parasitol.Foster, J.M., Zhang, Y., Kumar, S.and Carlow, C.
2005Mining nematode genome data for novel drug targets.Trends Parasitol.Foster, J.M., Zhang, Y., Kumar, S.and Carlow, C.K.S.
2002Helminth genomics: from gene discovery to genome sequencing.Trends Parasitol Foster, J.M.and Johnston, D.A.
2009Profiling the T-cell receptor beta-chain repertoire by massively parallel sequencingGenome Res. Freeman, J.D., Warren, R.L., Webb, J.R., Nelson, B.H. and Holt, R.A.
2009Tuning microbial hosts for membrane protein productionMicrobial Cell Factories Freigassner, M., Pichler, H. and Glieder, A.
2014Epigenetic silencing of apoptosis-inducing gene expression can be efficiently overcome by combined SAHA and TRAIL treatment in uterine sarcoma cellsPLoS OneFröhlich LF, Mrakovcic M, Smole C, Lahiri P, Zatloukal K
2016Increasing Genome Sampling and Improving SNP Genotyping for Genotyping-by-Sequencing with New Combinations of Restriction Enzymes G3Fu YB, Peterson G. W., Dong YRestriction Enzyme Digestion, Restriction Enzyme Digestion
2015Bias in ligation-based small RNA sequencing library construction is determined by adaptor and RNA structurePLoS OneFuchs, R.T., Sun, Z., Zhuang, F., et al.RNA Analysis
1992Transmission-blocking antibodies recognize microfilarial chitinase in brugian lymphatic filariasis.Proc.Natl.Acad.Sci.USAFuhrman, J.A., Lane, W.S., Smith, R.F., Piessens, W.F., and Perler, F.B.
2008The relative contribution of mannose salvage pathways to glycosylation in PMI-deficient mouse embryonic fibroblast cellsFEBS J.  Fujita, N., Tamura, A., Higashidani, A., Tonozuka, T., Freeze, H.H., Nishikawa, A.
2008Diffusion and directed movement: in vitro motile properties of fission yeast kinesin-14 Plk1 J. Biol. Chem.  Fururta, K. et al.
2013RNA-Methylation-Dependent RNA Processing Controls the Speed of the Circadian ClockCellFustin, J.-M. et al.
2015Kinetic pathway of 40S ribosomal subunit recruitment to hepatitis C virus internal ribosome entry siteProc Natl Acad Sci U S AGabriele Fuchs, Alexey N Petrov, Caleb D Marceau, Lauren M Popov, Jin Chen, Sen E O'Leary, Richard Wang, Jan E Carette, Peter Sarnow, Joseph D PuglisiSNAP Cell, SNAP Surface
2014Insights into bacterial CO2 metabolism revealed by the characterization of four carbonic anhydrases in Ralstonia eutropha H16AMB ExpressGai CS, Lu J, Brigham CJ, Bernardi AC, Sinskey AJGibson Assembly®
2002Structure of a tRNA Repair Enzyme and Molecular Biology Workhorse: T4 Polynucleotide Kinase.StructureGalburt, E.A., Pelletier, J., Wilson, G.and Stoddard, B.L.
2014A Target Repurposing Approach Identifies N-myristoyltransferase as a New Candidate Drug Target in Filarial NematodesPLoS Negl Trop Dis.Galvin, B.D., Li, Z., Villemaine, E., Poole, C.B., Chapman, M.S., Pollastri, M.P., Wyatt, P.G., Carlow, C.K.
2015Restriction Site-Associated DNA Sequencing (RAD-seq) Reveals an Extraordinary Number of Transitions among Gecko Sex-Determining Systems.Mol Biol Evol. Gamble T, Coryell J, Ezaz T, Lynch J, Scantlebury DP, Zarkower D.
2011A set of aspartyl protease-deficient strains for improved expression of heterologous proteins in Kluyveromyces lactisFEMS Yeast Res.Ganatra, M.B., Rainauskas, S., Hong J.M., Taylor, T.E., Denson, J.P.M., Esposito, D., Read, J.D., Schmeisser, H., Zoon, K.C., Hartley, J.L. and Taron, C.H.
2011A set of aspartyl protease-deficient strains for improved expression of heterologous proteins in Kluyveromyces lactisFEMS Yeast Res.Ganatra, M.B., Rainauskas, S., Hong, J.M., Taylor, T.E., Denson, J.P.M., Esposito, D., Read, J.D., Schmeisser, H., Zoon, K.C., Hartley, J.L. and Taron, C.H.
2010A set of aspartyl protease-deficient strains for improved expression of heterologous proteins in Kluyveromyces lactis.FEMS Yeast Res.Ganatra, M.B., Vainauskus, S., Hong, J.M., Taylor, T.E., Denson, J.P., Esposito, D., Read, J.D., Schmeisser, H., Zoon, K.C., Hartley, J.L.and Taron, C.H.
2011A set of aspartyl protease-deficient strains for improved expression of heterologous proteins in Kluyveromyces lactis.FEMS Yeast Res.Ganatra, M.B., Vainauskus, S., Hong, J.M., Taylor, T.E., Denson, J.P., Esposito, D., Read, J.D., Schmeisser, H., Zoon, K.C., Hartley, J.L.and Taron, C.H.
2013Single-stranded DNA library preparation for the sequencing of ancient or damaged DNANat. Protoc.Gansauge MT, Meyer M.
2014Protein-protein interactions leading to the recruitment of the host DNA sliding clamp by the hyperthermophilic archaeal virus SIRV2J VirolGardner AF, Bell SD, White MF, Prangishvili D, Krupovic M
2014DNA polymerases in biotechnologyFront Microbiol.Gardner, A.F. and Kelman, Z.
2015DNA polymerases in biotechnologyFront Microbiol.Gardner, A.F. and Kelman, Z.
2011Biochemical Characterization of a Structure-Specific Resolving Enzyme from Sulfolobus Islandicus Rod-Shaped Virus 2.PLoS ONEGardner, A.F., Guan, C.and Jack, W.E.
2004Comparative Kinetics of Nucleotide Analog Incorporation by Vent DNA Polymerase.J.Biol.Chem.Gardner, A.F., Joyce, C.M.and Jack, W.E.
2012Genome Sequence of the Model Hyperthermophilic Archaeon Thermococcus litoralis NS-CJ Bacteriol.Gardner, A.F., Kumar, S. and Perler, F.B.
2011Characterization of Sulfolobus islandicus rod-shaped virus 2 gp19, a single-strand specific endonuclease.ExtremophilesGardner, A.F., Prangishvili, D.and Jack.W.E.
2012Rapid incorporation kinetics and improved fidelity of a novel class of 3'-OH unblocked reversible terminatorsNucleic Acids Res.Gardner, A.F., Wang, J., Wu, W., Karouby, J., Li, H., Stupi, B.P., Jack, W.E., Hersh, M.N. and Metzker, M.L.
1999Determinants of nucleotide sugar recognition in an archaeon DNA polymerase.Nuc.Acids Res.Gardner, A.F.and Jack, W.E.
2002Acyclic and dideoxy teminator preferences denote divergent sugar recognition by archaeon and Taq DNA polymerases.Nuc.Acids Res.Gardner, A.F.and Jack, W.E.
1995Identification of recombinant filarial proteins capable of inducing polyclonal and antigen-specific IgE and IgG4 antibodies.J.Immunol.Garraud, O., Nkenfou, C., Bradley, J.E., Perler, F.B., and Nutman, T.B.
1997Induction of Parasite Antigen-Specific Antibody Responses in Unsensitized Human B Cells is Dependent on the Presence of Cytokines After T Cell Priming.J.Immunol.Garraud, O., Perler, F.B., Bradley, J.E., and Nutman, T.B.
2013Prokaryotic super program advisory committee DOE Joint Genome Institute, Walnut Creek, CA, March 27, 2013Stand Genomic ScienceGarrity, G.M. Banfield, J., Eisen, J., van der Lelie, N., McMahon, T., Rusch, D., Delong, E., Moran, M.A., Currie, C., Fuhrman, J., Hallam, S., Hugenholtz, P., Moran, N., Nelson, K., Roberts, R., Stepanauskas, R.
2008AGT/SNAP-Tag: A versatile tag for covalent protein labeling from probes and tags to study biomolecular function Ed. Edited by Miller, L. W. Gautier A. et al.
2008An engineered protein tag for multiprotein labeling in living cellsChemistry & Biology Gautier A. et al.
2009Selective cross-linking of interacting proteins using self-labeling tagsJ. Am. Chem. Soc. Gautier A. et al.
1996Immunoglobulin G Subclass Responses of Children during Infection with Onchocerca volvulus.Clinical and Diagnostic Laboratory ImmunologyGbakima, A.A., Nutman, T.B., Bradley, J.E., McReynolds, L.A., Winget, M.D., Hong, Y., and Scott, A.L.
2005Self-cleavable stimulus responsive tags for protein purification without chromatographyJ. Am. Chem. SocGe, X., et. al.
2009Comparison of distinct protein isoforms of the receptor for advanced glycation end-products expressed in murine tissues and cell linesCell Tissue Res. Gefter, J.V., Shaufl, A.L., Fink, M.P., Delude, R.L. Glycobiology
2010Triplet imaging of oxygen consumption during the contraction of a single smooth muscle cellBiophys. J. Geissbuehler M. et al.
2003Covalent labeling of fusion proteins with chemical probes in living cellsChimia Gendreizig S. et al.
2003Induced protein dimerizaton in vivo through covalent labelingJACS Gendreizig, S. et al.
2008Photobleaching-free infrared near-field microscopy localizes molecules in neuronsJ. App. Phys. Generosi J. et al.
2008AMPA receptor imaging by infrared scanning near-field optical microscopyPhysica Status Solidi C: Current Topics in Solid State Physics Generosi J. et al.
2012Targeted genome enrichment for efficient purification of endosymbiont DNA from host DNASymbiosisGeniez, S., Foster, J.M., Kumar, S., Moumen, B., Leproust, E., Hardy, O., Guadalupe, M., Thomas, S.J., Boone, B., Hendrickson, C., Bouchon, D., Greve, P and Slatko, B.E.
2012Restriction Enzymes in Microbiology, Biotechnology and BiochemistryEncuentroGeoffrey G. Wilson, Hua Wang, Daniel F. Heiter, Keith D. Lunnen
2004Specific labeling of cell surface proteins with chemically diverse compoundsJ .Am. Chem. Soc.  George N. et al.
2013A Method for Selectively Enriching Microbial DNA from Contaminating Vertebrate Host DNAPLOS ONEGeorge R. Feehery, Erbay Yigit, Samuel O. Oyola, Bradley W. Langhorst, Victor T. Schmidt, Fiona J. Stewart, Eileen T. Dimalanta, Linda A. Amaral-Zettler, Theodore Davis, Michael A. Quail, Sriharsa Pradhan
2007Draft Genome of the Filarial Parasite Brugia malayi.ScienceGhedin E, Wang S, Spiro D, Caler E, Zhao Q, Crabtree J, Allen JE, Delcher AL, Guiliano DB, Miranda-Saavedra D, Angiuoli SV, Creasy T, Amedeo P, Haas B, El-Sayed NM, Wortman JR, Feldblyum T, Tallon L, Schatz M, Shumway M, Koo H, Salzberg SL, Schobel S, Pertea M, Pop M, White O, Barton GJ, Carlow CK, Crawford MJ, Daub J, Dimmic MW, Estes CF, Foster JM, Ganatra M, Gregory WF, Johnson NM, Jin J, Komuniecki R, Korf I, Kumar S, Laney S, Li BW, Li W, Lindblom TH, Lustigman S, Ma D, Maina CV, Martin DM, McCarter JP, McReynolds L, Mitreva M, Nutman TB, Parkinson J, Peregrín-Alvarez JM, Poole C, Ren Q, Saunders L, Sluder AE, Smith K, Stanke M, Unnasch TR, Ware J, Wei AD, Weil G, Williams DJ, Zhang Y, Williams SA, Fraser-Liggett C, Slatko B, Blaxter ML, Scott AL.
2008The symbiotic relationship between filarial parasitic nematodes and their wolbachia endosymbionts - a resource for a new generation of control measures.SymbiosisGhedin, E., Daehnel, K., Foster, J., Slatko, B.and Lustigman S.
2004First sequenced genome of a parasitic nematode.Trends Parasitol.Ghedin, E., Wang, S., Foster, J.and Slatko, B.
2011Site-specific protein labeling by intein-mediated protein ligation.Methods Mol.Biol.Ghosh, I., Considine, N., Maunus, E., Sun, L., Zhang, A., Buswell, J., Evans, T.C.Jr.and Xu, M.Q.
2004An improved method for utilization of peptide substrates for antibody characterization and enzymatic assays.J.Immunol.Methods Ghosh, I., Sun, L., Evans, T.C.Jr.and Xu, M.Q.
2001Zinc Inhibition of Protein trans-Splicing and Identification of Regions Essential for Splicing and Association of a Split Intein.J.Biol.Chem.Ghosh, I., Sun, L.and Xu, M.Q.
1981Two new restriction endonucleases from Proteus vulgaris.Nucl.Acids Res.Gingeras, T.R., Greenough, L., Schildkraut, I., and Roberts, R.J.
2013Two new restriction endonucleases from Proteus vulgaris.Nucl.Acids Res.Gingeras, T.R., Greenough, L., Schildkraut, I., and Roberts, R.J.
1999Regulation of 4E-BP1 phosphorylation: a novel two-step mechanism.Genes & Devel.Gingras, A-C., Gygi, S.P., Raught, B., Polakiewicz, R.D., Abraham, R.T., Hoekstra, M.F., Aebersold, R.and Sonenberg, N.
2015VirB6 and VirB10 from the Brucella type IV secretion system interact via the N-terminal periplasmic domain of VirB6FEBS LettGiraldo A.MV., Mary C., Sivanesan D., Baron C.
2001Protein splicing and its aplications.Genet.Eng.(NY) Giriat, I., Muir, T.W.and Perler, F.B.
2005Site-specific immobilization of proteins in a microarray using intein-mediated protein splicingBioorg. Med. Chem. Lett.Girish, A., et al.
2004Expression and function of conserved nuclear receptor genes in Caenorhabditis elegans.Dev.Biol.Gissendanner, C.R., Crossgrove, K., Kraus, K.A., Maina, C.V.and Sluder, A.E.
2008The Caenorhabditis elegans NR4A nuclear receptor is required for spermatheca morphogenesis.Dev.Biol.Gissendanner, C.R., Kelley, K., Nguyen, T.Q., Hoener, M.C., Sluder, A.E.and Maina, C.V.
2010Repositioning of an existing drug for the neglected tropical disease Onchocerciasis.Proc.Natl.Acad.Sci.USAGloeckner, C., Garner, A.L., Mersha, F., Oksov, Y., Tricoche, N., Eubanks, L.M., Lustigman, S., Kaufmann, G.F.and Janda, K.D.
2015Comparative Analysis of the Glycosylation Profiles of Membrane-Anchored HIV-1 Envelope Glycoprotein Trimers and Soluble gp140.J VirolGo E.P., Herschhorn A., Gu C., Castillo-Menendez L., Zhang S., Mao Y., Chen H., Ding H., Wakefield J.K., Hua D., Liao H.X., Kappes J.C., Sodroski J., Desaire H.
2007 Cell-free metabolic engineering promotes high-level production of bioactive Gaussia princeps luciferase J. Biotechnol. Goerke, A.R. and Loening, A.M., Gambhir, S.S. and Swartz, J.R.
2009Characterization of N-linked glycosylation on recombinant glycoproteins produced in Pichia pastoris using ESI-MS and MALDI-TOFMethods Mol. Biol. Gong, B., Cukan, M., Fisher, R., Li, H., Stadheim, T.A., Gerngross, T. Glycobiology
2012Near-infrared fluorescence imaging of mammalian cells and xenograft tumors with SNAP-tagPLoS ONEGong, H. wt al.
Near-Infrared Fluorescence Imaging of Mammalian Cells and Xenograft Tumors with SNAP-tagPLoS ONEGong, H.; Kovar, J. L.; Baker, B.; Zhang, A.; Cheung, L.; Draney, D. R.; Corrêa, I. R., Jr.; Xu, M.-Q.; Olive, M. D.
2011Targeting choroid plexus epithelia and ventricular ependyma for drug delivery to the central nervous systemBMC NeurosciGonzalez, A.M. et al.Phage Display
2005Yersinia pestis outer membrane type III secretion protein YscC: expression, purification, characterization, and induction of specific antiserumProtein Expr. Purif. Goodin, J. L., et al.
2014Comparison of Subtypes of Listeria monocytogenes Isolates from Naturally Contaminated Watershed Samples with and without a Selective Secondary EnrichmentPLoS ONEGorski L, Walker S, Liang AS, Nguyen KM, Govoni J, et al.
2006Intein-mediated in vitro synthesis of lipidated Ras proteinsChem. Commun. (Camb)Gottlieb, D., et al.
2005Measurement of the contributions of 1-D and 3-D pathways to the translocation of a protein along DNA.Proc.Natl.Acad.Sci.USAGowers, D.M., Wilson, G.G.and Halford, S.
2008Two-dimensional gel-based approaches for the assessment of N-Linked and O-GlcNAc glycosylation in human and simian immunodeficiency virusesProteomicsGraham, D.R., Mitsak, M.J., Elliott, S.T., Chen, D., Whelan, S.A., Hart, G.W., Van Eyk, J.E. Glycobiology
2016Epidemiological typing of Neisseria gonorrhoeae and detection of markers associated with antimicrobial resistance directly from urine samples using next generation sequencingSex. Transm. InfectGraham, R.M.A. et al.
2009Neuroprotective secreted amyloid precursor protein acts by disrupting amyloid precursor protein dimersJ. Biol. Chem. Gralle M. et al.
1989A l gt11 cDNA recombinant that encodes Dirofilaria immitis paramyosin.Mol.Biochem.Parasitol.Grandea, A.G.I., Le, T.K.T., Asikin, N., Davis, T.B., Philipp, M., Cohen, C., and McReynolds, L.A.
2009 Functional interactions between Mldp (LSDP5) and Abhd5 in the control of intracellular lipid accumulation.Biol. ChemGranneman, J.G., Moore, H.P., Mottillo, E.P. and Zhu, Z.
2009Functional interactions between Mldp (LSDP5) and Abhd5 in the control of intracellular lipid accumulation Biol. Chem. Granneman, J.G., Moore, H.P., Mottillo, E.P. and Zhu, Z.J.
2006The N terminus of GTP gamma S-activated transducin alpha-subunit interacts with the C terminus of the cGMP phosphodiesterase gammasubunitJ. Biol. Chem. Grant, J., et al.
2012Antiproliferative small-molecule inhibitors of transcription factor LSF reveal oncogene addiction to LSF in hepatocellular carcinomaProc Natl Acad Sci. USAGrant, T.J., Bishop, J.A., Christadore, L.M., Barot, G., Chin, H.G., Woodson, S., Kavouris, J., Siddiq, A., Gredler, R., Shen, X.N., Sherman, J., Meehan, T., Fitzgerald, K., Pradhan, S., Briggs, L.A., Andrews, W.H., Sarkar, D., Schaus, S.E. and Hansen, U.
2012Antiproliferative small-molecule inhibitors of transcription factor LSF reveal oncogene addiction to LSF in hepatocellular carcinomaProc. Natl. Acad. Sci. USAGrant, T.J., et al.
2016AnnoTALE: bioinformatics tools for identification, annotation, and nomenclature of TALEs from Xanthomonas genomic sequences.Sci Rep.Grau, J., Reschke, M., Erkes, A., Streubel, J., Morgan, R.D., Wilson, G.G., Koebnik, R. and Boch, J.
2006Analysis of one million base pairs of Neanderthal DNANature Green, R.E., Krause, J., Ptak, S.E., Briggs, A.W., Ronan, M.T., Simons, J.F., Du, L., Egholm, M., Rothberg, J.M., Paunovic, M. and Pääbo, S.
2014Characterization of Family D DNA polymerase from Thermococcus sp. 9°NExtremophilesGreenough L, Menin JF, Desai NS, Kelman Z, Gardner AF
2015The foles of family B and d DNA polymerases in thermococcus species 9 degrees n okazaki fragment maturationJ Biol ChemGreenough, L., Kelman, Z. and Gardner, A.F.
2015The roles of family B and d DNA polymerases in thermococcus species 9 degrees n okazaki fragment maturationJ Biol Chem.Greenough, L., Kelman, Z. and Gardner, A.F.
2015Adapting capillary gel electrophoresis as a senisitive, high-throughput method to accelerate characterization of nucleic acid metabolic enzymesNucleic Acids ResGreenough, L., Schermerhorn K.M., Mazzola, L., Bybee, J., Rivizzigno, D., Cantin, E., Slatko, B.E., Gardner, A.F.
2016Adapting capillary gel electrophoresis as a sensitive, high-throughput method to accelerate characterization of nucleic acid metabolic enzymesNucleic Acids Res.Greenough, L., Schermerhorn, K.M., Mazzola, L., Bybee, J., Rivizzigno, D., Cantin, E., Slatko, B.E., Gardner, A.F.
2014Efficient DNA ligation in DNA–RNA hybrid helices by Chlorella virus DNA ligaseNucleic Acids ResearchGregory J. S. Lohman, Yinhua Zhang, Alexander M. Zhelkovsky, Eric J. Cantor, Thomas C. Evans Jr.
2010Vascular-Targeting Anti-Oxidant Therapy in a Model of Hypertension and StrokeJ. Cardiovasc. PharmacolGreig, J.A. et al.
2004Deficiencies in the essential Smp3 mannosyltransferase block glycosylphosphatidylinositol assembly and lead to defects in growth and cell wall biogenesis in Candida albicans.Microbiology Grimme, S.J., Colussi, P.A., Taron,C.H.and Orlean, P.
2014A trimeric lipoprotein assists in trimeric autotransporter biogenesis in enterobacteriaJ Biol ChemGrin I, Hartmann MD, Sauer G, Hernandez Alvarez B, Schütz M, Wagner S, Madlung J, Macek B, Felipe-Lopez A, Hensel M, Lupas A, Linke DPhage Display
2003Cytosine methylation by the SuaI restriction-modification system: implications for genetic fidelity in a hyperthermophilic archaeon.J.Bacteriol.Grogan, D.W.
2006Adding value to fusion proteins through covalent labeling Curr. Opin. Biotechn. Gronemeyer T. et al.
2006Directed evolution of O6-alkylguanine-DNA alkyltransferase for applications in protein labelingProt. Eng. Des. Sel. Gronemeyer T. et al.
2011A Radically Different Mechanism for S-Adenosylmethionine-Dependent Methyltransferases.Science ExpressGrove, T.L., Benner, J.S., Radle, M.I., Ahlum, J.H., Landgraf, B.J., Krebs, C.and Booker, S.J.
2004Cloning of the thermostable alpha-amylase gene from Pyrococcus woesei in Escherichia coli: isolation and some properties of the enzymeMol. Biotechnol. Grzybowska, B., Szweda, P. and Synowiecki, J.
2012Detection of miRNAs with a nanopore single-molecule counterExpert Rev. Mol. Diagn.Gu, L.Q., et al.
2012Detection of miRNAs with a nanopore single-molecule counterExpert Rev Mol Diagn.Gu, L.Q., Wanunu, M., Wang, M.X., McReynolds, L. and Wang, Y.
1996Activation of glycosylasparaginase.Formation of Active N-Terminal Threonine by Intramolecular Autoproteolysis.J.Biol.Chem.Guan, C., Cui, T., Rao, V., Liao, W., Benner, J., Lin, C.L., and Comb, D.
2004Changing the Enzymatic Activity of T7 Endonuclease by Mutations at the Beta-Bridge Site: Alteration of Substrate Specificity Profile and Metal Ion Requirements by Mutation Distant from the Catalytic Domain.BiochemistryGuan, C., Kumar, S., Kucera, R.and Ewel, A.
1998Characterization and functional analysis of the cis-autoproteolysis active center of glycosylasparaginase.J.Biol.Chem.Guan, C., Liu, Y., Shao, Y., Cui, T., Liao, W., Ewel, A., Whitaker, R.and Paulus, H.
1983Analysis of Regulation of phoB Expression Using a phoB-cat Fusion.J.Bacteriol.Guan, C., Wanner, B., and Inouye, H.
2005A single catalytic domain of the junction-resolving enzyme T7 endonuclease I is a non-specific nicking endonuclease.Nucl.Acids Res.Guan, C.and Kumar, S.
1988Vectors that facilitate the expression and purification of foreign peptides in Escherichia coli by fusion to maltose-binding protein.GeneGuan, C.D., Li, P., Riggs, P.D., and Inouye, H.
2010Alteration of Sequence Specificity of the Type IIS Restriction Endonuclease BtsIPLoS ONEGuan, S., Blanchard, A., Zhang, P.and Zhu, Z.
1999Chemiluminescent Detection of Sequential DNA Hybridizations to High-Density, Filter-Arrayed cDNA Libraries: A Subtraction Method for Novel Gene Discovery.BioTechniquesGuiliano, D., Ganatra, M., Ware, J., Parrot, J., Daub, J., Moran, L., Brennecke, H., Foster, J.M., Supali, T., Blaxter, M., Scott, A.L., Williams, S.A.and Slatko, B.E.
2014Fusion of catalytically inactive Cas9 to FokI nuclease improves the specificity of genome modificationNat BiotechnolGuilinger JP, Thompson DB, Liu DRGibson Assembly®
2015Population genomic evidence for adaptive differentiation in Baltic Sea three-spined sticklebacks.BMCBiol.Guo B, DeFaveri J, Sotelo G, Nair A, Merilä J.
2004Intein-mediated fusion expression, high efficient refolding, and one-step purification of gelonin toxinProtein Expr Purif.Guo, C., et al.
2011Potent Anti-Tumor Effect Generated by a Novel Human Papilllomavirus (HPV) Antagonist Peptide Reactivating the pRb/E2F PathwayPLoS OneGuo, C.P. et al.
2004Intein-mediated fusion expression, high efficient refolding, and one-step purification of gelonin toxin.Protein Expr.Purif.Guo, C.Y., Li, Z., Xu, M.Q., Wise, J.G., Trommer, W.E.and Yuan, J.
2005Preparation of an immunoadsorbent coupled with a recombinant antigen to remove anti-acetylcholine receptor antibodies in abnormal serum.J.Immunol.MethodsGuo, C.Y., Li, Z.Y., Xu, M.Q.and Yuan, J.M.
1998Crystal Structures of Flavobacterium Glycosylasparaginase.J.Biol.Chem.Guo, H.-C., Xu, Q., Buckley, D.and Guan, C.
2011Characterization of MspNI (G/GWCC) and MspNII (R/GATCY), novel thermostable Type II restriction endonucleases from Meiothermus sp., isoschizomers of AvaII and BstYIMol Biol Rep.Gupta, R., Xu, S.Y., Sharma, P. and Capalash, N.
2012Characterization of MspNI (G/GWCC) and MspNII (R/GATCY), novel thermostable Type II restriction endonucleases from Meiothermus sp., isoschizomers of AvaII and BstYIMol Biol Rep.Gupta, R., Xu, S.Y., Sharma, P. and Capalash, N.
2015Structural basis of asymmetric DNA methylation and ATP-triggered long-range diffusion by EcoP15INature CommunicationsGupta, Y.K., Chan, S.H., Xu, S.Y., and Aggarwal, A.K.
2012Structural insights into the assembly and shape of Type III restriction-modification (R-M) EcoP15I complex by small-angle X-ray scattering J Mol biol. Gupta, Y.K., Yang, L., Chan, S.H., Samuelson, J.C., Xu, S.-Y. and Aggarwal, A.K.
2016Using glycosidases to remove, trim, or modify glycans on therapeutic proteinsBioProcess InternationalGuthrie, E.P., Magneilli, P.E.
1996Cloning, expression and sequence analysis of the SphI restriction-modification system.GeneGuthrie, E.P., Quinton-Jager, T., Moran, L.S., Slatko, B.E., Kucera, R.B., Benner, J.S., Wilson, G.G., and Brooks, J.E.
2014Engineering nicking enzymes that preferentially nick 5-methylcytosine-modified DNANucleic Acids ResGutjahr A, Xu SYGibson Assembly®
2013Ribosome profiling provides evidence that large noncoding RNAs do not encode proteinsCellGuttman M, Russell P, Ingolia NT, Weissman JS, Lander ES
2013Rapid, modular and reliable construction of complex mammalian gene circuitsNucleic Acids ResGuye P, Li Y, Wroblewska L, Duportet X, Weiss RGibson Assembly®
2016Metagenomic analysis of bloodstream infections in patients with acute leukemia and therapy induced neutropenia.Sci Rep.Gyarmati, P. et al.
2006Expression of N-terminal Cys-protein fragments using an intein refolding strategyBioorg. Med. Chem.Hackenberger, C. P., et. al.
2006Deglycosylation of the beta1-subunit of the BK channel changes its biophysical propertiesAm. J. Physiol.Cell. Physiol.  Hagen, B.M., Sanders, K.M.
2010Radiation-guided drug delivery to mouse models of lung cancerClin. Cancer Res.Hairiri, G. et al.
2002Creation of an Artificial Bifunctional Intein by Grafting a Homing Endonuclease into a Mini-intein.J.Mol.Biol.Hall, M.F., Noren, C., Perler, F.and Schildkraut, I.
2014Functional characterization improves associations between rare non-synonymous variants in CHRNB4 and smoking behaviorPLoS OneHaller G, Li P, Esch C, Hsu S, Goate AM, Steinbach JHGlycobiology
2006RecJ exonuclease: substrates, products and interaction with SSB.NARHan, E.S., Cooper, D.L., Persky, N.S., Sutera, V.A.Jr., Whitaker, R.D., Montello, M.L.and Lovett, S.T.
2015Recognition and cleavage of 5-methylcytosine DNA by bacterial SRA-HNH proteinsNucleic Acids Res.Han, T., Yamada-Mabuchi, M., Zhao, G., Li, L., Liu, G., Oui, H-Y, Deng, Z., Zheng, Y. and He, X.
2011YaeJ is a novel ribosome-associated protein inEscherichia coli that can hydrolyze peptidyl-tRNA on stalled ribosomes Nucleic Acids Res.  Handa, Y., Inaho, N. and Nameki, N.
2011Chemical Modification of Proteins in Living CellsMethods in Protein ChemistryHanek, A.; Corrêa, I. R., Jr.
2001In vitro assembly of phytochrome B apoprotein with synthetic analogs of the phytochrome chromophoreProc. Natl. Acad. Sci. USA Hanzawa, H., et al.
2015Insulin-like factor regulates neural induction through an IGF1 receptor-independent mechanism.Sci RepHaramoto Y., Takahashi S., Oshima T., Onuma Y., Ito Y., Asashima M.
2015Sul1 and Sul2 Sulfate Transceptors Signal to Protein Kinase A upon Exit of Sulfur Starvation.J Biol ChemHarish Nag Kankipati, Marta Rubio-Texeira, Dries Castermans, George Diallinas, Johan M TheveleinHigh-Fidelity PCR
2014Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequenceGenes DevHashimoto H, Olanrewaju YO, Zheng Y, Wilson GG, Zhang X, Cheng X
2015Structure of Naegleria Tet-like dioxygenase (NgTet1) in complexes with a reaction intermediate 5-hydroxymethylcytosine DNA.Nucleic Acids ResHashimoto H, Pais JE, Dai N, Corrêa IR Jr, Zhang X, Zheng Y, Cheng X.
2014Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNANatureHashimoto H, Pais JE, Zhang X, Saleh L, Fu ZQ, Dai N, Corrêa IR Jr, Zheng Y, Cheng X
2013Structure of a Naegleria Tet-like dioxygenase in complex with 5-methylcytosine DNANatureHashimoto, H., Pais, J.E., Zhang, X., Saleh, L., Qing Fu, Z., Dai, N., Correa, I.R. Jr., Zheng, Y. and Cheng X.
2016Denys-Drash syndrome associated WT1 glutamine 369 mutants have altered sequence-preferences and altered responses to epigenetic modifications.Nucleic Acids Res.Hashimoto, H., Zhang, X., Zheng, Y., Wilson, G.G. and Cheng, X.
2007A sensitive fluorescence intensity assay for deubiquitinating proteases using ubiquitin-rhodamine110-glycine as substrateAnal Biochem.Hassiepen, U., et. al.
2007Expressed protein ligation using an N-terminal cysteine containing fragment generated in vivo from a pelB fusion proteinProtein Expr. Purif.Hauser, P. S., et al.
2015Expression and purification of single-chain Type IV restriction enzyme Eco94GmrSD and determination of it substrate preferenceScientific ReportsHe, X., Hull, V., Thomas, J.A., Fu, X., Gidwani, S., Gupta, Y.K., Black, L.W. and Xu, S-Y.
2010A functional NR4A nuclear receptor DNA-binding domain is required for organ development in Caenorhabditis elegans.GenesisHeard, M., Maina, C.V., Morehead, B.E., Hoener, M.C., Nguyen, T.Q., Williams, C.C., Rowan, B.G.and Gissendanner, C.R.
2017Defining the RNaseH2 enzyme-initiated ribonucleotide excision repair pathway in ArchaeaJ. Biol Chem.Heider, M.R., Burkhart, B.W., Santangelo, T.J., Gardner, A.F.
2010Stimulated emission depletion nanoscopy of living cells using SNAP-Tag fusion proteinsBiophys. J.  Hein B. et al.
2009The apearance of pyrrolysine in tRNAHis guanylyltransferase by neutral evolution.Proc.Natl.Acad.Sci.USAHeinemann, I.U., O'donoghue, P., Madinger, C., Benner, J., Randau, L., Noren, C.J.and Soll, D.
2006Evolving the substrate specificity of O6 alkylguanine DNA alkyltransferase through loop insertion for applications in molecular imagingACS Chem Biol. Heinis C. et al.
2005Site-specific DNA-nicking mutants of the heterodimeric restriction endonuclease R.BbvCI.J.Mol.Biol.Heiter, D.F., Lunnen, K.D.and Wilson, G.G.
2004Specific and covalent targeting of conjugating and deconjugating enzymes of ubiquitin-like proteinsMol. Cell Biol.Hemelaar, J.et al.
2011TrbB from conjugative plasmid F is a structurally distinct disulfide isomerase that requires DsbD for redox state maintenance.J BacteriolHemmis, C.W., Berkmen, M., Eser, M.and Schildbach, J.F.
2010The de novo cytosine methyltransferase DRM2 requires intact UBA domains and a catalytically mutated paralog DRM3 during RNA-directed DNA methylation in Arabidopsis thalianaPLoS Genet.Henderson, I.R., Deleris, A., Wong, W., Zhong, X.H., Chin, H.G., Horwitz, G.A., Kelly, K.A., Pradhan, S., Jacobsen, S.E.
1989Introduction of prokaryotic HhaI DNA methyltransferase alters the phenotype of 3T3 cells.Proc.Am.Assoc.Cancer Res.Herman, J., Nelkin, B., Mabry, M., Wilson, G., and Baylin, S.
2015Evolutionary and biogeographical patterns of barnacles from deep-sea hydrothermal vents.Mol Ecol.Herrera S, Watanabe H, Shank TM.
2007Mutant torsinA interferes with protein processing through the secretory pathway in DYT1 dystonia cells Proc. Natl. Acad. Sci. USA Hewett, J.W., Tannous, B., Niland, B.P., Nery, F.C., Zeng, J., Li, Y. and Breakefield, X.O.
2007Mutant torsinA interferes with protein processing through the secretory pathway in DYT1 dystonia cells. Proc. Natl. Acad. Sci. USA.Hewett, J.W., Tannous, B., Niland. B.P., Nery, F.C., Zeng, J., Li, Y. and Breakefield, X.
2013A Protocol for Construction of Gene Targeting Vectors and Generation of Homologous Recombinant Embryonic Stem CellsMethods in Molecular BiologyHicham Bouabe, Klaus Okkenhaug
2016The Microbiome of Aseptically Collected Human Breast Tissue in Benign and Malignant DiseaseSci Rep.Hieken, T.J. et al.
2001The nicking endonuclease N.BstNBI is closely related to Type IIs restriction endonucleases MlyI and PleI.Nucl.Acids Res.Higgins, L.S., Besnier, C.and Kong H.
2009A chemical genetic method for generating bivalent inhibitors of protein kinasesJ. Am. Chem. Soc. Hill Z. B.
2008A comparative study of protein synthesis in in vitro systems: from the prokaryotic reconstituted to the eukaryotic extract-based.BMC Biotechnol.Hillebrecht, J.R.and Chong, S.
2003Kinetic analysis of the coordinated interaction of SgrAI restriction endonuclease with different DNA targets.J.Biol.Chem.Hingorani, K.and Bitinaite, J.
1997Crystallization and Preliminary X-ray Analysis of Restriction Endonuclease FokI Bound to DNA.FEBS Lett.Hirsch, J.A., Wah, D.A., Dorner, L.F., Schildkraut, I., Aggarwal, A.K.
2000Identification of the Metal-Binding Sites of Restriction Endonucleases by Fe2+-Mediated Oxidative Cleavage.Biochemistry Hlavaty, J.J., Benner, J.S., Hornstra, L.J.and Schildkraut, I.
2012Functional importance of Dicer protein in the adaptive cellular response to hypoxiaJ. Biol. Chem.Ho, J.J., et al.
2012Functional importance of Dicer protein in the adaptive cellular response to hypoxiaJ biol Chem.Ho, J.J., Metcalf, J.L., Yan, M.S., Turgeon, P.J., Wang, J.J., chalsev, M., Petruzziello-Pellegrini, T.N., Tsui, A.K., He, J.Z., Dhamko, H., Man, H.S., Robb, G.B., Teh, B.,T., Ohh, M. and Marsden, P.A.
2013Active stabilization of human endothelial nitric oxide synthase mRNA by hnRNP E1 protects against antisense RNA and microRNAsMol Cell BiolHo, J.J., Robb, G.B., Tai, S.C., Turgeon, P.J., Mawji, I.A., Man, H.S. and Marsden, P.A.
1992Protein splicing removes intervening sequences in an archaea DNA polymerase.Nucl.Acids Res.Hodges, R.A., Perler, F.B., Noren, C.J., and Jack, W.E.
2013Complete Genome Sequence of a Multidrug-Resistant Salmonella enterica Serovar Typhimurium var. 5- Strain Isolated from Chicken BreastGenome AnnouncHoffmann M, Muruvanda T, Allard MW, Korlach J, Roberts RJ, Timme R, Payne J, McDermott PF, Evans P, Meng J, Brown EW, Zhao S
2015Complete Genome Sequence of Salmonella enterica subsp. enterica Serovar Agona 460004 2-1, Associated with a Multistate Outbreak in the United StatesGenome AnnouncHoffmann M, Payne J, Roberts RJ, Allard MW, Brown EW, Pettengill JB
2014Complete genome sequence of a multidrug resistant Salmonella enterica serovar Typhimurium var. 5-strain isolated from chicken breastGenome Announc.Hoffmann, M., Muruvanda, T., Allard, M.W., Korlach, J., Roberts, R.J., Timme, R., Payne, J., McDermott, P.F., Evans, P., Meng, J., Brown, E.W., Zhao, S.
2015A lipid switch unlocks Parkinson's disease-associated ATP13A2Proc Natl Acad Sci U S AHolemans T., Sørensen DM., Veen S., Martin S., Hermans D., Kemmer GC., Haute C., Baekelandt V., Pomorski TG., Agostinis P., Wuytack F., Palmgren M., Eggermont J., Vangheluwe P.
2009Computational Prediction of Essential Genes in an Unculturable Endosymbiotic Bacterium, Wolbachia of Brugia malayi.BMC Microbiol.Holman, A.G., Davis, P.J., Foster, J.M., Carlow, C.K.S.and Kumar, S.
2009Using chemical approaches to study selenoproteins-Focus on thioredoxin reductasesBiochim. Biophys. Acta.Hondal, R. J.
2003A fluorescence resonance energy transfer sensor for the beta-domain of metallothioneinProc. Natl. Acad. Sci. USAHong, S.H., and Maret, W.
1998A highly conserved large molecular weight cyclophilin of filarial parasites.Exp.Parasitol.Hong, X., Ma, D., Page, A.P., Kumar, S.and Carlow, C.K.S.
1998Cloning, expression and characterization of a new filarial cyclophilin.Mol.Biochem.Parasitol.Hong, X., Ma, D.and Carlow, C.K.S.
1996Cloning and Expression of DiT33 from Dirofilaria-Immitis - a Specific and Early Marker of Heartworm Infection.ParasitologyHong, X.Q., Mejia, J.S., Kumar, S., Perler, F.B., and Carlow, C.K.S.
1995A Promising Recombinant Antigen for the Early Detection of Heartworm Infection.Proceeding of the Heartworm SymposiumHong, X.Q., Mejia, J.S., Nkenfou, C., Perler, F.B., and Carlow, C.K.
2014Validation of microinjection methods for generating knockout mice by CRISPR/Cas-mediated genome engineeringSci RepHorii T, Arai Y, Yamazaki M, Morita S, Kimura M, Itoh M, Abe Y, Hatada IGibson Assembly®
2014Structure of 5-hydroxymethylcytosine-specific restriction enzyme AbaSI in complex with DNANucleic Acids ResHorton JR, Borgaro JG, Griggs RM, Quimby A, Guan S, Zhang X, Wilson GG, Zheng Y, Zhu Z, Cheng X
2014Structure and mutagenesis of the DNA modification-dependent restriction endonuclease AspBHISci RepHorton JR, Nugent RL, Li A, Mabuchi MY, Fomenkov A, Cohen-Karni D, Griggs RM, Zhang X, Wilson GG, Zheng Y, Xu SY, Cheng X
1998How is modification of the DNA substrate recognized by the PvuII restriction endonuclease?Biol. Chem.Horton, J.R., Bonventre, J. and Cheng, X.
2012Stucture and cleavage activity of the tetrameric MspJI DNA modification-dependent restriction endonuclease.Nucleic Acids ResearchHorton, J.R., Mabuchi, M., Cohen-Karni, D., Zhang, X., Griggs, R., Samaranayake, M., Roberts, R.J., Zheng, Y. and Cheng, X.
1998Asp34 of PvuII Endonuclease is Directly Involved in DNA Minor Groove Recognition and Indirectly Involved in Catalysis.J.Mol.Biol.Horton, J.R., Nastri, H.G., Riggs, P.D.and Cheng, X.
2014Modification-dependent restriction endonuclease, MspJI, flips 5-methylcytosine out of the DNA helixNucleic Acids ResearchHorton, J.R., Wang, H., Mabuchi, M.Y., Zhang, X., Roberts, R.J., Zheng, Y., Wilson, G.G., Cheng, X
2006DNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion.Nucl.Acids.Res.Horton, J.R., Zhang, X., Maunus, R., Yang, Z., Wilson, G.G., Roberts, R.J.and Cheng, X.
1999Crystallization and preliminary diffractin analysis of the HincII restriction endonuclease-DNA complex.Acta Crystallogr.D.Biol.Crystallogr.Horton, N.C, Dorner, L.F., Schildkraut, I.and Perona J.J.
2014Strand Invasion Based Amplification (SIBA®): A Novel Isothermal DNA Amplification Technology Demonstrating High Specificity and Sensitivity for a Single Molecule of Target AnalytePLoS OneHoser MJ, Mansukoski HK, Morrical SW, Eboigbodin KE
2011Ordered and dynamic assembly of single spliceoseomsScience Hoskins, A. et al.
2007Widespread lateral gene transfer from intracellular bacteria to multicellular eukaryotes.ScienceHotopp, J.C., Clark, M.E., Oliveira, D.C., Foster, J.M., Fischer, P., Torres, M.C., Giebel, J.D., Kumar, N., Ishmael, N., Wang, S., Ingram, J., Nene, R.V., Shepard, J., Tomkins, J., Richards, S., Spiro, D.J., Ghedin, E., Slatko, B., Tettelin, H.and Werren, J.H.
2015Thousands of RAD-seq Loci Fully Resolve the Phylogeny of the Highly Disjunct Arctic-Alpine Genus Diapensia (Diapensiaceae).PLoS One. Hou Y, Nowak MD, Mirré V, Bjorå CS, Brochmann C, Popp M.
2016RAD-seq data point to a northern origin of the arctic-alpine genus Cassiope (Ericaceae).Mol Phylogenet Evol. Hou Y, Nowak MD, Mirré V, Bjorå CS, Brochmann C, Popp M.
1992Using Molecular Biological Techniques to Identify and Study Gene Products Involved in Dirofilarial Immunoprophylaxis.American Heartworm SocietyHough, D.M., Awobuluyi, M.E., McReynolds, L.A., Carlow, C.K.S., and Maina, C.V.
1986Cloning the DdeI restriction-modification system using a two-step method.Nucl.Acids Res.Howard, K.A., Card, C., Benner, J.S., Callahan, H.L., Maunus, R., Silber, K., Wilson, G., and Brooks, J.E.
2008 Inducing efficient cross-priming using antigen-coated yeast particlesJ. Immunother.Howland S.W. et al.
2013Protein engineering: single or multiple site-directed mutagenesis Methods Mol Biol. Hsieh, P.C. and Vaisvila, R.
2000Cloning, Expression and Purification of a Thermostable Nonhomodimeric Restriction Enzyme, BslIJ.Bacteriol.Hsieh, P.-C., Xiao, J.-P., O'Loane, D.and Xu, S.-Y.
2013Efficient and specific gene knockdown by small interfering RNAs produced in bacteriaNat Biotechnol.Huang, L., Jin, J., Deighan, P., Liner, E., McReynolds, L. and Lieberman, J.
2013Characterization of human plasma-derived exosomal RNAs by deep sequencingBMC GenomicsHuang, X. et al.
2004SPR-based interaction studies with small molecular weight ligands using hAGT fusion proteinsAnal. Biochem. Huber W. et al.
2012Marine genome resource sustainability in Central AmericaElectronic Journal of BiotechnologyHuete-Perez, J.A., Roberts, R.J. and Quezada, F.
2014Analysis of hundreds of cis-regulatory landscapes at high resolution in a single, high-throughput experimentNat GenetHughes J.R., Roberts N., McGowan S., Hay D., Giannoulatou E., Lynch M., De Gobbi M., Taylor S., Gibbons R., Higgs D.R.Epigenetics, Restriction Enzymes for Epigenetics, DNA Methylation Analysis
2002Expression of the class 1 outer-membrane protein of Neisseria meningitidis in Escherichia coli and purification using a self-cleavable affinity tagProtein Expr. Purif. Humphries, H. E., Christodoulides, M. and Heckels, J. E.
2011Kinetic study of de novo chromophore maturation of fluorescent proteinsAnal. Biochem. Iizuka, R., Yamagishi-Shirasaki, M. and Funatsu, T.
2014Molecular evolution of the Yap/Yorkie proto-oncogene and elucidation of its core transcriptional programMol Biol EvolIkmi A, Gaertner B, Seidel C, Srivastava M, Zeitlinger J, Gibson MCGibson Assembly®
2014Molecular evolution of the Yap/Yorkie proto-oncogene and elucidation of its core transcriptional programMol Biol EvolIkmi A, Gaertner B, Seidel C, Srivastava M, Zeitlinger J, Gibson MCGibson Assembly®
2005A versatile system for the expression of nonmodified bacteriocins inEscherichia coliJ. Appl. Microbiol. Ingham, A.B., et al.
2008Identification of two catalytic domains in a luciferase secreted by the copepod Gaussia princepsBiochem Biophys Res Commun. Inouye, S. and Sahara, Y.
2013Extensively duplicated and transcriptionally active recent lateral gene transfer from a bacterial Wolbachia endosymbiont to its host filarial nematode Brugia malayiBMC GenomicsIonnidis, P., Johnston, K.L., Riley, D.R., Kumar, N., White, J.R., Olarte, K.T., Ott, S., Tallon, L.J., Foster, J.M., Taylor, M.J. and Dunning-Hotopp, J.C.
2011Cleavage of a model DNA replication fork by a methyl-specific endonuclease.Nucl.Acids.Res.Ishikawa, K., Handa, N.Sears, L., Raleigh, E.A.and Kobayashi, I.
2014The uric acid transporter SLC2A9 is a direct target gene of the tumor suppressor p53 contributing to antioxidant defenseOncogeneItahana Y, Han R, Barbier S, Lei Z, Rozen S, Itahana KGlycobiology
2013Substrates for Improved Live-Cell Fluorescence Labeling of SNAP-tagCurrent Pharmaceutical DesignIvan R. Corrêa Jr, Brenda Baker, Aihua Zhang, Luo Sun, Christopher R. Provost, Grazvydas Lukinavicius, Luc Reymond, Kai Johnsson, and Ming-Qun Xu
2008Templated protein assembly on micro-contact-printed surface patterns. Use of the SNAP-tag protein functionality LangumuirIversen L. et al.
1992Regulation of the BamHI restriction-modification system by a small intergenic open reading frame, bamHIC, in both Escherichia coli and Bacillus subtilis.J.Bacteriol.Ives, C.L., Nathan, P.D., and Brooks, J.E.
1995The regulatory C proteins from different restriction-modification systems can cross-complement.J.Bacteriol.Ives, C.L., Sohail, A., and Brooks, J.E.
1991Overexpression, purification and crystallization of BamHI endonuclease.Nucl.Acids Res.Jack, W.E., Greenough, L., Dorner, L.F., Xu, S.Y., Strzelecka, T., Aggarwal, A.K., and Schildkraut, I.
2006Visualizing receptor trafficking in livingPNAS Jacquier V. et al.
2013The Formin Daam1 and Fascin Directly Collaborate to Promote Filopodia FormationCurrent Biology Jaiswal, R., Breitsprecher, D., Collins, A., Correa, I.R., Jr., Xu, M.-Q. and Goode, B.L.
2014Massively parallel single-cell RNA-seq for marker-free decomposition of tissues into cell types.ScienceJaitin, DA., Kenigsberg, E., Keren-Shaul, H., Elefant, N., Paul, F., Zaretsky, I., Mildner, A., Cohen, N., Jung, S., Tanay, A. and Amit, I.
1994Molecular Cloning of an Onchocerca volvulus Extracellular Cu-Zn Superoxide Dismutase.Infect.Immun.James, E.R., McLean, D.C.J., and Perler, F.B.
2014Stable cell surface expression of GPI-anchored proteins, but not intracellular transport, depends on their fatty acid structureTrafficJanesh, N. Correa, I.R., Jr. and Watanabe, R.
2012In vitro Transcription and Capping of Gaussia Luciferase mRNA Followed by HeLa Cell TransfectionJ. Vis. Exp. Jani, B. and Fuchs, R.
2007Propagation of centromeric chromatin requires exit from mitosis J. of Cell Bio. Jansen L. et al
2010Engineering of a synthetic electron conduit in living cellsProc. Natl. Acad. Sci. USAJensen, H.M., et al.
2014RNA-RNA Interactions Enable Specific Targeting of Noncoding RNAs to Nascent Pre-mRNAs and Chromatin SitesCellJesse M. Engreitz, Klara Sirokman, Patrick McDonel, Alexander A. Shishkin, Christine Surka, Pamela Russell, Sharon R. Grossman, Amy Y. Chow, Mitchell Guttman, and Eric S. Lander
2016Comparison of intraspecific, interspecific and intergeneric chloroplast diversity in Cycads.Sci Rep.Jiang, G.F. et al.
2008Branched Activation- and Catalysis-Specific Pathways for Electron Relay to the Manganese/Iron Cofactor in Ribonucleotide Reductase from Chlamydia trachomatis.BiochemistryJiang, W., Saleh, L., Barr, E.W., Xie, J., Gardner, M.M., Krebs, C.and Bollinger, J.M.Jr.
2014p19-mediated enrichment and detection of siRNAsMethods Mol BiolJin J, McReynolds LA, Gullerova M
2014Mediated enrichment of siRNAsMethods in Molecular BiologyJin J., McReynolds L.A. and Gullerova M.
2010Protein mediated miRNA detection and siRNA enichment using p19.BioTechniquesJin, J., Cid, M., Poole, C.B.and McReynolds, L.A.
1999Alternative splicing creates sex-specific transcripts and truncated forms of the furin protease in the parasite Dirofilaria immitis.GeneJin, J., Poole, C.B., Slatko, B.E.and McReynolds, L.A.
2016Sensitive and specific miRNA detection method using SplintR LigasePublication.Nucleic Acids Res.Jin, J., Vaud, S., Zhelkovsky, A.M., Posfai, J. and McReynolds, L.A.
2016Complete Genome Sequence of Escherichia coli ER1821R, a Laboratory K-12 Derivative Engineered To Be Deficient in All Methylcytosine and Methyladenine Restriction SystemsGenome Announc.Jobling, M.G., Raleigh, E.A. and Frank, D.N.
2016Derivative Engineered To Be Deficient in All Methylcytosine and Methyladenine Restriction Systems.Genome Announc.Jobling, M.G., Raleigh, E.A. and Frank, D.N.
2008SNAP-tag Technologies: Novel tools to study protein functionNEB Expressions Johnson K.
2007Solution Structure of a KlbA Intein Precursor from Methanococcus jannaschii.Protein Sci.Johnson, M., Southworth, M., Herrmann, T., Brace, L., Perler, F.and Wuthrich, K.
2007NMR assignment of a KlbA intein precursor from Methanococcus jannaschii.Biomol NMR Johnson, M., Southworth, M.Perler, F.and Wuthrich, K.
2009Visualizing biochemical activities in living cellsNat Chem Biol Johnsson K.
2003A fusion of disciplines: chemical approaches to exploit fusion proteins for functional genomicsChembiochem Johnsson N. and Johnsson K.
2007Chemical tools for biomolecular imagingACS Chem. Biol. Johnsson N. and Johnsson K.
2005Protein chemistry on the surface of living cells Chembiochem. Johnsson N. et al.
1999Genomics and the biology of parasites.BioEssaysJohnston, D.A., Blaxter, M.L., Degrave, W.M., Foster, J., Ivens, A.C.and Melville, S.E.
2010Massively parallel sequencing of exons on the X chromosome identifies RBM10 as the gene that causes a syndromic form of cleft palate Am. J. Hum. Genet. Johnston, J.J., Teer, J.K., Cherukuri, P.F. et al
2010Lipoprotein biosynthesis as a target for anti-Wolbachia treatment of filarial nematodes.Johnston, K.L., Wu, B., Guimaraes, A., Ford, L.Slatko, B.E.and Taylor, M.J.
2010Frequent mutations of chromatin remodeling gene ARID1A in ovarian clear cell carcinomaScience  Jones, S., Wang, T.-L., Shih, Ie-M., et al
2006 Self-assembling protein arrays on DNA chips by auto-labeling fusion proteins with a single DNA address Proteomics Jongsma M.A., Litjens R. H.
2006Alteration of sequence specificity of the type II restriction endonuclease HincII through an indirect readout mechanism.J Biol Chem.Joshi, H.K., Etzkorn, C., Chatwell, L., Bitinaite, J.and Horton, N.C.
1995Orphon spliced-leader sequences form part of a repetitive element in Angiostrongylus cantonensis.Nucl.Acids Res.Joshua, G.W., Perler, F.B., and Wang, C.C.
2003Directed evolution of O6-alkylguanine-DNA alkyltransferase for efficient labeling of fusion proteins with small molecules in vivoChem. Biol.  Juillerat A. et al.
2005Engineering substrate specificity of O6-alkylguanine-DNA alkyltransferase for specific protein labeling in living cellsChemBioChem Juillerat A. et al.
2013The complex methylome of the human gastric pathogen Helicobacter pyloriNucleic Acids ResearchJuliane Krebes, Richard D. Morgan, Boyke Bunk, Cathrin Spröer, Khai Luong, Raphael Parusel, Brian P. Anton, Christoph König, Christine Josenhans, Jörg Overmann, Richard J. Roberts, Jonas Korlach, Sebastian Suerbaum
2015Involvement of the heterodimeric interface region of the nucleotide binding domain-2 (NBD2) in the CFTR quaternary structure and membrane stabilityBiochim Biophys ActaJulien M., Chauvet S., Scheckenbach KE., Alfaidy N., Chanson M., Benharouga M.
2015CRL4RBBP7 is required for efficient CENP-A deposition at centromeresJ Cell SciJulien Mouysset, Samuel Gilberto, Michelle G Meier, Fabienne Lampert, Mukta Belwal, Patrick Meraldi, Matthias PeterSNAP Cell
2015An alternative pluripotent state confers interspecies chimaeric competency.NatureJun Wu, Daiji Okamura, Mo Li, Keiichiro Suzuki, Chongyuan Luo, Li Ma, Yupeng He, Zhongwei Li, Chris Benner, Isao Tamura, Marie N Krause, Joseph R Nery, Tingting Du, Zhuzhu Zhang, Tomoaki Hishida, Yuta Takahashi, Emi Aizawa, Na Young Kim, Jeronimo Lajara, Pedro Guillen, Josep M Campistol, Concepcion Rodriguez Esteban, Pablo J Ross, Alan Saghatelian, Bing Ren, Joseph R Ecker, Juan Carlos Izpisua BelmonteHigh-Fidelity PCR
2010Artificial neural network study on organ-targeting peptidesJ. Comput. Aided. Mol. Des. Jung, E. et al.
2016Phytochromes function as thermosensors in Arabidopsis.ScienceJung, J-H. et al.
2015Dissecting the molecular properties of prokaryotic flotillinsPLoS OneJuri Nio Bach, Marc BramkampSNAP Surface, SNAP Cell
2009A genetically encoded bioluminescent indicator for the sodium channel activity in living cellsJ. Am. Chem. Soc. Kaihara, A., Sunami, A., Kurokawa, J. and Furukawa, T.
2009A genetically encoded bioluminescent indicator for the sodium channel activity in living cellsJ. Am. Chem. Soc.Kaihara, A., Sunami, A., Kurokawa, J., Furukawa, T.
2006Real-time observation of trigger factor function on translating ribosomesNatureKaiser, C.M., Chang, H.C., Agashe, V.R., Lakshmipathy, S.K., Etchells, S.A., Hayer-Hartl, M., Hartl, F.U. and Barral, J.M.
2006Reactivity of intein thioesters: appending a functional group to a proteinChembiochem.Kalia, J., et al.
2001Characterization of glycosylated variants of beta-lactoglobulin expressed in Pichia pastorisProtein Eng. Kalidas, C., Joshi, L., Batt, C.
2010Localizable and Highly Sensitive Calcium Indicator Based on a BODIPY Fluorophore Anal. Chem. Kamiya M. and Johnsson K.
2010Rapid optical imaging of EGF receptor expression with a single-chain antibody SNAP-tag fusion proteinEur. J. Med. Mol. Imaging Kampmeier, F. et al.
2013Massively parallel characterization of restriction endonucleasesScopusKamps-Hughes, N., Quimby, A., Zhu, Z., Johnson, E.A.
2016A Genetic Map for the Only Self-Fertilizing Vertebrate.G3 (Bethesda)Kanamori A, Sugita Y, Yuasa Y, Suzuki T, Kawamura K, Uno Y, Kamimura K, Matsuda Y, Wilson CA, Amores A, Postlethwait JH, Suga K, Sakakura Y.
2011Identification of targeting peptides for ischemic myocardium by in vivo phage displayJ. Mol. Cell. Cardiol. Kanki, S. et al.
2009Site-Specific, covalent labeling of recombinant antibody fragments via fusion to an engineered version of 6-O-alkylguanine DNA alkyltransferaseBioconjug Chem. Kapmeier F. et al.
An insight into the various regulatory mechanisms modulating human DNA methyltransferase 1 stability and functionEpigeneticsKar, S., Deb, M., Sengupta, D. Shilpi, A., Parbin, S., Torrisani, J., Pradhan, S. and Patra, S.
2015Rescue of cells from apoptosis increases DNA repair in UVB exposed cells: implications for the DNA damage responseToxicol. Res.Karbaschi, Mahsa., Macip, Salvador., Mistry, Vilas., Abbas, Hussein H.K., Delinassios, George J., Evans, Mark D., Young, Antony R., Cooke, Marcus S.
2007Authentic interdomain communication in an RNA helicase reconstituted by expressed protein ligation of two helicase domainsFEBS J. Karow, A., et al.
2010Analysis of p300/CBP histone acetyltransferase regulation using circular permutation and semisynthesisJ. Am. Chem. Soc. Karukurichi, K. et al.
2015Environmental marine pathogen isolation using mesocosm culture of sharpsnout seabream: striking genomic and morphological features of novel Endozoicomonas sp.Sci Rep.Katharios, P. et al.
2014DevR (DosR) mimetic peptides impair transcriptional regulation and survival of Mycobacterium tuberculosis under hypoxia by inhibiting the autokinase activity of DevS sensor kinaseBMC MicrobiolKaur K, Taneja NK, Dhingra S, Tyagi JSPhage Display
2016Incipient sympatric speciation in Midas cichlid fish from the youngest and one of the smallest crater lakes in Nicaragua due to differential use of the benthic and limnetic habitats?Ecol Evol.Kautt AF, Machado-Schiaffino G, Torres-Dowdall J, Meyer A.
2008Comprehensive Analysis of the Effects of Eschericia coli ORF's on Protein Translation Reaction Molecular & Cellular Proteomics Kazuta, Y., Adachi, J., Matsuura, T., Ono, N., Mori, H. and Yomo T.
2014Production of Disulfide-Bonded Proteins in Escherichia coliCurr Protoc Mol BiolKe N, Berkmen M
2016Visualization of Periplasmic and Cytoplasmic Proteins with a Self-Labeling Protein Tag.J BacteriolKe, N., Landgraf, D., Paulsson, J. and Berkmen, M.
1991A Novel Activity in Escherichia coli K-12 That Directs Restriction of DNA Modified at CG Dinucleotides.J.Bacteriol.Kelleher, J.E., and Raleigh, E.A.
1994Response to UV Damage by Four Escherichia coli K-12 Restriction Systems.J.Bacteriol.Kelleher, J.E., and Raleigh, E.A.
1995On the regulation and diversity of restriction in Esherichia coli.GeneKelleher, J.E., and Raleigh, E.A.
2002Gene therapy: reality or myth for the global bleeding disorders community?HaemophiliaKelley, K., Verma, I.and Pierce, G.F.
1995Regulation of sCD4-183 gene expression from phage-T7-based vectors in Escherichia coli.GeneKelley, K.C., Huestis, K.J., Austen, D.A., Sanderson, C.T., Donoghue, M.A., Stickel, S.., Kawasaki, E.S., and Osburne, M.S.
2008Targeted nanoparticles for imaging incipient pancreatic ductal adenocarcinomaPLoS Med.Kelly, K.A. et al.
2015Linkage disequilibrium network analysis (LDna) gives a global view of chromosomal inversions, local adaptation and geographic structure.Mol Ecol Resour. Kemppainen P, Knight CG, Sarma DK, Hlaing T, Prakash A, Maung Maung YN, Somboon P, Mahanta J, Walton C.
2010Chromatin particle spectrum analysis: a method for comparative chromatin structure analysis using paired-end mode next-generation DNA sequencing Nucleic Acids Research Kent, N.A., Adams, S., Moorhouse, A., and Paszkiewicz, K.
2003A general method for the covalent labeling of fusion proteins with small molecules in vivoNature Biotechnology Keppler A. et al.
2004Labeling of fusion proteins with synthetic fluorophores in live cellsPNAS Keppler A. et al.
2006Fluorophores for live cell imaging of AGT fusion proteins across the visible spectrumBioTechniques Keppler A. et al.
2009Chromophore-assisted laser inactivation of α- and γ-tubulin SNAP-tag fusion proteins inside living cellsACS Chem. Biol. Keppler A. et al.
2004Labeling of fusion proteins of O6-alkylguanine-DNA alkyltransferase with small molecules in vitro and in vivoMethods Keppler A. et al.
2016Absence of the filarial endosymbiont Wolbachia in seal heartworm (Acanthocheilonema spirocauda) but evidence of ancient lateral gene transfer.J Parasitol.Keroack, C.D., Wurster, J.I., Decker, C.G., Williams, K.M., Slatko, B.E., Foster, J.M. and Williams, S.A.
2007Single M13 bacteriophage tethering and stretching.Proc.Natl.Acad.Sci.USAKhalil, A.S., Ferrer, J.M., Brau, r.R., Kottmann, S.T., Noren, C.J., Lang, M.J.and Belcher, A.M.
2015GADD45a physically and functionally interacts with TET1PublicationDifferentiationKienhöfer S., Musheev M., Stapf U., Helm M., Schomacher L., Niehrs C., Schäfer A.Epigenetics
2008Epigenetic mechanisms in mammals.Cell Mol.Life Sci.Kim JK, Samaranayake M, Pradhan S.
2002Co-operation and communication between the human maintenance and de novo DNA (cytosine-5) methyltransferases.EMBO J.Kim, G.D., Ni, J., Kelesoglu, N., Roberts, R.J.and Pradhan, S.
2009UHRF1 binds G9a and participates in p21 transcriptional regulation in mammalian cells.Nucl.Acids.Res.Kim, J.K., Estève, P.O., Jacobsen, S.E.and Pradhan, S.
2009Epigenetic mechanisms in mammalsCell Mol Life SciKim, J.K., Samaranayake, M., Pradhan, S
2011A peptide to dimerized translationally controlled tumor protein modulates allergic reactionsJ. Mol. Med.Kim, M.
2003Covalent and selective immobilization of fusion proteinsJACS Kindermann M. et al.
2004Synthesis and characterization of bifunctional probes for the specific labeling of fusion proteinsBioorg. Med. Chem. Lett. Kindermann M. et al.
2015Novel recA-Independent Horizontal Gene Transfer in Escherichia coli K-12PLoSKingston AW, Roussel-Rossin C, Dupont C, Raleigh EA.
2015Novel recA-Independent Horizontal Gene Transfer in Escherichia coli K-12PloS OneKingston, A. W., Roussel-Rossin, C., Dupont, C., Raleigh, E. A.
2017Rpn (YhgA-Like) Proteins of Escherichia coli K-12 and their Contribution to Rec-A-Independent Horizontal TransferJ. BacteriolKingston, A.W., Ponkratz, C. and Raleigh, E.A.
2011 Tissue specific distribution and dynamic changes of 5-hydroxymethylcytosine in mammalian genomeJ. Biol. Chem. Kinney, S.M. et al.
2011Regulation of expression and activity of DNA (cytosine-5) methyltransferases in mammalian cellsProg Mol Biol Transl Sci.Kinney, S.R. and Pradhan, S.
2013Ten eleven translocation enzymes and 5-hydroxymethylation in mammalian development and cancerAdv Exp Med BiolKinney, S.R. and Pradhan, S.
1995Disruption of the target G-C base-pair by the HhaI methyltransferase.GeneKlimasauskas, S., and Roberts, R.J.
1994Hhal Methyltransferase Flips its Target Base Out of the DNA Helix.CellKlimasauskas, S., Kumar, S., Roberts, R.J., and Cheng, X.
1995M.Hhal binds tightly to substrates containing mismatches at the target base.Nucl.Acids Res.Klimasauskas, S.and Roberts, R.J.
2007The level of synthesis and secretion of Gaussia princeps luciferase in transfected CHO cells is heavily dependent on the choice of signal peptideJ. BiotechnolKnappskog, S., Ravneberg, H., Gjerdrum, C., Trosse, C., Stern, B., and Pryme I.F.
2007Use of intein-mediated phosphoprotein arrays to study substrate specificity of protein phosphatasesBiotechniquesKochinyan, S., et al.
2007Use of intein-mediated phosphoprotein arrays to study substrate specificity of protein phosphatases.BioTechniquesKochinyan, S., Sun.L., Ghosh, I., Barshevsky, T., Xu, J.and Xu, M.Q.
2013Increasing cleavage specificity and activity of restriction endonuclease KpnINucleic Acids ResearchKommireddy Vasu, Easa Nagamalleswari, Mai Zahran, Petra Imhof, Shuang-yong Xu, Zhenyu Zhu, Siu-Hong Chan, Valakunja Nagaraja
1998Analyzing the Functional Organization of a Novel Restriction Modification System, the BcgI System.J.Mol.Biol.Kong, H
1987Isolation and Identification of restriction endonuclease BstFINucl.Acids Res.Kong, H and Chen, Z.
1997Substrate DNA and cofactor regulate the activities of a multi-functional restriction-modification enzyme, Bcgl.Nucl.Acids Res.Kong, H., and Smith, C.L.
1998Does Bcg1, a Unique Restriction Endonuclease, Require Two Recognition Sites for Cleavage?J Biol.Chem Kong, H., and Smith, C.L.
1993Characterization of DNA Polymerase from the Hyperthermophile Archaea Thermococcus litoralis.J.Biol.Chem.Kong, H., Kucera, R.B., and Jack, W.E.
2000Functional analysis of putative restriction-modification system genes in the Helicobacter pylori J99 genome.Nucl.Acids Res.Kong, H., Lin, L.F., Porter, N., Stickel, S.Byrd, D., Posfai, J.and Roberts R.J.
1990A new type II restriction endonuclease, BsmAI, from Bacillus stearothermophilus.Nucl.Acids Res.Kong, H., Morgan, R.D., and Chen, Z.
1990Identification of a new type II restriction endonuclease BsaAI.Nucl.Acids Res.Kong, H., Morgan, R.D., and Chen, Z.
1993A unique restriction endonuclease, BcgI, from Bacillus coagulans.Nucl.Acids Res.Kong, H., Morgan, R.D., Maunus, R.E., and Schildkraut, I.
1994Characterization of BcgI, a new kind of restriction-modification system.J.Biol.Chem.Kong, H., Roemer, S.E., Waite-Rees, P.A., Benner, J.S., Wilson, G.G., and Nwankwo, D.O.
2015Cloning Should Be Simple: Escherichia coli DH5α-Mediated Assembly of Multiple DNA Fragments with Short End HomologiesPLoS OneKostylev M., Otwell A.E., Richardson R., Suzuki Y.
2008Novel endo-alpha-N-acetylgalactosaminidases with broader substrate specificity.GlycobiologyKoutsioulis, D., Landry, D.and Guthrie E.P.
2010Coordination sphere of the third metal site is essential to the activity and metal selectivity of alkaline phosphatases.Protein Sci.Koutsioulis, D., Lyskowski, A.Maki, S., Guthrie, E., Feller, G., Bouriotis, V.and Heikinheimo, P.
2015Overview of Target Enrichment Strategies.current Protocols in Molecular BiologyKozarewa, I., Armisen, J., Gardner, A.F., Slatko, B.E. and Hendrickson, C.L.
1998Drosophila Hormone Receptor 38 Functions in Metamorphosis: A Role in Adult Cuticle Formation.GeneticsKozlova, T., Pokholkova, G.V., Tzertzinis, G., Sutherland, J.D., Zhimulev, I.F.and Kafatos, F.C.
2006Fluorescence-mediated analysis of mitochondrial preprotein import in vitroAnal. Biochem.  Krayl M. et al.
2014The complex methylome of the human gastric pathogen Helicobacter pyloriNucleic Acids ResKrebes J, Morgan RD, Bunk B, Spröer C, Luong K, Parusel R, Anton BP, König C, Josenhans C, Overmann J, Roberts RJ, Korlach J, Suerbaum S
2017A practical guide to the oral microbiome and its relation to health and diseaseKrishnan, K., Chen, T., Paster, B.J.
2008Subunit-specific surface mobility of differentially labeled AMPA receptor subunitsEur. J. Cell Biol. Kropf M. et al.
2005Covalent immobilization of recombinant fusion proteins with hAGT for single molecule force spectroscopyEur. Biophys. J Kufer S.K. et al.
1995Active site and oligosaccharide recognition residues of peptide-N4-(N-acetyl-beta-D-glucosaminyl)asparagine amidase F.J.Biol.Chem.Kuhn, P., Guan, C., Cui, T., Tarentino, A.L., Plummer, T.H.J., and Van Roey, P.
1994Organization and sequence of the HpaII restriction-modification system and adjacent genes.GeneKulakauskas, S., Barsomian, J.M., Lubys, A., Roberts, R.J., and Wilson, G.G.
2014Whole-genome haplotyping using long reads and statistical methods.Nature BiotechnologyKuleshov, K. et al.
2007Mining predicted essential genes of Brugaria malayi for nematode drug targets.PLoS ONEKumar, S., Chaudhary, K., Foster, J., Novelli, J., Zhang, Y., Wang, S., Spiro, D., Ghedin, E.and Carlow.C.
1994The DNA (cytosine-5) methyltransferases.Nucl.Acids Res.Kumar, S., Cheng, X., Klimasauskas, S., Sha, M., Posfai, J., Roberts, R.J., and Wilson, G.G.
1997DNA containing 4'-thio-2' deoxycytidine inhibits methylation by HhaI methyltransferase.Nucl.Acids Res.Kumar, S., Horton, J.R., Jones, G.D., Walker, R.T., Roberts, R.J., and Cheng, X.
2010Evolutionary divergence in the fungal response to fluconazole revealed by soft clusteringGen. Bio. Kuo, D., et al.
2005Development of a minimal cell-free translation system for the synthesis of presecretory and integral membrance proteinsBiotechnol, Prog.Kuruma, Y., Nishiyama, K., Shimizu, Y., Muller, M and Ueda, T.
2014An RNA aptamer that specifically binds to the glycosylated hemagglutinin of avian influenza virus and suppresses viral infection in cellsPLoS OneKwon HM, Lee KH, Han BW, Han MR, Kim DH, Kim DEGlycobiology
2004Manipulation of carrier proteins in antibiotic biosynthesisChem. Biol. La Clair, J.J. et al.
1994Three-dimensional structure of the adenine-specific DNA methyltransferase M.Taq I in complex with the cofactor S-adenosylmethionine.Proc.Natl.Acad.Sci.USA Labahn, J., Granzin, J., Schluckebier, G., Robinson, D.P., Jack, W.E., Schildkraut, I., and Saenger, W.
2014MBD4 cooperates with DNMT1 to mediate methyl-DNA repression and protects mammalian cells from oxidative stressEpigeneticsLaget S, Miotto B, Chin HG, Estève PO, Roberts RJ, Pradhan S, Defossez PA
2010The human proteins MBD5 and MBD6 associate with heterochromatin but they do not bind methylated DNAPLoS OneLaget, S., et al.
2008Le double jeu de l’épigénétique: Cible et acteur du cancer [Master and servant: epigenetic deregulations as a cause and a consequence of cancer.]Med Sci (Paris)Laget, S.and Defossez, P.A.
2008Structures of the rare-cutting restriction endonuclease NotI reveal a unique metal binding fold involved in DNA binding.StructureLambert, A.R., Sussman, D., Shen, b., Maunus, R., Nix, J., Samuelson, J., Xu, S.Y.and Stoddard, B.L.
2011 Selection of peptides targeting helix 31 of bacterial 16S ribosomal RNA by screening M13 phage-display libraries Molecules Lamichhane, T.N., Abeydeera, N.D., Duc, A.C., Cunningham, P.R. and Chow, C.S
2012Engineering Escherichia coli for soluble expression and single step purification of active human lysozymeJournal of BiotechnologyLamppa, J.W., Tanyos, S.A., and Griswold, K.E.
2015Compounds targeting disulfide bond forming enzyme DsbB of Gram-negative bacteriaNature Chemical Biology Landeta, C., Blazyk, J.L., Hatahet, F., Meehan, B.M., Eser, M., Myrick, A., Bronstain, L., Minami, S., Arnold, H., Ke, N., Rubin, E.J., Furie, B.C., Furie, B., Beckwith, J., Dutton, R., Boyd, D.
2014Co-evolution between an Endosymbiont and Its Nematode Host: Wolbachia Asymmetric Posterior Localization and AP Polarity EstablishmentPLoS Negl Trop Dis Landmann F, Foster JM, Michalski ML, Slatko BE, Sullivan W
2014The role of an asymmetrically inherited endosymbiont in robust establishment of host embryonic polarityPLoS Negl. Trop. DisLandmann, F., Foster, J.M., Michalski, S., Slatko, B., Sullivan, W.
In vitro RNA interference and immunofluorescence-based phenotype analysis in a human parasitic nematode, Brugia malayiParasites and VectorsLandmann, F., Foster, J.M., Slatko, B.E. and Sullivan, W.
2010Asymmetric Wolbachia Segregation during Early Brugia malayi Embryogenesis Determines Its Distribution in Adult Host Tissues.PLoS Negl Trop DisLandmann, F., Slatko, B., Foster, J.M.and Sullivan, W.
1992Characterization of Type II DNA-Methyltransferases.Methods Enzymol.Landry, D., Barsomian, J.M., Feehery, G.R., and Wilson, G.G.
1989M.FokI methylates adenine in both strands of its asymmetric recognition sequence.Gene Landry, D., Looney, M.C., Feehery, G.R., Slatko, B.E., Jack, W.E., Schildkraut, I., and Wilson, G.G.
Database of DNA polymerasesCurr Protoc Mol Biol. Langhorst, B.W. and Nichols, N.M.
2012Polbase: a repository of biochemical, genetic and structural information about DNA polymerases.Nucl.Acids Res.Langhorst, B.W., Jack, W.E., Reha-Krantz, L.and Nichols, N.M.
2012Polbase: a repository of biochemical, genetic and structural information about DNA polymerasesNucleic Acids Res.Langhorst, B.W., Jack. W.E., Reha-Krantz, L. and Nichols, N.M.
2010Potential amyloid plaque-specific peptides for the diagnosis of Alzheimer's diseaseNeurobiol. Aging.Larbanoix, L. et al.
2015Rapid Preparation of Released N-Glycans for HILIC Analysis Using a Labeling Reagent that Facilitates Sensitive Fluorescence and ESI-MS DetectionAnal ChemLauber, M.A., Yu, Y.Q., Brousmiche,D.W., Hua, Z., Koza, S.M., Magnelli, P., Guthrie, E., Taron, C.H. and Fountain, K.J.
2014The Serine-Threonine Protein Kinase PAK4 Is Dispensable in Zebrafish: Identification of a Morpholino-Generated PseudophenotypePLoS OneLaw SH, Sargent TDGibson Assembly®
2006DNA Damage-induced Down-regulation of Human Cdc25C and Cdc2 is Mediated by Cooperation between p53 and Maintenance DNA (Cytosine 5) Methyltransferase 1.J Biol Chem.Le Gac, G., Esteve, P., Ferec, C.and Pradhan, S.
2016Simple and Highly Sensitive Molecular Diagnosis of Zika Virus by Lateral Flow Assays.Anal Chem.Lee D, Shin Y, Chung S, Hwang KS, Yoon DS, Lee JH
2015Production of bioactive chicken (Gallus gallus) follistatin-type proteins in E. coliAMB ExpressLee S.B., Park S.K., Kim Y.S.
2010Bacterial charity work leads to population-wide resistanceNatureLee, H.H., Molla, M.N., Cantor, C.R., Collina, J.J.
2008 Development of a dual-luciferase reporter system for in vivo visualization of MicroRNA biogenesis and posttranscriptional regulation Nucl. Med. Lee, J.Y., Kim, S., Hwang do, W., Jeong, J.M., Chung, J.K., Lee, M.C. and Lee, D.S.J.
2008Development of a dual-luciferase reporter system for in vivo visualization of MicroRNA biogenesis and posttranscriptional regulationNucl. Med.Lee, J.Y., Kim, S., Hwang do, W., Jeong, J.M.,Chung, J.K., Lee, M.C., Lee, D.S.J.
2009Characterization of RimO, a New Member of the Methylthiotransferase Subclass of the Radical SAM Superfamily.BiochemistryLee, K.H., Saleh, L., Anton, B.P., Madinger, C.L., Benner, J.S., Iwig, D.F., Roberts, R.J., Krebs, C., Booker, S.J.
2009High-throughput quantitative analysis of plant N-glycan using a DNA sequencer Biochem. Biophys. Res. Commun.  Lee, K.J., Jung, J.H., Lee, J.M,, So, Y., Kwon, O., Callewaert, N., Kang, H.A., Ko, K., Oh, D.B.
2009High-throughput quantitative analysis of plant N-glycan using a DNA sequencerBiochem. Biophys. Res. Commun. Lee, K.J., Jung, J.H., Lee, J.M., So, Y., Kwon, O., Callewaert, N., Kang, H.A., Ko, K., Oh, D.B.
1998Sequence Comparison of the EcoHK31I and EaeI Restriction-Modification Systems Suggests an Intergenic Transfer of Genetic Material.Biol.Chem.Lee, K-F, Shaw, P-C, Picone, S.J., Wilson, G.G.and Lunnen, K.D.
2006Structure and dynamics of the epidermal growth factor receptor C-terminal phosphorylation domainProtein Sci.Lee, N.Y., et al.
2015Highly efficient CRISPR/Cas9-mediated TAR cloning of genes and chromosomal loci from complex genomes in yeastNucleic Acids ResLee, NC., Larionov, V., Kouprina, N.
2015The complete methylome of Helicobacter pylori UM032BMC GenomicsLee, W.C., Anton, B.P., Wang, S., Baybayan, P., Singh, S., Ashby, M., Chua, E.G., Tay, C.Y., Thirriot, f., Loke, M.F., Goh, K.L., Marshall, B.J., Robert, R.J. and Vadivelu, J.
2007Inducing and sensing protein-protein interactions in living cells by selective cross-linkingAngew Chem. Int. Ed Lemercier, G. et al.
2015Evolution of stickleback in 50 years on earthquake-uplifted islands.Proc Natl Acad Sci U S ALescak EA, Bassham SL, Catchen J, Gelmond O, Sherbick ML, von Hippel FA, Cresko WA.
2017Dynamics of 5-carboxylcytosine during hepatic differentiation: potential general role for active demethylation by DNA repair in lineage specificationLewis, L.C., Lo, P.C., Foster, J.M., Dai, N., Correa, I.R., Jr., Durczak, P.M., Duncan, G., Ramsawhook, A., Aithal, G.P., Denning, C., Hannan, N.R., Ruzov, A.
2014A Modified Janus Cassette (Sweet Janus) to Improve Allelic Replacement Efficiency by High-Stringency Negative Selection in Streptococcus pneumoniaePLoS OneLi Y, Thompson CM, Lipsitch MGibson Assembly®
2011A piggyBac transposon-based mutagenesis system for the fission yeast Schizosaccharomyces pombe  Nuc. Acids Res. Li, J., Zhang, J.-M., Li, X. et al
2010Peptide ligands that use a novel binding site to target both TGF-β receptorsMol. Biosyst.Li, L. et al.
2012Characterization of transcription factors that regulate the Type IV secretion system and riboflavin biosynthesis in Wolbachia of Brugia malayiPLOS OneLi, Liz and Carlow, C.
2011Targeting the Wolbachia Cell Division Protein FtsZ as a New Approach for Antifilarial Therapy.PLoS Neglected Tropical DiseasesLi, Z., Garner, A.L., Gloeckner, C., Janda, K.D.and Carlow, C.K.
2010A novel peptide specifically targeting the vasculature of orthotopic colorectal cancer for imaging detection and drug deliveryJ. Control ReleaseLi, Z.J. et. al.
2004Soluble expression and affinity purification of functional domain of human acetylcholine receptor alpha-subunit by the modulation of maltose binding protein.Biotechnol Lett.Li, Z.Y., Li, Y.J., Guo, C.Y., Shi, Y.W., Xu, M-Q., Trommer, W.E.and Yuan, J.M.
2011Identification and characterization of the cofactor-independent phosphoglycerate mutases of Dirofilaria immitis and its Wolbachia endosymbiont.Veterinary ParasitologyLi.Z., Galvin, B., Raverdy, S.and Carlow, C.K.S.
2013 Biochemical and physiological characterization of fut4 and fut6 mutants defective in arabinogalactan-protein fucosylation in Arabidopsis.J. Exp. Bot.Liang, Y., Basu, D., Pattathil, S., Xu, W.L., Venetos, A., Martin, S.L., Faik, A., Hahn, M.G. and Showalter, A.M.
2016Characterization of innate immunity genes in the parasitic nematode Brugia malayiSymbiosisLibro, S., Slatko, B.E. and Foster, J.M.
2009Comprehensive mapping of long range interactions reveals folding principles of the human genomeScienceLieberman-Aiden E., van Berkum N., Williams L., Imakaev M., Ragoczy T., Telling A., Amit I., Lajoie B., Sabo P., Dorschner M., Sandstrom R., Bernstein B., BenderM. A., Groudine M., Gnirke A., Stamatoyannopoulos J., Mirny L., Lander E., Dekker J. Epigenetics
2013ROLE OF HUMAN HYPOXANTHINE GUANINE PHOSPHORIBOSYLTRANSFERASE IN ACTIVATION OF THE ANTIVIRAL AGENT T-705 (FAVIPIRAVIR)Molecular Pharmacology Fast ForwardLieve Naesens, Luke Guddat, Dianne Keough, André B.P. van Kuilenburg, Judith Meijer, Johan Vande Voorde and Jan Balzarini
2016Complete Genome Sequence and Methylome Analysis of Aeromonas hydrophila Strain YL17, Isolated from a Compost Pile.Genome Announc.Lim, Y.L., Roberts, R.J., Ee, R., Yin, W.F. and Chan, K.G.
1990Filarial paramyosin: cDNA sequences from Dirofilaria immitis and Onchocerca volvulus.Mol.Biochem.Parasitol.Limberger, R.J., and McReynolds, L.A.
2008 Selective labeling of proteins with chemical probes in living cells Physiology Lin M.Z. and Wang L.
2001Comparative genomics of the restriction-modification systems in Helicobacter pylori.Proc.Natl.Acad.Sci.USA Lin, L.F., Posfai, J., Roberts, R.J.and Kong, H.
2004Dual histone H3 methylation marks at lysines 9 and 27 required for interaction with Chromomethylase3.EMBO J.Lindroth, A.M., Shultis, D., Jasencakova, Z., Fuchs, J., Johnson, L., Scubert, D., Patnaik, D., Pradhan, S., Goodrich, J., Schubert, Il, Jenuwein, T., Khorasanizadeh, S.and Jacobsen, S.E
2014Engineering hydrogen gas production from formate in a hyperthermophile by heterologous production of an 18-subunit membrane-bound complexJ Biol ChemLipscomb GL, Schut GJ, Thorgersen MP, Nixon WJ, Kelly RM, Adams MWGibson Assembly®
2011New Clues in the Allosteric Activation of DNA Cleavage by SgrAI; Structures of SgrAI Bound to Cleaved Primary Site DNA and Uncleaved Secondary Site DNA.Acta Crystallogr.F.Structural biology and crystallization communications Little, E.J., Dunten, P.W., Bitinaite, J.and Horton, N.C.
2007Rational manipulation of carrier-domain geometry in nonribosomal peptide synthetasesChemBioChem. Liu E and Bruner S. D.
2015Enhanced production of secretory glycoprotein VSTM1-v2 with mouse IgGκ signal peptide in optimized HEK293F transient transfectionJ Biosci BioengLiu H., Zou X., Li T., Wang X., Yuan W., Chen Y., Han W.
2015Evaluation of a glycoengineered monoclonal antibody via LC-MS analysis in combination with multiple enzymatic digestionMAbsLiu R, Giddens J, McClung CM, Magnelli PE, Wang LX, Guthrie EP.
2015Identification of single nucleotide polymorphism markers associated with bacterial cold water disease resistance and spleen size in rainbow trout.Front Genet. Liu S, Vallejo RL, Palti Y, Gao G, Marancik DP, Hernandez AG, Wiens GD.
2008Disruption of the OCH1 and MNN1 genes decrease N-glycosylation on glycoprotein expressed inKluyveromyces lactisJ. Biotechnol. Liu, B., Gong, X., Chang, S., Yang, Y., Song, M., Duan, D., Wang, L., Ma, Q., and Wu, J.
2012Identification of genes containing ecdysone response elements in the genome of Brugia malayiMol Biochem ParasitolLiu, C., Enright, T., Tzertzinis, G. and Unnasch, T.R.
2015Functional analysis of microRNA activity in Brugia malayiInt J ParasitolLiu, C., Voronin, D., Poole, C.B., Bachu, S., Rogers, M.B., Jin, J., Ghedin, E., Lustigman, S., McReynolds, L.A. and Unnasch, T.R.
2010Novel peptide-dendrimer conjugates as drug carriers for targeting nonsmall cell lung cancerInt. J. NanomedicineLiu, J. et al.
2010D-peptide inhibitors of the p53-MDM2 interaction for targeted molecular therapy of malignant neoplasmsProc. Natl. Acad. Sci.Liu, M. et al.
2016Evaluation of a glycoengineered monoclonal antibody via LC-MS analysis in combination with multiple enzymatic digestionMAbsLiu, R., Giddens, J., McClung, C.M., Magnelli, P.E., Wang, L.X., Guthrie, E.P.
1998Site-directed Mutagenesis of Essential Residues Involved in the Mechanism of Bacterial Glycosylasparaginase.J.Biol.Chem.Liu, Y., Guan, C.and Aronson, N.N., Jr.
2012SHuffle, a novel Escherichia coli protein expression strain capable of correctly folding disulfide bonded proteins in its cytoplasmMicrobial Cell FactoriesLobstein, J., Emrich, C.A., Jeans, C., et al.
2012SHuffle, a novel Escherichia coli protein expression strain capable of correctly folding disulfide bonded proteins in its cytoplasmLobstein, J., Emrich, C.A., Jeans, C., Faulkner, M., Riggs, P. and Berkmen, M.
2016Erratum to: SHuffle, a novel Escherichia coli protein expression strain capable of correctly folding disulfide bonded proteins in its cytoplasm.Microb Cell Fact. Lobstein, J., Emrich, C.A., Jeans, C., Faulkner, M., Riggs, P. and Berkmen, M.
2010Comparative genomic hybridization of Bifidobacterium longum strains reveals broad conservation of milk utilization genes in subsp. infantisAppl. Environ. Microbiol. LoCascio, R.G., Desai, P., Sela, D.A., Weimer, B., and Mills, D.A.
2014Type I restriction enzymes and their relativesNucleic Acids ResLoenen WA, Dryden DT, Raleigh EA, Wilson GG
2014Highlights of the DNA cutters: a short history of the restriction enzymesNucleic Acids ResLoenen WA, Dryden DT, Raleigh EA, Wilson GG, Murray NE
2014The other face of restriction: modification-dependent enzymes.Nucleic Acids ResLoenen, W.A., Raleigh, E.A.Restriction Enzyme Digestion, Restriction Enzyme Digestion
2014The other face of restriction: modification-dependent enzymesNucleic Acids Res.Loenen, W.A.M. and Raleigh, E.A.
2015A high-throughput assay for the comprehensive profiling of DNA ligase fidelityNucleic Acids ResLohman GJ, Bauer RJ, Nichols NM, Mazzola L, Bybee J, Rivizzigno D, Cantin E, Evans TC Jr.
2016A high-throughput assay for the comprehensive profiling of DNA ligase fidelityNucleic Acids Res.Lohman, G.J., Bauer, R.J., Nichols, N.M., Mazzola, L., Bybee, J., Rivizzigno, D., Cantin, E., Evans, T.C., Jr.
2011DNA LigasesCurr Protoc Mol BiolLohman, G.J., Tabor, S., Nichols, N.M.
2011Kinetic characterization of single strand break ligation in duplex DNA by T4 DNA Ligase.J Biol Chem.Lohman, G.J.S., Chen, L.and Evans, T.C., Jr.
2011Expression of recombinant cytochromes c in E.coli.Methods Mol.Biol.Londer, Y.Y.
2015Functional Characterization of Cucurbitadienol Synthase and Triterpene Glycosyltransferase Involved in Biosynthesis of Mogrosides from Siraitia grosvenorii.Plant Cell PhysiolLonghai Dai, Can Liu, Yueming Zhu, Jiangsheng Zhang, Yan Men, Zeng Yan, Yuanxia SunHigh-Fidelity PCR
2015The evolutionary history of the embiotocid surfperch radiation based on genome-wide RAD sequence data.Mol Phylogenet Evol. Longo G, Bernardi G.
1989Nucleotide sequence of the FokI restriction-modification system: separate strand-specificity domains in the methyltransferase.Gene Looney, M.C., Moran, L.S., Jack, W.E., Feehery, G.R., Benner, J.S., Slatko, B.E., and Wilson, G.G.
2006Enabling Glycosyltransferase Evolution: A Facile Substrate-Attachment Strategy for Phage-Display Enzyme Evolution.Chembiochem.Love K.R., Swoboda J.G., Noren C.J.and Walker, S.
1997Human T-Cell Lukemia Virus Type 1 Tax Releases Cell Cycle Arrest Induced by p16INK4a.J.Virol.Low, K.G., Dorner, L.F., Fernando, D.B., Grossman, J., Jeang, K.T., and Comb, M.J.
2010Purification of untagged HIV-1 reverse transcriptase by affinity chromatographyProtein Expr. Purif.Lu, M., et. al.
2013Targeted drug delivery systems mediated by a novel peptide in breast cancer therapy and imagingPLoS OneLu, R.-M. et alPhage Display
2010Targeting of embryonic stem cells by peptide-conjugated quantum dotsPLoS OneLu, S. et al.
2010Designed semisynthetic protein inhibitors of ub/ubl e1 activating enzymesJ. Am. Chem. Soc. Lu, X., et al.
2016Heme acquisition in the parasitic filarial nematode Brugia malayi.FASEB J.Luck AN, Yuan X, Voronin D, Slatko BE, Hamza I, Foster JM.
2015Tissue-specific transcriptomics and proteomics of a filarial nematode and its Wolbachia endosymbiontBMC GenomicsLuck, A.N., Anderson, K.G., McClung, C.M., VerBerkmoes, N.C., Foster, J.M., Michalski, M.L. and Slatko, B.E. NEBNext® Sample Preparation for Next Generation Sequencing
2014Concurrent transcriptional profiling of Dirofilaria immitis and its Wolbachia endosymbiont throughout the nematode life cycle reveals coordinated gene expressionBMC GenomicsLuck, A.N., Evans, C.C., Foster, J.M., et al.
2017Removing the needle from the haystack: Enrichment of Wolbachia endosymbiont transcripts from host rematode RNA by Cappable-seqTMPLoS OneLuck, A.N., Slatko, B.E., Foster, J.M.
2016Heme acquisition in the parasitic filarial nematode Brugia malayi.FASEB J. Luck, A.N., Yuan, X., Voronin, D., Slatko, B.E., Hamza, I. and Foster, J.M.
2004Versatile protein biotinylation strategies for potential high-throughput proteomicsJ Am. Chem. Soc.Lue, R.Y., et al.
2005Analysis and function of prototype foamy virus envelope N glycosylationJ. Virol.  Lüftenegger, D., Picard-Maureau, M., Stanke, N., Rethwilm, A., Lindemann, D.
2000Understanding the immutability of restriction enzymes: crystal structure of BglII and its DNA substrate at 1.5 angstrom resolution.Nature Struct.Biol.Lukacs, C.M., Kucera, R., Schildkraut, I.and Aggarwal, A.K.
2013A near-infrared fluorophore for live-cell super-resolution microscopy of cellular proteins. Nature ChemistryLukinavicius, G., Umezawa, K., Olivier, N., Honigmann, A., Yang, G., Plas, T., Mueller, M., Reymond, L., Correa, I.R., Jr., Luo, Z.-G., Schultz, C., Lemke, E.A., Heppenstall, P., Eggeling, C., Manley, S. and Johnsson, K.
2014A versatile system for USER cloning-based assembly of expression vectors for mammalian cell engineeringPLoS OneLund AM, Kildegaard HF, Petersen MB, Rank J, Hansen BG, Andersen MR, Mortensen UHUSER™ Cloning
1988Cloning Type II restriction and modification genes.GeneLunnen, K.D., Barsomian, J.M., Camp, R.R., Card, C.O., Chen, S.Z., Croft, R., Looney, M.C., Meda, M.M., Moran, L.S., Nwankwo, D.O., Slatko, B.E., Van Cott, E.M., and Wilson, G.G.
1989Characterization and cloning of MwoI (GCN7GC), a new type-II restriction-modification system from Methanobacterium wolfei.Gene Lunnen, K.D., Morgan, R.D., Timan, C.J., Krzycki, J.A., Reeve, J.N., and Wilson, G.G.
2009Rational Design of a Fusion Partner for Membrane Protein Expression in E.coli.Protein Sci.Luo, J., Choulet, J.and Samuelson, J.C.
2013Restriction endonuclease TseI cleaves A:A and T:T mismatches in CAG and CTG repeatsNucleic Acids ResMa L, Chen K, Clarke DJ, Nortcliffe CP, Wilson GG, Edwardson JM, Morton AJ, Jones AC, Dryden DT
2014Time-resolved fluorescence of 2-aminopurine in DNA duplexes in the presence of the EcoP15I Type III restriction-modification enzymeBiochem Biophys Res CommunMa L, Wu X, Wilson GG, Jones AC, Dryden DT
1996A Cyclosporine A-Sensitive Small Molecular-Weight Cyclophilin Of Filarial Parasites.Mol.Biochem.Parasitol.Ma, D., Hong, X.Q., Raghavan, N., Scott, A.L., McCarthy, J.A., Nutman, T.B., Williams, S.A., and Carlow, C.K.S.
2002A novel cyclophilin from parasitic and free-living nematodes with a unique substrate-and drug-binding domain.J.Biol.Chem.Ma, D., Nelson, L.S., LeCoz, K., Poole, C.and Carlow, C.K.S.
1998Active site mutants of a cyclosporin A-insensitive cyclophilin from Brugia malayi: effect on catalysis and drug binding.Mol.Biochem.Parasitol.Ma, D.and Carlow, C.K.S.
1999Molecular characterization of FKBP13 from filarial parasites.Mol.Biochem.Parasitol.Ma, D.and Carlow, C.K.S.
2015microRNA profiling in the zoonotic parasite Echinococcus canadensis using a high-throughput approach.Parasites & VectorsMacchiaroli, N. et al.
200813C-sialic acid labeling of glycans on glycoproteins using ST6Gal-IJ. Am. Chem Soc. Macnaughtan, M.A., Tian, F., Liu, S., Meng, L., Park, S., Azadi, P., Moremen, K.W., Prestegard, J.H.
2010Constitutive secretion in Tetrahymena thermophila.Eukaryot Cell Madinger, C.L., collins, K., Fields, L.G., Taron, C.H.and Benner, J.S.
2009The effect of carbon source on the secretome of Kluyveromyces lactis.ProteomicsMadinger, C.L., Sharma S.S., Anton, B.P., Fields, L.G., Cushing, M.L., Canovas, J., Taron, C.H., and Benner, J.S.
2009The effect of carbon source on the secretome of Kluyveromyces lactisProteomicsMadinger, C.L., Sharma, S.S., Anton, B.P., Fields, L.G., Cushing, M.L., Canovas, J., Taron, C.H. and Benner, J.S.
2010The role of elF1 in translation initiation codon solection in Caenorhabditis elegans.GeneticsMaduzia, L.L., Moreau, A., Poullet, N., Chaffre, S.and Zhang, Y.
2011C.elegans galectins LEC-6 and LEC-10 interact with similar glycoconjugates in the intestine.J Biol Chem.Maduzia, L.L., Yu, E.and Zhang, Y.
2012Identification and characterization of protein glycosylation using specific endo- and exoglycosidasesMethods Mol Biol. Magnelli P, Bielik A, Guthrie E. 
2011Identification and Characterization of Protein Glycosylation using Specific Endo- and ExoglycosidasesJ Vis Exp. Magnelli PE, Bielik AM, Guthrie EP.
2012Identification and characterization of protein glycosylation using specific endo-and exoglycosidasesMethods Mol BiolMagnelli, P., Bielik, A., Guthrie, E.
2011Identification and characterization of protein glycosylation using specific endo- and exoglycosidases.Methods Mol.Biol.Magnelli, P., Bielik, A.and Guthrie, E.
2009A synthetic peptide mediated actvie targeting of cisplatin liposomes to Tie2 expressing cellsJ. Control Release.Mai, J. et al.
1987Dirofilaria immitis: Genomic Complexity and Characterication of a Structural Gene.Molecular Paradigms for Eradicating Helminthic ParasitesMaina, C.V., Grandea, A.G.I., Le, T.K.T., Nur, A., Williams, S.A., and McReynolds, L.A.
1988An Escherichia coli vector to express and purify foreign proteins by fusion to and separation from maltose-binding protein.GeneMaina, C.V., Riggs, P.D., Grandea, A.G.I., Slatko, B.E., Moran, L.S., Tagliamonte, J.A., McReynolds, L.A., and Guan, C.D.
2015The ribosome quality control pathway can access nascent polypeptides stalled at the Sec61 transloconMol Biol CellMalsburg K., Shao S., Hegde RS.
2014A semi-synthetic organism with an expanded genetic alphabetNatureMalyshev, D.A., Dhami, K., Lavergne, T., chen, T., Dai, N., Foster, J.M., Correa Jr., I.R. and Romesberg, F.E.
2012Efficient and sequence-independent replication of DNA containing a third base pair establishes a functional six-letter genetic alphabet.Proc. Natl. Acad. Sci. USAMalyshev, D.A., Dhami, K., Quach, H.T., Lavergne, T., Ordoukhanian, P., Torkamani, A. and Romesberg, F.E.
2010FRT-Seq: amplification-free, strand-specific transciptome sequencingNature Methods Mamanova, L., Andrews, R.M., James, K.D., Sheridan, E.M., Ellis, P.D., Langford, C.F., Ost, T.W., Collins, J.E. and Turner, D.J.
2015Rapid detection of equine coronavirus by reverse transcription loop-mediated isothermal amplification.J Virol MethodsManabu Nemoto, Yoshinori Morita, Hidekazu Niwa, Hiroshi Bannai, Koji Tsujimura, Takashi Yamanaka, Takashi KondoIsothermal Amplification
2010Expression, purification, phosphorylation and characterization of recombinant human statherinProtein Expr Purif.Manconi, B., et. al.
2014Therapeutic epitopes of Leptospira LipL32 protein and their characteristicsProtein Eng Des SelManeewatch S, Adisakwattana P, Chaisri U, Saengjaruk P, Srimanote P, Thanongsaksrikul J, Sakolvaree Y, Poungpan P, Chaicumpa WPhage Display
2008Optical lock-in detection of FRET using synthetic and genetically encoded optical switchesBiophys. J. Mao S. et al.
2015Rapid isolation and single-molecule analysis of ribonucleoproteins from cell lysate by SNAP-SiMPullRNAMargaret L Rodgers, Joshua Paulson, Aaron A HoskinsSNAP Surface, SNAP Cell
2000Structure and function of the mouse DNA methyltransferase Gene, DNMT1 shows a tripartite structure.J.Mol.Biol.Margot, J.B., Aguirre-Arteta, A.M., DiGiacco, B.V., Pradhan, S., Roberts, R.J., Cardoso, M.C.and Leonhardt, H.
2009Optimization of 454 sequencing library preparation from small amounts of DNA permits sequence determination of both DNA strandsBiotechniques Maricic, T. and Pääbo, S.
2015Complete Genome Sequence of Curtobacterium sp. strain MR_MD2014, isolated from topsoil in Woods Hole, MassachusettsGenome Announc.Mariita, R.M., Bhatnagar, S., Hanselmann, K., Hossain, M.J., Korlach, J., Boitano, M., Roberts, R.J., Liles, M.R., Moss, A.G., Leadbetter, J.R., Newman, D.K., Dawson, S.C.
2015Complete Genome Sequence of Streptomyces sp. strain CCM_MD2014, isolated from topsoil in Woods Hole, MassachusettsGenome Announc.Mariita, R.M., Bhatnagar, S., Hanselmann, K., Hossain, M.J., Korlach, J., Boitano, M., Roberts, R.J., Liles, M.R., Moss, A.G., Leadbetter, J.R., Newman, D.K., Dawson, S.C.
2003Purification and characterisation of a novel DNA methyltransferase, M.AhdINucleic Acids ResearchMarks, P., McGeehan, J., Wilson, G., Errington, N. and Kneale, G.
1994The I-CeuI endonuclease: purification and potential role in the evolution of Chlamydomonas group I introns.Eur. J. BiochemMarshall, P., Davis, T.B., Lemieux,C.
2014The ambrosia symbiosis is specific in some species and promiscuous in others: evidence from community pyrosequencing.ISME JMartin Kostovcik, Craig C Bateman, Miroslav Kolarik, Lukasz L Stelinski, Bjarte H Jordal, Jiri HulcrHigh-Fidelity PCR
2001Characterization of a naturally occurring trans-splicing intein from Synechocystis sp.PCC6803.Biochemistry Martin, D.D., Xu, M-Q and Evans, T.C.Jr.
2016Genetics: profiling DNA methylation and beyondNature MethodsMarx V.Epigenetics, Restriction Enzymes for Epigenetics
2014The CLO3403/CLO3404 Two-Component System of Clostridium botulinum E1 Beluga Is Important for Cold Shock Response and Growth at Low TemperaturesAppl Environ MicrobiolMascher G, Derman Y, Kirk DG, Palonen E, Lindström M, Korkeala H
2015Transition in sexual system and sex chromosome evolution in the tadpole shrimp Triops cancriformis.Heredity (Edinb). Mathers TC, Hammond RL, Jenner RA, Hänfling B, Atkins J, Gómez A.
1999Characterization of a self-splicing mini-intein and its conversion into autocatalytic N- and C-terminal cleavage elements: facile production of protein building blocks for protein ligation.GeneMathys, S., Evans, T.C., Chute, I.C., Wu, H., Chong, S., Benner, J., Liu, X.Q.and Xu, M.Q.
2014Prospective identification of parasitic sequences in phage display screensNucleic Acids ResMatochko WL, Cory Li S, Tang SK, Derda RPhage Display
2013Role of DNA methylation in expression and transmission of porcine endogenous retroviruses.Journal of Virology.Matousková, M., Vesely, P., Daniel, P., Mattiuzzo, G., Hector, R.D., Scobie, L., Takeuchi, Y. and Hejnar, J.
2010A novel melanoma-targeting peptide screened by phage display exhibits antitumor activityJ. Mol. Med.Matsuo, A.L. et al.
2008Cell-surface protein-protein interaction analysis with time-resolved FRET and SNAP-tag technologies: application to GPCR oligomerizationNature Methods Maurel D. et al.
2010Photoactivatable and photoconvertible fluorescent probes for protein labelingACS Chem. Biol. Asap Maurel D. et al.
2009"Adenosine Triphosphate Stimulates Aquifex aeolicus MutL Endonuclease Activity"PLoS ONEMauris, J., & Evans, J
2010A human PMS2 homologue from Aquifex aeolicus stimulates an ATP-dependent DNA helicase.J Biol.ChemMauris, J.and Evans, T.C., Jr.
1985The effect of site specific methylation on restriction endonuclease digestion.Nucl.Acids Res.McClelland, M., and Nelson, M.
1987Enhancement of the apparent cleavage specificities of restriction endonucleases: applications to megabase mapping of chromosomes.McClelland, M., and Nelson, M.
1987Restriction endonucleases for pulsed field mapping of bacterial genomes.Nucl.Acids Res.McClelland, M., Jones, R., Patel, Y., and Nelson, M.
1985Purification of MboII methylase (GAAGmA) from Moraxella bovis: site specific cleavage of DNA at nine and ten base pair sequences.Nucl.Acids Res.McClelland, M., Nelson, M., and Cantor, C.R.
2013Decreased vancomycin susceptibility in Staphylococcus aureus caused by IS256 tempering of WalKR expressionAntimicrob Agents ChemotherMcEvoy CR, Tsuji B, Gao W, Seemann T, Porter JL, Doig K, Ngo D, Howden BP, Stinear TP
2014Genomics of CpG methylation in developing and developed zebrafishG3 (Bethesda)McGaughey DM, Abaan HO, Miller RM, Kropp PA, Brody LC
2014Identification and Characterization of a Suite of Tumor Targeting Peptides for Non-Small Cell Lung CancerSci RepMcGuire MJ, Gray BP, Li S, Cupka D, Byers LA, Wu L, Rezaie S, Liu YH, Pattisapu N, Issac J, Oyama T, Diao L, Heymach JV, Xie XJ, Minna JD, Brown KCPhage Display
2001Qualitative detection of apoptotic cells assessed by DNA fragmentation.Methods Mol.Biol.McIlwrath, A.J.
2014Expanded genetic codes in next generation sequencing enable decontamination and mitochondrial enrichmentPLoS OneMcKernan KJ, Spangler J, Zhang L, Tadigotla V, McLaughlin S, Warner J, Zare A, Boles RG
2008Septin stability and recycling during dynamic structural transitions in cell division and developmentCurrent Biology McMurray, M.A. and Thorner, J.
2010Endosymbiont DNA in endobacteria-free filarial nematodes indicates ancient horizontal genetic transfer.PLoS ONEMcNulty, S.N., Foster, J.M., Mitreva, M., Dunning-Hotopp, J.C., Martin, J., Fischer, K., Wu, B., Davis, P.J., Kumar, S., Brattig, N.W., Slatko, B.E., Weil, G.J.and Fischer, P.U.
1986Cloning and comparison of repeated DNA sequences from the human filarial parasite Brugia malayi and the animal parasite Brugia pahangi.Proc.Natl.Acad.Sci.USA McReynolds, L.A., DeSimone, S.M., and Williams, S.A.
1993The Polyprotien Allergens of Nematodes.Parasitol.Today McReynolds, L.A., Kennedy, M.W., and Selkirk, M.E.
1993Recent Advances in the Application of Molecular Biology in Filariasis.Proceeding of the 34th SEAMEO TROPMED Regional Seminar: Southeast Asian Journal of Tropical Medicine and Public HealthMcReynolds, L.A., Poole, C., Hong, Y., Williams, S.A., Partono, F., and Bradley, J.
1991Filarial DNA probes in Jakarta.Parasitol.TodayMcReynolds, L.A., Poole, C.B., and Williams, S.A.
2011ExonucleasesCurr.Protoc.Mol.Biol.McReynolds, L.A.and Nichols, N.M.
2014Ubiquity and diversity of human-associated demodex mites.PLoS OneMegan S Thoemmes, Daniel J Fergus, Julie Urban, Michelle Trautwein, Robert R DunnRoutine PCR
2014Insights into the initiation of JC virus DNA replication derived from the crystal structure of the T-antigen origin binding domainPLoS PathogMeinke G, Phelan PJ, Kalekar R, Shin J, Archambault J, Bohm A, Bullock PAGibson Assembly®
1994An analysis of the humoral immune response of dogs following vaccination with irradiated infective larvae of Dirofilaria immitis.Parasite Immunol.Mejia, J.S., and Carlow, C.K.S.
1994Expression of an Onchocerca volvulus Ov33 homolog in Dirofilaria immitis: potential in immunodiagnosis of heartworm infection.Parasite Immunol.Mejia, S.J., Knenfou, C., Southworth, M.W., Perler, F.B.and Carlow, C.K.
2015Antigenic properties of the human immunodeficiency virus envelope glycoprotein gp120 on virions bound to target cellsPLoS PathogMeron Mengistu, Krishanu Ray, George K Lewis, Anthony L DeVicoSNAP Surface, SNAP Cell
2007Tasting Phenylthiocarbamide (PTC): A New Lab With an Old Flavor.Am.Biol.Teacher Merritt, R., Bierwort, L., Slatko, B., Weiner, M., Weiner, E., Ingram, J.and Sciarra, K.
2008Tasting Phenylthiocarbamide (PTC): A New Lab With an Old Flavor.Am.Biol.TeacherMerritt, R., Bierwort, L., Slatko, B., Weiner, M., Weiner, E., Ingram, J.and Sciarra, K.
2006Covalent labeling of cell-surface proteins for in vivo FRET studiesFEBS Letters Meyer B.H. et al.
2006FRET imaging reveals that functional neurokinin-1 receptors are monomeric and reside in membrane microdomains of live cellsProc. Natl. Acad. Sci. USA Meyer B.H. et al.
2016Phenotypic and molecular analysis of the effect of 20 hydroxyecdysone on the human filarial parasite Brugia malayiInt J ParasitolMhashilkar, A.S., Adapa, S.R., Jiang, R.H., Williams, S.A., Zaky, W., Slatko, B.E., Luck, A.N., Moorhead, A.R. and Unnasch, T.R.
2016Phenotypic and molecular analysis of the effect of 20-hydroxyecdysone on the human filarial parasite Brugia malayi.Int J ParasitolMhashilkar, A.S., Adapa, S.R., Jiang, R.H., Williams, S.A., Zaky, W., Slatko, B.E., Luck, A.N., Moorhead, A.R. and Unnasch, T.R.
2016Identification of Ecdysone Hormone Receptor Agonists as a Therapeutic Approach for Treating Filarial Infections.PLoS Negl Trop Dis.Mhashilkar, A.S., Vankayala, S.L., Liu, C., Kearns, F., Mehrotra, P., Tzertzinis, G., Palli, S.R., Woodcock, H.L. and Unnaschm, T.R.
1995Functional analysis of Gln-237 mutants of HhaI methyltransferase.Nucl.Acids Res.Mi, S., Alonso, D., and Roberts, R.J.
2010Identification and Phylogenetic Analysis of Dirofilaria Ursi (Nematoda: Filarioidea) from Wisconsin Black Bears (Ursus americanus) and its Wolbachia EndosymbiontJ Parasitol.Michalski, S., Bain, O., Fischer, K.Fishcher, P., Kumar, S.and Foster, J.
2008Spectral resolved gene technology for multiplexed bioluminescence and high content screening Anal. Chem. Michelini, E., Cevenini, L., Mezzanote, L., Ablamsky, D., Southworth, T., Branchini, B. and Roda, A.
2011Mutational and biochemical analysis of the DNA-entry nuclease EndA from Streptococcus pneumoniae Nucleic Acids Res. Midon, M., Schäfer, P., Pingoud, A., Ghosh, M., Moon, A.F., Cuneo, M.J., London, R.E. and Meiss, G.
2007Influence of chelate conjugation on a newly identified tumor-targeting peptideJ. Nucl. Med.Mier, W. et al.
1998Crystal Structure of the Cyclophilin-like Domain from the Parasitic Nematode Brugia Malayi.Protein Sci.Mikol, V., Ma, D., Carlow, C.K.S.
2009Lateral transport of smoothened from the plasma membrane to the membrane of the ciliumJ. Cell Biol. Milenkovic L. et al.
1998Evolutionary evidence for recombination among bacteria in nature.E.coli.Horizontal Gene Transfer Milkman, R., Cryderman, D., McKane, M., McWeeny, K.and Raleigh E.A.
1999Molecular evolution of the Escherichia coli chromosome.V.Recombination patterns among strains of diverse origin.GeneticsMilkman, R., Raleigh, E.A., McKane, M., Cryderman, D.and Pohlman, K.
2014Protein splicing: how inteins escape from precursor proteinsJ Biol ChemMills KV, Johnson MA, Perler FB
2005The mechanisms of intein-mediated protein splicing: variations on a theme.IUBMB LifeMills, K.V.and Perler, F.B.
2015Comparison of loop-mediated isothermal amplification and real-time PCR for detecting Bordetella pertussis.J Med MicrobiolMohammad Reza Allahyar Torkaman, Kazunari Kamachi, Vajihe Sadat Nikbin, Masoumeh Nakhost Lotfi, Fereshteh ShahcheraghiIsothermal Amplification
2011Permanent Genetic Resources added to Molecular Ecology Resources Database 1 April 2011-31 May 2011.Mol Ecol Resour.Molecular Ecology Resources Primer Development Consortium, Bonizzoni, M., Bourjea, J., Chen, B., Crain, B.J., Cui, L., Fiorentino, V., Hartmann, S., Hendricks, S., Ketmaier, V., Ma, X., Muths, D., Pavesi, L., Pfautsch, S., Rieger, M.A., Santonastaso, T., Sattabongkot, J., Taron, C.H., Taron, D.J., Tiedemann, R., Yan, G., Zheng, B.and Zhong, D.
2016Single-cell 5hmC sequencing reveals chromosome-wide cell-to-cell variability and enables lineage reconstructionNature BiotechnologyMooijman D, Dey S S, Boisset JC, Crosetto N, van Oudenaarden AEpigenetics
2002Cho, a second endonuclease involved in Escherichia coli nucleotide excision repairProc. Natl. Acad. Sci. USMoolenaar GF, et al.
1990Nucleotide sequence of the phage l gt11 SacI-KpnI lacZ region.GeneMoran, L.S., Maina, C.V., Poole, C.B., and Slatko, B.E.
2005Expression of SMAP-29 cathelicidin-like peptide in bacterial cells by intein-mediated systemProtein Expr. Purif.Morassutti, C., et al.
1995Minimum duplex requirements for restriction enzyme cleavage near the termini of linear DNA fragments.BioTechniquesMoreira, R.F., and Noren, C.J.
2000Characterization of the Specific DNA Nicking Activity of Restriction Endonuclease N.BstNBI.Biol.Chem.Morgan, R., Calvet, C., Demeter, M., Agra, R.and Kong, H.
1998Characterization of an Extremely Thermostable Restriction Enzyme, PspGI, from a Pyrococcus Strain and Cloning of the PspGI Restriction-Modification System in Escherichia coli.Appl.Environ.Microbiol.Morgan, R., Xiao, J.P.and Xu, S.Y.
1988MseI, a unique restriction endonuclease from Micrococcus species which recognizes 5'T^TAA 3'.Nucl.Acids Res.Morgan, R.D.
2016omplete Genome Sequence and Methylome Analysis of Bacillus globigii ATCC 49760.Genome Announc.Morgan, R.D.
1996Molecular cloning and expression of NlaIII restriction-modification system in E.coli.GeneMorgan, R.D., Camp, R.R., Wilson, G.G., and Xu, S.Y.
1987A unique type II restriction endonuclease from Acinetobacter lwoffi N.Nucl.Acids Res.Morgan, R.D., Dalton, M., and Stote, R.
2009The MmeI Family: Type II Restriction-Modificaton Enzymes That Employ Single-Strand Modification for Host Protection.Nucl.Acids.Res.Morgan, R.D., Dwinell, E.A., Bhatia, T.K., Lang, E.M.and Luyten, Y.A.
2016Novel m4C modification in type I restriction-modification systems.Nucleic Acids Res. Morgan, R.D., Luyten, Y.A., Johnson, S.A., Clough, E.M., Clark, T.A. and Roberts, R.J.
2008MmeI: a minimal Type II restriction-modification system that only modifies one DNA strand for host protection.Nucl.Acids.Res.Morgan, R.D.,  Bhatia, T.K., Lovasco, L.and Davis, T.B.
2009Rational Engineering of Type II Restriction Endonuclease DNA Binding and Cleavage Specificity.Nucl.Acids.Res.Morgan, R.D.and Luyten, Y.A.
2007Determination of silencing potency of synthetic and RNase Ill-generated siRNA using a secreted luciferase assay.BiotechniquesMorlighem, J.E., Petit, C and Tzertzinis, G.
2007Determination of silencing potency of synthetic and RNase III-generated siRNA using a secreted luciferase assay Biotechniques Morlighem, J.E., Petit, C. and Tzertzinis, G.
2007Determination of silencing potency of synthetic and RNase III-generated siRNA using a secreted luciferase assay.BioTechniquesMorlighem, J-E., Petit, C.and Tzertzinis, G.
2010Phosphopantetheinyl Transferase-Catalyzed Formation of Bioactive Hydrogels for Tissue EngineeringJ. Am. Chem. Soc. Mosiewicz, K. A. et al.
2007A Concise Synthesis of the Pennsylvania green fluorophore and labeling of intracellular targets with O6-Benzylguanine Derivatives Org. Lett. Mottram L. F. et al.
2016De novo SNP discovery and genetic linkage mapping in poplar using restriction site associated DNA and whole-genome sequencing technologies.BMC GenomicsMousavi M, Tong C, Liu F, Tao S, Wu J, Li H, Shi J.
2014The N-terminal domain modulates α-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) receptor desensitizationJ Biol ChemMöykkynen T, Coleman SK, Semenov A, Keinänen KGlycobiology
2009Targeting of tumor blood vessels: a phage-displayed tumor-homing peptide specifically binds to matrix metalloproteinase-2-processed collagen IV and blocks angiogenesis in vivoMol. Cancer Res.Mueller, J. et al.
2010Optimization of enzymatic reaction conditions for generating representative pools of cDNA from small RNA.RNAMunafo, D.and Robb, B.
2012Nematode-Bacterium Symbioses - Cooperation and Conflict Revealed in the 'Omics' AgeBiol. BulletinMurfin, K., Dillman, A., Foster, J., Bulgheresi, S., Slatko, B., Sternberg, P. and Goodrich-Blair, H.
2012The methylomes of six bacteriaNucleic Acids Res.Murray, I.A., Clark, T.A., Morgan, R.D., Boitano, M., Anton, B.P., Luong, K., Fomenkov, A., Turner, S.W., Korlach, J. and Roberts, R.J.
2010Sequence-specific cleavage of RNA by Type II restriction enzymes.Nucl.Acids.Res.Murray, I.A., Stickel, S.K.and Roberts, R.J.
2007Protein synthesis in liposomes with a minimal set enzymesBiochem. Biophys. Res. Commun.  Murtas, G., Kuruma, Y., Bianchini, P., Diaspro, A., and Luisi, P.L.
2006 Genetically Encoded but Nonpolypeptide Prolyl-tRNA Functions in the A Site for SecM-Mediated Ribosomal StallMol. Cell.Muto, H., Nakatogawa, H., and Ito, K.
2016Metabolic Incorporation of Azide Functionality into Cellular RNA.ChembiochemNainar, S., Beasley, S., Fazio, M., Kubota, M., Dai, N., Correa, I.R. Jr. and Spitale, R.C.
2016WGS for surveillance of antimicrobial resistance: a pilot study to detect the prevalence and mechanism of resistance to azithromycin in a UK population of non-typhoidal <em>Salmonella</em>.J Antimicrob Chemother. Nair, S. et al.
2004cDNA cloning and characterization of a secreted luciferase from the luminous Japanese ostracod, Cypridina noctilucaBiosci. Biotechnol. Biochem.Nakajima, Y., Kobayashi, K., Yamagashi, K., Enomoto, T., Ohmiya, Y.
2004 cDNA cloning and characterization of a secreted luciferase from the luminous Japanese ostracod, Cypridinanoctiluca Biosci. Biotechnol. Biochem. Nakajima, Y., Kobayashi, K., Yamagishi, K., Enomoto, T. and Ohmiya, Y.
2002Multiple pathways of Spx (YjbD) proteolysis in Bacillus subtilisJ. BacteriolNakano, S., et al.
2011 Docking-dependent ubiquitination of the interferon regulatory factor-1 tumor suppressor protein by the ubiquitin ligase CHIP J. Biol. Chem. Narayan, V., Pion, E., Landré, V., Müller, P. and Ball, K.L.
2010Restrained expression, a method to overproduce toxic membrane proteins by exploiting operator–repressor interactions Pro. Sci. Narayanan, A., Ridilla, M. and Yernool, D.A.
1988The Amino Acid Sequence of the Eukaryotic DNA [N6-adenine] Methyltransferase, M-CviBIII, Has Regions of Similarity With the Prokaryotic Isoschizomer M-TaqI and Other DNA [N6-adenine] Methyltransferases.GeneNarva, K.E., Van Etten, J.L., Slatko, B.E.and Benner, J.S.
1997Catalytic and DNA Binding Properties of PvuII Restriction Endonuclease Mutants.J.Biol.Chem.Nastri, H.G., Evans, P.D., Walker, I.H., and Riggs, P.D.
1989Characterization of clones of the BamHI methyltransferase geneJ. Cell Biochem.Nathan, P.D. and Brooks. J.E.
1988Characterization of clones of the BamHI methyltransferase gene.GeneNathan, P.D.and Brooks, J.E.
2008The BsaHI restriction-modification system: Cloning, sequencing and characterisation of DNA recognising motifs.BMC Molecular Biology Neely, R.K.and Roberts, R.J.
2011Decoding a Substantial Set of Samples in Parallel by Massive SequencingPLoS ONE  Neiman, M., Lundin, S., Savolainen, P., Ahmadian, A.
2011Introduction and historical overview of DNA sequencingCurr. Prot. Mol. Biol.Nelson, F.K, et. al.
1987Purification and assay of Type II DNA methylases.Methods Enzymol.Nelson, M., and McClelland, M.
1987The effect of site-specific methylation on restriction-modification enzymes.Nucl.Acids Res.Nelson, M., and McClelland, M.
1987The use of DNA methylases to alter the apparent recognition specificities of restriction endonucleases.Methods Enzymol.Nelson, M., and Schildkraut, I.
1984Alteration of apparent restriction endonuclease recognition specificities by DNA methylases.Nucl.Acids Res.Nelson, M., Christ, C., and Schildkraut, I.
2015Proteomic Analysis Reveals Aberrant O-GlcNAcylation of Extracellular Proteins from Breast Cancer Cell SecretionCancer Genomics ProteomicsNetsirisawan P., Chokchaichamnankit D., Srisomsap C., Svasti J., Champattanachai V.
2009Detection of ligand-induced CNTF receptor dimers in living cells by fluorescence cross correlation spectroscopyBiochim. Biophys. Acta.  Neugart F. et al.
1998Crystal Structure of Restriction Endonuclease BgII Bound to its Interrupted DNA Recognition Sequence.EMBO J.Newman, M., Lunnen, K., Wilson, G., Greci, J., Schildkraut, I., Phillips, S.E.
1994Structure of restriction endonuclease BamHI and its relationship to EcoRI.NatureNewman, M., Strzelecka, T., Dorner, L.F., Schildkraut, I., and Aggarwal, A.K.
1994Structure of restriction endonuclease BamHI phased at 1.95 A resolution by MAD analysis.StructureNewman, M., Strzelecka, T., Dorner, L.F., Schildkraut, I., and Aggarwal, A.K.
1995Structure of BamHI endonuclease bound to DNA: partial folding and unfolding on DNA binding.ScienceNewman, M., Strzelecka, T., Dorner, L.F., Schildkraut, I., and Aggarwal, A.K.
2013A membrane-bound NAC transcription factor, ANAC017, mediates mitochondrial retrograde signaling in ArabidopsisPlant CellNg S, Ivanova A, Duncan O, Law SR, Van Aken O, De Clercq I, Wang Y, Carrie C, Xu L, Kmiec B, Walker H, Van Breusegem F, Whelan J, Giraud EGibson Assembly®
2015Genetically encoded fragment-based discovery of glycopeptide ligands for carbohydrate-binding proteinsJ Am Chem SocNg, S., Lin, E., Kitov, P.I., Tjhung, K.F., Gerlits, O.O., Deng, L., Kasper, B., Sood, A., Paschal, B.M., Zhang, P., Ling, C.C., Klassen, J.S., Noren, C.J., Mahal, L.K., Woods, R.J., Coates, L. and Derda, R.
1998Novel, sensitive and low-cost diagnostic tests for "river blindness" - detection of specific antigens in tears, urine and dermal fluid.Trop.Med.Inter.Health Ngu, J.L., Knenfou, C., Capuli, E., McMoli, T.E., Perler, F., Mbwagbor, J., Tumme, C., Nlatte, O.B., Donfack, J.and Asonganyi, T.
2014Identification and characterization of mutant clones with enhanced propagation rates from phage-displayed peptide librariesAnal BiochemNguyen KT, Adamkiewicz MA, Hebert LE, Zygiel EM, Boyle HR, Martone CM, Meléndez-Ríos CB, Noren KA, Noren CJ, Hall MFPhage Display
2014Identification and characterization of mutant clones with enhanced propagation rates from phage-displayed peptide librariesAnal BiochemNguyen KT, Adamkiewicz MA, Hebert LE, Zygiel EM, Boyle HR, Martone CM, Meléndez-Ríos CB, Noren KA, Noren CJ, Hall MF
2011EndonucleasesCurr Protoc Mol BiolNichols, N.M.
2008Ribonucleases.Curr.Protoc.Mol.Biol.Nichols, N.M., and Yue, D.
2003Zinc Ion Effects on Individual Ssp DnaE Intein Splicing Steps: Regulating Pathway Progression.Biochemistry Nichols, N.M., Benner, J.S., Martin, D.D.and Evans, T.C.Jr.
2008RNA ligases.Curr.Protoc.Mol.Biol.Nichols, N.M., Tabor, S.and McReynolds, L.A.
2004Mutational Analysis of Protein Splicing, Cleavage, and Self-Association Reactions Mediated by the Naturally Split Ssp DnaE Intein.BiochemistryNichols, N.M.and Evans, T.C.Jr.
2010Development of SNAP-tag-mediated live cell labeling as an alternative to GFP in Porphyromonas gingivalisFEMS Immunol. Med. Microbiol.  Nicolle O. et al.
2008Identification of GATC- and CCGG-recognizing Type II REases and their putative specificity-determining positions using Scan2S--a novel motif scan algorithm with optional secondary structure constraints.ProteinsNiv, M.Y., Skrabanek, L., Roberts, R.J., Scheraga, H.A.and Weinstein, H.
2015A Structural and Functional Comparison Between Infectious and Non-Infectious Autocatalytic Recombinant PrP ConformersPLoS PathogNoble GP., Wang DW., Walsh DJ., Barone JR., Miller MB., Nishina KA., Li S., Supattapone S.
1996Potent Inhibition Of T7 Rna-Polymerase With A Truncated T7 Promoter.Abstracts Of Papers Of The American Chemical SocietyNoren, C.J., and Moreira, R.F.
2000Dissecting the Chemistry of Protein Splicing and its ApplicationsAngew.Chem.Int.Ed.Noren, C.J., Wang, J.and Perler, F.B.
2000Construction and use of pIII-displayed peptide librariesPhage Display: A Laboratory ManualNoren, K.A., Saltman, L.H.and Noren, C.J.
2001Construction of high-complexity combinatorial phage display peptide libraries.MethodsNoren, K.A.and Noren, C.J.
2009Identification and characterization of a peptide with affinity to head and neck cancerJ. Nucl. Med.Nothelfer, E.M. et al.
2010The tetrahymena argonaute-binding protein Giw1p directs a mature argonaute-siRNA complex to the nucleus Cell Noto, T., Kurth, H., Kataoka, K., Aronica, L., DeSouza, L., Siu, K., Pearlman, R., Gorovsky, M. and Mochizuki, K.
2009Characterization of the Caenorhabditis elegans UDP_Galactopyranose mutase homolog glf-1 reveals an essential role for galactofuranose metabolism in nematode surface coat synthesis.nematode surface coat synthesis.Dev.Biol.Novelli, J.F., Chaudhary, K., Canovas, J., Benner, J., Madinger, C., Kelly, P., Hodgkin, J.and Carlow, C.K.
1987Cloning of two type II methylase genes that recognise asymmetric nucleotide sequences: FokI and HgaI.Mol.Gen.Genet.Nwankwo, D., and Wilson, G.
1995Cloning of a pair of genes encoding isoschizomeric restriction endonucleases from Bacillus species: the BspEI and BspMII restriction and modification systems.GeneNwankwo, D.O.
1988Cloning and expression of the MspI restriction and modification genes.GeneNwankwo, D.O., and Wilson, G.G.
1996The XmnI Restriction-Modification System - Cloning, Expression, Sequence Organization And Similarity Between The R And M-Gene.GeneNwankwo, D.O., Lynch, J.J., Moran, L.S., Fomenkov, A., and Slatko, B.E.
1997Cloning and expression of AatII restriction-modification system in Escherichia coli.GeneNwankwo, D.O., Maunus, R.E., and Xu, S.Y.
1994Cloning, analysis and expression of the HindIII R-M-encoding genes.GeneNwankwo, D.O., Moran, L.S., Slatko, B.E., Waite-Rees, P.A., Dorner, L.F., Benner, J.S., and Wilson, G.G.
2006In vitro evidence for the dual function of Alg2 and Alg11: essential mannosyltransferases in N-linked glycoprotein biosynthesisBiochemistry O’Reilly, M.K., Zhang, G., Imperiali, B.
2014Identification of restriction-modification systems of Bifidobacterium animalis subsp. lactis CNCM I-2494 by SMRT sequencing and associated methylome analysisPLoS OneO'Connell Motherway M, Watson D, Bottacini F, Clark TA, Roberts RJ, Korlach J, Garault P, Chervaux C, van Hylckama Vlieg JE, Smokvina T, van Sinderen D
2014Gill bacteria enable a novel digestive strategy in a wood-feeding molluskProc Natl Acad Sci.O'Connor, R.M., Fung, J.M., Sharp, K.H., Benner, J.S., McClung, C., Cushing, S., Lamkin, E.R., Fomenkov, A.I., Henrissat, B., Londer, Y.Y., et al.
2006A genetic dissection of the LlaJI restriction cassette reveals insights on a novel bacteriophage resistance system.BMC Microbiol.O'Driscoll, J., Heiter, D.F., Wilson, G.G., Fitzgerald, G.F., Roberts, R.and van Sinderen, D.
1998Structures of HhaI methyltransferase complexed with substrates containing mismatches at the target base.Nature Struct.Biol.O'Gara, M., Horton, J.R., Roberts, R.J.and Cheng, X.
1996Enzymatic C5-Cytosine Methylation Of DNA - Mechanistic Implications Of New Crystal-Structures For HhaI Methyltransferase-DNA-Adohcy Complexes.J.Mol.Biol.O'Gara, M., Klimasauskas, S., Roberts, R., and Cheng, X.D.
1996A Structural Basis for the Preferential Binding of Hemimethylated DNA by HhaI DNA Methyltransferase.J.Mol.Biol.O'Gara, M., Roberts, R.J., and Cheng, X.
1999Structures of a Binary Complex of HhaI Methyltransferase with S-adenosyl-L-methionine Formed in the Presence of a Short Non-specific DNA Oligonucleotide.J.Mol.Biol.O'Gara, M., Zhang, X., Roberts, R.J.and Cheng, X.
2008Glycoengineering of the methylotrophic yeast Hansenula polymorpha for the production of glycoproteins with trimannosyl core N-glycan by blocking core oligosaccharide assembly Biotechnol. J. Oh, D.B., Park, J.S., Kim, M.W., Cheon, S.A., Kim, E.J., Moon, H.Y., Kwon, O., Rhee, S.K., Kang, H.A.
2007Chemical probes shed light on protein functionCurr. Opin. Struct. Biol. O'Hare H.M. et al.
2010A highly controllable reconstituted cell-free system--a breakthrough in protein synthesis researchCurr. Pharm. Biotechnol.Ohashi, H., Kanamori, T., Shimizu, Y. and Ueda, T.
2011A highly controllable reconstituted cell-free system--a breakthrough in protein synthesis researchCurr. Pharm. Biotechnol.Ohashi, H., Kanamori, T., Shimizu, Y. and Ueda, T.
2015Na, K-ATPase α3 is a death target of Alzheimer patient amyloid-β assembly.Proc Natl Acad Sci U S AOhnishi T., Yanazawa M., Sasahara T., Kitamura Y., Hiroaki H., Fukazawa Y., Kii I., Nishiyama T., Kakita A., Takeda H., Takeuchi A., Arai Y., Ito A., Komura H., Hirao H., Satomura K., Inoue M., Muramatsu S., Matsui K., Tada M., Sato M., Saijo E., Shigemitsu Y., Sakai S., Umetsu Y., Goda N., Takino N., Takahashi H., Hagiwara M., Sawasaki T., Iwasaki G., Nakamura Y., Nabeshima Y., Teplow D.B., Hoshi M.
2007Synthesis of Polyester by Means of Genetic Code ReprogrammingChem. Biol. Ohta, A., Murakami, H., Higashimura, E., and Suga, H.
2000Crystallization and preliminary X-ray diffraction analysis of MspI restriction endonuclease in complex with its cognate DNA.Acta Crystallogr.D.Biol.Crystallogr.O'Loughlin, T.J., Xu, Q., Kucera, R.B., Dorner, L.F., Sweeney, S., Schildkraut, I.and Guo, H.-C.
2015Caspr2 autoantibodies target multiple epitopes.Neurol Neuroimmunol NeuroinflammOlsen AL., Lai Y., Dalmau J., Scherer SS., Lancaster E.
2015Human sialic acid acetyl esterase: Towards a better understanding of a puzzling enzyme.GlycobiologyOrizio F., Damiati E., Giacopuzzi E., Benaglia G., Pianta S., Schauer R., Schwartz-Albiez R., Borsani G., Bresciani R., Monti E.
2009"Translational Recoding"The Wiley Encyclopedia of Chemical Biology, Tadhg P.Begley, EdOsborne, E.M.and Noren, C.J.
2008An amalgamation of solid phase peptide synthesis and ribosomal peptide synthesisBiopolymersOttesen, J. et al.
2009New Simulated Annealing Algorithms for Constrained Optimization.Asia-Pacific Journal for Operational ResearchOzdamar, L.and Pedamallu.C.S.
2015Stem cells. Asymmetric apportioning of aged mitochondria between daughter cells is required for stemnessScienceP, Katajisto., Dohla, J., Chaffer, CL., Pentinmikko, N., Marjanovic, N., Igbal, S., Zoncu, R., Chen, W., Weinberg, RA., Sabatini, DM.SNAP Cell
2015Hepatic Stellate Cell Transdifferentiation Involves Genome-Wide Remodeling of the DNA Methylation LandscapeJ HepatolPage A., Paoli P., Salvador E., White S., French J., Mann J.Epigenetics
1995Parasite Cyclophilins and Antiparasite Activity of Cyclosporin A.Parasitology Today Page, A.P., Kumar, S., and Carlow, C.K.S.
1995Molecular Characterization of a Cyclosporin A-Insensitive Cyclophilin from the Parasitic Nematode Brugia malayi.BiochemistryPage, A.P., Landry, D., Wilson, G.G., and Carlow, C.K.S.
2015Biochemical characterization of a Naegleria TET-like oxygenase and its application in single molecule sequencing of 5-methylcytosineProc Natl Acad Sci USAPais, J.E., Dai, N., Tamanaha, E., Vaisvila, R., Fomenkov, A.I., Bitinaite, J., Sun, Z., Guan, S., Correa, I.R. Jr., Noren, C.J., Cheng, X., Roberts, R.J., Zheng, Y. and Saleh, L.
2007Feedback inhibition of calcineurin and Ras by a dual inhibitory protein Carabin.NaturePan, F., Sun, L., Kardian, D., Whartenby, K., Pardoll, D.and Liu, J.O.
1991A new type II restriction endonuclease, BsoOI, from Bacillus stearothermophilusChinese Sci. BullPan, X.S. and Chen, Z.F.
2011The characterization of human adenylate kinases 7 and 8 demonstrates differences in kinetic parameters and structural organization among the family of adenylate kinase isoenzymes Biochem J.  Panayiotou, C., Solaroli, N., Xu, Y., Johansson, M. and Karlsson, A.
1998McrBs, a modulator peptide for McrBC activity.EMBO J.Panne, D., Raleigh E.A., Bickle, T.A.
1999The McrBC Endonuclease Translocates DNA in a Reaction Dependent on GTP Hydrolysis.J.Mol.Biol.Panne, D., Raleigh E.A.and Bickle, T.A.
2007Uncoupling metallonuclease metal ion binding sites via nudge mutagenesis.J Biol Inorg Chem Papadakos, G.A., Nastri, H., Riggs, P.and Dupureur, C.M.
2006TspMI, a thermostable isoschizomer of XmaI (5'C/CCGGG3'): characterization and single molecule imaging with DNA.Appl Microbiol.Biotechnol.Parashar, V., Capalash, N., Xu, S.Y., Sako, Y.and Sharma, P.
2016Rapid, Low-Cost Detection of Zika Virus Using Programmable Biomolecular ComponentsCellPardee P, Green A A, Takahashi M K, Braff D, Lambert G, Lee J W, Ferrante T, Ma D, Donghia N, Fan M, Daringer N M, Bosch I, Dudley D M, O’Connor D H, Gehrke H, Collins J J
2010Activation of DNA Cleavage by Oligomerization of DNA Bound SgrAI.BiochemistryPark, C.K., Stiteler, A.P., Shah, S., Ghare, M.I., Bitinaite, J.and Horton, N.C.
2011Expanding the genetic code of Escherichia coli with PhosphoserineSciencePark, H.S., Hohn, M.J., Umehara, T., Guo. L.T., Osborne, E.M., Benner, J., Noren, C.J., Rinehart, J. and Soll, D.
2008Variation of acharan sulfate and monosaccharide composition and analysis of neutral N-glycans in African giant snail (Achatina fulica)Glycoconjugate JournalPark, Y., Zhang, Z., Laremore, T.N., Li, B., Sim, J.S., Im, A.R., Ahn, M.Y., Kim, Y.S., Linhardt, R.J., Glycoconj, J.
2008RNA Polymerases.Curr.Protoc.Mol.Biol.Paschal, B.M., McReynolds, L.A., Noren, C.J.and Nichols, N.M.
2016Structural basis for human PRDM9 action at recombination hot spotsGenes DevPatel, A., Horton, J.R., Wilson, G.G., Zhang, X. and Cheng, X.
Structural basis for human PRDM9 action at recombination hot spots.Genes Dev.Patel, A., Horton, J.R., Wilson, G.G., Zhang, X. and Cheng, X.
2006Properties of the C-terminal domain of enzyme I of the Escherichia coli phosphotransferase system.J Biol Chem.Patel, H.V., Vyas, K.A., Mattoo, R.L., Southworth M., Perler, F.B., Comb, D.and Roseman, S.
1990Cleavage at the twelve-base-pair sequence 5'-TCTAGATCTAGA-3' using M.XbaI (TCTAGm6A) methylation and DpnI (Gm6A/TC) cleavage.Nucl.Acids Res.Patel, Y., Van Cott, E., Wilson, G.G., and McClelland, M.
2004Substrate specificity and kinetic mechanism of mammalian G9a histone H3 methyltransferase.J.Biol.Chem.Patnaik, D., chin, H.G., esteve, P.O., Benner, J., Jacobsen, S.E.and Pradhan, S.
2007Synthetic analogues of glycosylphosphatidylinositol-anchored proteins and their behavior in supported lipid bilayersJ. Am. Chem. Soc. Paulick, M. G., et al.
2010Open source tool for prediction of genome wide protein-protein interaction network based on ortholog information.Source Code for Biology and Medicine Pedamallu, C.and Posfai, J.
2008An interval partitioning algorithm for constraint satisfaction problems, IJMIC special issue on "Nonlinear Optimization with Engineering and Scientific Applications.IJMIC special issue on "Nonlinear Optimization with Engineering and Scientific ApplicationsPedamallu, C.S., Kumar, A., Csendes, T., and Posfai, J.
2008Efficient interval partitioning approach for global optimization.Journal of Global OptimizationPedamallu, C.S., Ozdamar, L., Csendes, T.and Vinko, T.
2009A Symbolic Interval Inference Approach for Constraint Satisfaction: Implementation of Kinematics ApplicationsInternational Journal of Operations ResearchPedamallu, C.S.and Ozdamar, L .
2008Incidence of occult carcinoma in multinodular goiter using histopathological findings.Internet journal of surgery TMPedamallu, R., Pedamallu, S.B., Rama Rao, K.V., and Pedamallu, C.S.
2008Reliability of Cycloplegic Autorefractor Measurements to determine Spherical and Astigmatic Refractive Errors in Young ChildrenJournal of Ophthalmology and Visual SciencePedamallu, S.B., Reddy, K.S., Pedamallu, R.and Pedamallu, C.S.
2017Using high-throughput barcode sequencing to efficiently map connectomesNucleic Acids ResearchPeikon, I.D., Kebschull, J.M., Vagin, V.V., Ravens, D.I, Sun, Y.-C., Brouzes, E., Correa, I.R., Bressan, D., Zador, A.M.
2011Two Color STED microscopy in living cells.Biomedical Optics Express Pellett, P.A., Sun, X., Gould, T.J., Rothman, J.E., Xu, M-Q, Corrêa, I.R.Jr.and Bewersdorf, J.
2014Evolution, mechanisms, and applications of intein-mediated protein splicingJ Biol ChemPerler FB, Allewell NM
2007Shining a light on protein expression in living organisms.Nat Chem Biol Perler, F.
1998Breaking up is easy with esters [news; comment].Nature Struct.Biol.Perler, F.B.
1998Protein Splicing of inteins and hedgehog autoproteolysis: structure, function and evolution.CellPerler, F.B.
1999A natural example of protein trans-splicing.TIBS Perler, F.B.
1999InBase, the New England Biolabs Intein Database.Nuc.Acids Res.Perler, F.B.
2000InBase, the Intein Database.Nuc.Acids Res.Perler, F.B.
2001Hyperthermophilic Inteins.Methods Enzymol.Perler, F.B.
2002InBase, the Intein Database.Nuc.Acids Res.Perler, F.B.
2004The ins and outs of gene expression control.Nat.Biotechnol.Perler, F.B.
2006Protein splicing mechanisms and applications.IUBMB Life Perler, F.B.
1986Cloning and characterization of two Onchocerca volvulus repeated DNA sequences.Mol.Biochem.Parasitol.Perler, F.B., and Karam, M.
2002The mechanism of protein splicing: variations on a theme.Peptides: Proceedings of the Twnety-Seventh European Peptide SymposiumPerler, F.B., Chen, L.and Southworth, M.W.
1992Intervening sequences in an Archaea DNA polymerase gene.Proc.Natl.Acad.Sci.USA Perler, F.B., Comb, D.G., Jack, W.E., Moran, L.S., Qiang, B., Kucera, R.B., Benner, J., Slatko, B.E., Nwankwo, D.O., Hempstead, S.K., Carlow, C.K.S.and Jannasch, H.
1994Protein splicing elements: inteins and exteins - a definition of terms and recommended nomenclature.Nucl.Acids Res.Perler, F.B., Davis, E.O., Dean, G.E., Gimble, F.S., Jack, W.E., Neff, N., Noren, C.J., Thorner, J., and Belfort, M.
1996Thermostable DNA Polymerases.Enzymes and Proteins from Hyperthermophilic Microorganisms, Advs.Protein ChemistryPerler, F.B., Kumar, S., and Kong, H.
1987Cloning and characterization of an abundant Plasmodium knowlesi antigen which cross reacts with Gambian sera.Mol.Biochem.Parasitol.Perler, F.B., Moon, A.M., Qiang, B.-Q., Meda, M., Dalton, M., Card, C., Schmidt-Ullrich, R., Wallach, D., Lynch, J., and Donelson, J.E.
1997Compilation and analysis of intein sequences.Nuc.Acids Res.Perler, F.B., Olsen, G.J., and Adam, E.
1995Typing marine vent thermophiles by DNA polymerase restriction fragement length polymorphisms.Archaea A Laboratory ManualPerler, F.B., Southworth, M.W., Wilbur, D.G., and Wallace, D.
1999"Protein Splicing"The Encyclopedia of Molecular BiologyPerler, F.B., Xu, M.and Noren, C.J.
1997Protein splicing and autoproteolysis mechanisms.Curr.Opin.Chem.Biol.Perler, F.B., Xu, M.-Q.and Paulus, H.
2000Protein splicing and its applications.Curr.Opin.Biotech.Perler, F.B.and Adam, E.
1980The Evolution of Genes: the Chicken Preproinsulin GeneCellPerler, F.B.and Efstratiadis, A.
2013The Evolution of Genes: the Chicken Preproinsulin GeneCellPerler, F.B.and Efstratiadis, A.
1990Altered specificity of restriction endonucleases HinfI.Nucl.Acids Res.Petronzio, T., and Schildkraut, I.
2015Complete Genome Sequence of Enteroinvasive Escherichia coli O96:H19 Associated with a Severe Foodborne OutbreakGenome AnnouncPettengill EA, Hoffmann M, Binet R, Roberts RJ, Payne J, Allard M, Michelacci V, Minelli F, Morabito S.
2004Intein-mediated purification of a recombinantly expressed peptideChem Commun (Camb)Pezza, J.A., Allen, K.N. and Tolan, D.R.
2007On the taxonomic status of the intracellular bacterium Wolbachia pipientis: should this species name include the intracellular bacteria of filarial nematodes?Int.J.Syst.Evol.Microbiol.Pfarr, K., Foster, J., Slatko B., Hoerauf, A.and Eisen, J.A.
2007It Takes Two: Lessons From the First Nematode Wolbachia Genome Sequence.Wolbachia, A Bug's LifePfarr, K., Foster, J.and Slatko, B.
2006It Takes Two: Lessons From the First Nematode Wolbachia Genome Sequence.Issues in Infectious DiseasePfarr, K., J.Foster and B Slatko
2014Impact of a transposon insertion in phzF2 on the specialized metabolite production and interkingdomJ BacteriolPhelan VV, Moree WJ, Aguilar J, Cornett DS, Koumoutsi A, Noble SM, Pogliano K, Guerrero CA, Dorrestein PCGibson Assembly®
1984Acetylcholinesterase secreted by intestinal nematodes: a reinterpretation of its putative role of "biochemical holdfast."Trans.Royal Soc Trop.Med.and Hyg.Philipp, M.
1986Biochemical and immunologic characterization of a major surface antigen of Dirofilaria immitis infective larvae.J.Immunol.Philipp, M., and Davis, T.B.
1988IMMUNITY IN FILARIASIS: Perspectives for Vaccine Development.Ann.Rev.Microbiol.Philipp, M., Davis , T.B., Storey, N., and Carlow, C.K.S.
2014Intranasal mRNA nanoparticle vaccination induces prophylactic and therapeutic anti-tumor immunitySci RepPhua KK, Staats HF, Leong KW, Nair SK
2007Distribution plasticity of the human estrogen receptor alpha in live cells: distinct imaging of consecutively expressed receptorsJ. Mol. Biol. Pick H. et al.
1987Highly Repeated DNA Sequences as Species-specific Probes for Brugia.Parasitology TodayPiessens, W.F., McReynolds, L.A.and Williams, S.A.
2005Crystal structures of an intein from the split dnaE gene of Synechocystis sp.PCC6803 reveal the catalytic model of intein without the penultimate histidine and the mechanism of zinc ion inhibition of protein splicing.J.Mol.Biol.Ping, S., Ye, S., Ferrandon, S., Evans, T.C., Xu, M-Q.and Rao, Z.
2014Type II restriction endonucleases-a historical perspective and moreNucleic Acids ResPingoud A, Wilson GG, Wende W
2016Type II restriction endonucleases - a historical perspective and more.Nucleic Acids ResPingoud, A., Wilson, G.G. and Wende, W.
2003PspGI, a type II restriction endonuclease from the extreme thermophile Pyrococcus sp.: structural and functional studies to investigate an evolutionary relationship with several mesophilic restriction enzymes.J.Mol.Biol.Pingoud, V., Conzelmann, C., Kinzebach, S., Sudina, A., Metelev, V., Kubareva, E., Bujnicki, J.M., Lurz, R., Luder, G., Xu, S.Y.and Pingoud, A
2005Specificity changes in the evolution of Type II restriction endonucleases- A Biochemical and bioinformatic analysis of restriction enzymes that recognize unrelated sequencesJ Biol. Chem.Pingoud, V., Sudina, A., Geyer, H., Bujnicki, J.M., Lurz, R., Luder, G., Morgan, R., Kubareva, E., Pingoud, A.
2009Prion protein glycosylation is not required for strain-specific neurotropism J Virol.  Piro, J.R., Harris, B.T., Nishina, K., Soto, C., Morales, R., Rees, J.R., Supattapone, S.
2015Genome-Wide Methylation Patterns in Salmonella enterica Subsp. enterica SerovarsPLoS OnePirone-Davies, C., Hoffmann, M., Roberts, R.J., Muruvanda, T., Timme, R.E., Strain, E., Luo, Y., Payne, J., Luong, K., Song, Y., Tsai, Y.C., Boitano, M., Clark, T.A., Korlach, J., Evans, P.S., Allard, M.W.
2008Heterologous expression of Mytilus californianus foot protein three (Mcfp-3) in Kluyveromyces lactisPlatko, J.D., et al.Platko, J.D., et al.
1998A Mitogen-activated Protein Kinase Pathway is Required for mu-Opioid Receptor Desensitization.J Biol Chem.Polakiewicz, R.D., Schieferl, S.M., Dorner, L.F., Kansra, V.and Comb, M.J.
1998Mu-Opioid Receptor Activates Signaling Pathways Implicated In Cell Survival And Translational Control.J.Biol.Chem.Polakiewicz, R.D., Schieferl, S.M., Gingras, A-C., Sonenberg, N.and Comb, M.J.
2000Structural Insights into the Protein Splicing Mechanism of PI-SceI.J.Biol.Chem.Poland, B.W., Xu, M.Q.and Quiocho, F.L.
1989MscI, a type II restriction endonuclease from Micrococcus species which recognizes 5' TGGCCA 3'.Nucl.Acids Res.Polisson, C.
1988AseI, a restriction endonuclease from Aquaspirillum serpens which recognizes 5'ATTAAT3'.Nucl.Acids Res.Polisson, C., and Morgan, R.D.
1988BsrI, a unique restriction endonuclease from Bacillus stearothermophilus which recognizes 5'ACTGG3'.Nucl.Acids Res.Polisson, C., and Morgan, R.D.
1988EarI, a restriction endonuclease from Enterobacter aerogenes which recognizes 5'CTCTTC3'.Nucl.Acids Res.Polisson, C., and Morgan, R.D.
1989DrdI, a unique restriction endonuclease from Deinococcus radiodurans which recognizes 5'GACN6GTC3'.Nucl.Acids Res.Polisson, C., and Morgan, R.D.
1990AciI, a unique restriction endonuclease from Arthrobacter citreus which recognizes 5' CCGC3'.Nucl.Acids Res.Polisson, C., and Morgan, R.D.
1992ApoI, a unique restriction endonuclease from Arthrobacter protophormiae which recognizes 5' RAATTY-3'.Nucl.Acids Res.Polisson, C., and Robinson, D.
2016Association of 5-hydroxymethylation and 5-methylation of DNA cytosine with tissue-specific gene expressionEpigenetics.Ponnaluri, V.K., Ehrlich, K.C., Zhang, G., Lacey, M., Johnston, D., Pradhan, S. and Ehrlich, M.
2017Association of 5-hydroxymethylation and 5-methylation of DNA cytosine with tissue-specific gene expressionEpigeneticsPonnaluri, V.K., Ehrlich, K.C., Zhang, G., Lacey, M., Johnston, D., Pradhan, S., Ehrlich, M.
2017NicE-seq: High resolution open chromatin profilingGenome BiologyPonnaluri, V.K.C., Zhang, G., Estève, P.-O., Spracklin, G., Sian, S., Xu, S.-Y., Benoukraf, T., Pradhan, S.
2015Genome Filtering for New DNA Biomarkers of Loa loa Infection Suitable for Loop-MediatedPLoS OnePoole CB, Ettwiller L, Tanner NA, Evans TC Jr., Wanji S,Carlow CK
2014Diversity and Expression of MicroRNAs in the Filarial Parasite, Brugia malayi.PLoS OnePoole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA.
2012Diagnosis of brugian filariasis by loop-mediated isothermal amplification.PLoS Negl Trop Dis.Poole CB, Zhang Y, Evans TC Jr., Carlow CK
2012Diagnosis of Brugian Filariasis by Loop-Mediated Isothermal AmplificationPLOS Negl Trop DisPoole, C., Tanner, N. Zhang, Y., Evans, T. and Carlow, C.
2010“Cloning and bioinformatic identification of small RNAs in the filarial nematode,  Brugia malayi”.Mol.Biochem.Parasitol.Poole, C.B.,   Davis, P.J.,  Jin, J.and McReynolds, L.A.
1992Cloning of a cuticular antigen that contains multiple tandem repeats from the filarial parasite Dirofilaria immitis.Proc.Natl.Acad.Sci.USAPoole, C.B., Grandea, A.G., III, Maina, C.V., Jenkins, R.E., Selkirk, M.E., and McReynolds, L.A.
1996Carboxy-terminal sequence divergence and processing of the polyprotein antigen from Dirofilaria immitis1.Mol.Biochem.Parasitol.Poole, C.B., Hornstra, L.J., Benner, J.S., Fink, J.R., and McReynolds, L.A.
2003Cloning and Biochemical Characterization of Blisterase, a Subtilisin-like Convertase from the Filarial Parasite, Onchocerca volvulus.J.Biol.Chem.Poole, C.B., Jin, J.and McReynolds, L.A.
2007Subtilisin-like proteases in nematodes.Mol.Biochem.Parasitol.Poole, C.B., Jin, J.and McReynolds, L.A.
2017​Colorimetric tests for diagnosis of filarial infection and vector surveillance using non-instrumented nucleic acid loop-mediated isothermal amplification (NINA-LAMP).PLoS OnePoole, C.B., Li, Z., Alhassan, A., Guelig, D., Diesburg, S., Tanner, N.A., Zhang, Y., Evans, T.C. Jr., LaBarre, P., Wanji, S., Burton R.A. and Carlow, C.K.
2008Single-process expression and purification of multiple recombinant protein through cocultivation and affinity purification.Anal.Biochem.Porte, M.and Chong, S.
1994VISA: Visual Sequence Analysis for the comparison of multiple amino acid sequences.CABIOSPosfai, J., Szaraz, Z., and Roberts, R.J.
2017Examining Sources of Error in PCR by Single-Molecule Sequencing.PLoS ONEPotapov Vladamir, Ong Jennifer L
2008CXXC domain of human DNMT1 is essential for enzymatic activity.BiochemistryPradhan, M., Estève, P.O., Chin, H.G., Samaranayke, M., Kim, G.D.and Pradhan, S.
2000Hybrid mouse-prokaryotic DNA (Cytosine-5) methyltransferase retain the specificity of the parental C-terminal domain.EMBO J.Pradhan, S and Roberts, R.J.
1999Recombinant Human DNA (Cytosine-5) Methyltransferase.I.expression, purification, and comparison of de novo and maintenance.J.Biol.Chem.Pradhan, S., Bacolla, A., Wells, R.D.and Roberts, R.J.
2009SET7/9 mediated methylation of non-histone proteins in mammalian cells.EpigeneticsPradhan, S., Chin, H.G., Esteve, P.O.and Jacobsen, S.E.
1998Isolation, Characterization and Baculovirus-Mediated Expression of the cDNA Encoding Cytosine DNA Methyltransferase from Pisum Sativum.Nuc.Acids Res.Pradhan, S., Cummings, M., Roberts, R.J.and Adams, R.L.P.
1995CG and CNG methyltransferase in plantsGenePradhan, S., Houlston, C., Cummings, M., Adams, R.L.P.
1997Baculovirus-Mediated Expression and Characterization of the Full-Length Murine DNA Methyltransferase.Nuc.Acids Res.Pradhan, S., Talbot, D., Sha, M., Benner, J., Hornstra, L., Li, E., Jaenisch, R.and Roberts, R.J.
1999Effect of CWG methylation on expression of plant genes.Biochem J.Pradhan, S., Urwin, N.A., Jenkins, G.I.and Adams, R.L.
2003Allosteric Activator Domain of Maintenance Human DNA (Cytosine-5) Methyltransferase and Its Role in Methylation Spreading.BiochemistryPradhan, S.and Esteve P.-O.
2003Mammalian DNA (cytosine-5) methyltransferases and their expression.Clin.Immunol.Pradhan, S.and Esteve P.-O.
2002The retinoblastoma gene product interacts with maintenance human DNA (Cytosine-5) methyltransferase and modulates its activity.EMBO J.Pradhan, S.and Kim, G.-D.
2015Cell- and Protein-Directed Glycosylation of Native Cleaved HIV-1 Envelope.J VirolPritchard L.K., Harvey D.J., Bonomelli C., Crispin M., Doores K.J.
2006Post-translational covalent labeling reveals heterogeneous mobility of individual G protein-coupled receptors in living cellsChemBioChem Prummer M. et al.
2001Detection of Serum IgG Antibodies Specific for Wolbachia Surface Protein in Rhesus Monkeys Infected with Brugia malayi.J Infectious Diseases Punkosdy, G.A., Dennis, V.A., Lasater, B.L., Tzertzinis, G.foster, J.M.and Lammie, P.J.
2016Host-Associated Genomic Features of the Novel Uncultured Intracellular Pathogen Ca. Ichthyocystis Revealed by Direct Sequencing of Epitheliocysts.Genome Biol. Evol.Qi, W. et al.
2003A Dual Role for an Aspartic Acid in Glycosylasparaginase Autoproteolysis.StructureQian, X., Guan, C.and Guo, H.-C.
1984A type II restriction endonuclease with an eight nucleotide specificity from Streptomyces fimbriatus.Nucl.Acids.Res.Qiang, B.Q., and Schildkraut, I.
1986Two unique restriction endonucleases from Neisseria lactamica.Nucl.Acids Res.Qiang, B.Q., and Schildkraut, I.
1987NotI and SfiI: restriction endonucleases with octanucleotide recognition sequences.Methods Enzymol.Qiang, B.-Q., and Schildkraut, I.
2016RAD mapping reveals an evolving, polymorphic and fuzzy boundary of a plant pseudoautosomal region.Mol Ecol. Qiu S, Bergero R, Guirao-Rico S, Campos JL, Cezard T, Gharbi K, Charlesworth D.
2016RAD mapping reveals an evolving polymorphic and fuzzy boundary of a plant pseudoautosomal regionMol Ecol. Qiu S, Bergero R, Guirao-Rico S, Campos JL, Cezard T, Gharbi K, Charlesworth D.
1992Characterization of a muscle-associated antigen from Wuchereria bancrofti.Exp.Parasitol.Raghavan, N., Maina, C.V., Fitzgerald, P.C., Tuan, R.S., Slatko, B.E., Ottesen, E.A., and Nutman, T.B.
1991Characterization of a recombinant clone of Wuchereria bancrofti with specificity for human lymphatic filarial parasites.Mol.Biochem.Parasitol.Raghavan, N., McReynolds, L.A., Maina, C.V., Feinstone, S.M., Jayaraman, K., Ottesen, E., and Nutman, T.B.
1999Protein-Modulated DNA Electron Transfer.J.Am.Chem.Soc.Rajski, S.R., Kumar, S., Roberts, R.J.and Barton, J.K.
2003Structure of Rab GDP-dissociation inhibitor in complex with prenylated YPT1 GTPaseScienceRak, A., et al.
1993McrBC, a novel multisubunit GTP-dependent restriction endonuclease.J.Cell Biochem.Suppl.Raleigh, E., Dila, D., Sutherland, E., Kelleher, J., Moran, L., Slatko, B., and Briggs, P.
1987Restriction and modification in vivo by Escherichia coli K12Methods Enzymol.Raleigh, E.A.
1992Organization and function of the mcrBC genes of Escherichia coli K-12.Mol.Microbiol Raleigh, E.A.
2013Abortive TransductionBrenner's Encyclopedia of GeneticsRaleigh, E.A.
2013Bacterial GenesBrenner's Encyclopedia of GeneticsRaleigh, E.A.
2013ConjugationBrenner's Encyclopedia of GeneticsRaleigh, E.A. and Low, K.B.
1986Escherichia coli K-12 restricts DNA containing 5-methylcytosine.Proc.Natl.Acad.Sci.USA Raleigh, E.A., and Wilson, G.
1991Nomenclature relating to restriction of modified DNA in Escherichia coli.J.Bacteriol.Raleigh, E.A., Benner, J., Bloom, F., Braymer, H.D., DeCruz, E., Dharmalingam, K., Heitman, J., Noyer-Weidner, M., Piekarowicz, A., Kretz, P.L., Short, J.M., and Woodcock, D.
1988McrA and McrB restriction phenotypes of some E.coli strains and implications for gene cloning.Nucl.Acids Res.Raleigh, E.A., Murray, N.E., Revel, H., Blumenthal, R.M., Westaway, D., Reith, A.D., Rigby, P.W.J., Elhai, J., and Hanahan, D.
1989Genetic and physical mapping of the mcrA (rglA) and mcrB (rglB) loci of Escherichia coli K-12.GeneticsRaleigh, E.A., Trimarchi, R., and Revel, H.
1998Restriction Modification Systems: Where They Are and What They Do.Bacterial Genomes Raleigh, E.A.and Brooks, J.E
2016mRNA capping: biological functions and applications. Nucleic Acids ResRamanathan, A., Robb, G.B. and Chan, S.H.
2013Identification of new proteins that modulate the germination of spores of bacillus speciesJ BacteriolRamirez-Peralta A, Gupta S, Butzin XY, Setlow B, Korza G, Leyva-Vazquez MA, Christie G, Setlow PGibson Assembly®
1999Mutations of endo-B-N-acetylglucosaminidase H active site residues Asp130 and Glu132: Activities and conformations.Protein Sci.Rao, V., Cui, T., Guan, C., and Van Roey, P.
1995Crystal structure of endo-beta-N-acetylglucosaminidase H at 1.9 A resolution: active-site geometry and substrate recognition.StructureRao, V., Guan, C., and Van Roey, P.
2015Contrasting genetic structure between mitochondrial and nuclear markers in the dengue fever mosquito from Rio de Janeiro: implications for vector control.Evol Appl. Rašić G, Schama R, Powell R, Maciel-de Freitas R, Endersby-Harshman NM, Filipović I, Sylvestre G, Máspero RC, Hoffmann AA.
2010BspRI restriction endonuclease: cloning, expression in E.coli and sequential cleavage mechanism.Nucleic Acids Research Advance Access Rasko, T., Der, A., Klement, E., Slaska-Kiss, K., Posfai, E., Medzihradsky, K.F., Marshak, D.R., Roberts, R.J., Kiss, A.
2009A single nucleotide polymorphism in the human serotonin transporter introduces a new site for N-linked glycosylationNeuropharmacology Rasmussen, T.N., Plenge, P., Bay, T., Egebjerg, J., Gether, U. Glycobiology
2008The Wolbachia endosymbiont of Brugia malayi has an active pyruvate phosphate dikinase.Mol.Biochem.Parasitol.Raverdy, S., Foster, J.M., Roopenian, E.and Carlow, C.K.
2007Molecular and biochemical characterization of nematode cofactor independent phosphoglycerate mutases.Mol.Biochem.Parasitol.Raverdy, S., Zhang, Y., Foster, J.and Carlow, C.
2007Acetamide selection of Kluyveromyces lactis cells transformed with an integrative vector leads to high frequency formation of multicopy strainsAppl. Environ. Microbiol.Read, J.D., Colussi, P.A., Ganatra, M.B. and Taron, C.H.
2007Acetamide Selection of Kluyveromyces lactis Cells Transformed with an Integrative Vector Leads to High Frequency Formation of Multicopy Strains.Appl.Environ.Microbiol.Read, J.D., Colussi, P.A., Ganatra, M.B.and Taron, C.H.
2005DNA -binding activity of LndI protein and temporal expression of the gene that upregulates landomycin E production in Streptomyces globisporus 1912Microbiology Rebets, Y., et al.
1988Cloning, purification and characterization of the HincII and HindII methyltransferases from Haemophilus influenzae.GeneRees, P.A., Nwankwo, D.O., Wilson, G.G., and Benner, J.S.
2005SNAP-tag mediated live cell labeling as an alternative to GFP in anaerobic organismsBioTechniques Regoes A. et al.
1991BfaI, a new MaeI isoschizomer from Bacteroides fragilis, recognizes the sequence 5' C^TAG 3'.Nucl.Acids Res.Reinecke, S.N., and Morgan, R.D.
2006A highly sensitive protein-protein interaction assay based onGaussia luciferase Nat. Methods Remy, I. and Michnick, S.W.
2006A highly sensitive protein-protein interaction assay based onGaussia luciferase Nat. Methods Remy, I. and Michnick, S.W.
2006A highly sensitive protein-protein interaction assay based on Gaussia luciferase.Nat. MethodsRemy. I. and Michnick, S.W.
2016Use of the Shuffle Strains in Production of Proteins.Curr Protoc Protein Sci.Ren, G., Ke, N. and Berkmen, M.
1990Cloning, characterization, and expression in Escherichia coli of the gene coding for the CpG DNA methylase from Spiroplasma sp.strain MQ1(M.SssI).Nucl.Acids Res.Renbaum, P., Abrahamove, D., Fainsod, A., Wilson, G.G., Rottem, S., and Razin, A.
2010Methods for detection and measurement of hydrogen peroxide inside and outside of cells Mol. Cells Rhee S. G. et al.
1997Detection and Isolation of Recombinant Protein Based on Binding Affinity ReporterMethods Mol.Biol.Riggs, P.
2000Expression and purification of recombinant proteins by fusion to maltose-binding protein.Mol.Biotechnol.Riggs, P.
2012Engineered derivatives of maltose-binding proteinProtein EngineeringRiggs, P.D.
2011Next-gen expression systemsRitter, A.
1994An amazing distortion in DNA induced by a methyltransferase (Nobel lecture)Angew.Chem.Int.Ed.Engl.Roberts, R.J.
1994An amazing distortion in DNA induced by a methyltransferase (Nobel lecture)Bioscience Reports Roberts, R.J.
1995On base flipping.CellRoberts, R.J.
1996Teaching About ScienceAccountability in ResearchRoberts, R.J.
2000The early days of bioinformatics publishingBioinformaticsRoberts, R.J.
2001PubMed Central: The GenBank of the Published Literature.Proc.Natl.Acad.Sci.Roberts, R.J.
2004Identifying protein function - a call for community action.PLoS BiologyRoberts, R.J.
2005How restriction enzymes became the workhorses of molecular biology.PNASRoberts, R.J.
2008HhaI methyltransferase flips its target base out of the DNA helix.Life IlluminatedRoberts, R.J.
2008Restriction and modification enzymes and their recognition sequences.Life IlluminatedRoberts, R.J.
2011COMBREX – COMputational BRidges to EXperiments.Biochem.Soc.Trans.Roberts, R.J.
2014A crime against humanity.China Policy ReviewRoberts, R.J.
2015Ten simple rules to win a nobel prizeRoberts, R.J.
2001REBASE-restriction enzymes and methylases.Nucl.Acids Res.Roberts, R.J., and Macelis, D.
2003A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes.Nucl.Acids Res.Roberts, R.J., Belfort, M.et al.
2004A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes.Nucleic Acids and Molecular BiologyRoberts, R.J., Belfort, M.et al.
2013The advantages of SMRT™ sequencing.  Genome Biology Roberts, R.J., Carneiro, M.O., Schatz, M.C.
2011COMBREX: a project to accelerate the functional annotation of prokaryotic genomesNucleic Acids Res.Roberts, R.J., Chang, Y.C., Hu, Z., Rachlin, J.N., Anton, B.P., Pokrzywa, R.M., Choi, H.P., Faller, L.L., Guleria, J., Housman, G., Klitgord, N., Mazumdar, V., McGettrick, M.G., Osmani, L., Swaminathan, R., Tao, K.R., Letovsky, S., Vitkup, D., Segre, D., Salzberg, S.L., Delisi, C., Steffen, M. and Kasif, S.,
2001Information access.Building a "GenBank" of the published literature.ScienceRoberts, R.J., Varmus, H.D., Ashburner, M., Brown, P.O., Eisen, M.B., Khosla, C., Kirschner, M., Nusse, R., Scott, M.and Wold, B.
2007Rebase--enzymes and genes for DNA restriction and modificationNucleic Acids ResRoberts, R.J., Vincze, T., Posfai, J., Macelis, D.
2010REBASE – a database for DNA restriction and modification: enzymes, genes and genomes.Nucl.Acids.Res.Roberts, R.J., Vincze, T., Posfai, J., Macelis, D.
2015A database for DNA restriction and modification: enzymes, genes and genomes. Nucleic Acids ResearchRoberts, R.J., Vincze, T., Posfai, J., Macelis, D.
2015REBASE - A database for DNA restriction and modification: enzymes, genes and genomesNucleic Acids ResRoberts, R.J., Vincze, T., Posfai, J., Macelis, D.
2014REBASE - A database for DNA restriction and modification: enzymes, genes and genomesNucleic Acids Research, Advance Access Roberts, R.J., Vincze, T., Posfai, J., Macelis, D.
2003REBASE Restriction enzymes and methyltransferases.Nucl.Acids Res.Roberts, R.J., Vincze, T., Posfai, J.and Macelis, D.
2005REBASE - restriction enzymes and DNA methyltransferases.Nucl.Acids.Res.Roberts, R.J., Vincze, T., Posfai, J.and Macelis, D.
1998Base Flipping.Annual Review Biochem.Roberts, R.J.and Cheng, X.
1993Type II Restriction EndonucleasesNucleasesRoberts, R.J.and Halford, S.E.
1993REBASE-restriction enzymes and methylases.Nucl.Acids Res.Roberts, R.J.and Macelis, D.
1993The Restriction EnzymesNucleasesRoberts, R.J.and Macelis, D.
1994REBASE - restriction enzymes and methylasesNucl.Acids.Res.Roberts, R.J.and Macelis, D.
1996REBASE--restriction enzymes and methylases.Nucl.Acids Res.Roberts, R.J.and Macelis, D.
1997REBASE-restriction enzymes and methylases.Nucl.Acids Res.Roberts, R.J.and Macelis, D.
1998REBASE-restriction enzymes and methylases.Nucl.Acids Res.Roberts, R.J.and Macelis, D.
1999REBASE-restriction enzymes and methylases.Nucl.Acids Res.Roberts, R.J.and Macelis, D.
2000REBASE-restriction enzymes and methylases.Nucl.Acids Res.Roberts, R.J.and Macelis, D.
2011Engineering BL21(DE3) derivative strains to minimize Escherichia coli protein contamination after IMAC purification.Appl. Environ. Microbiol.Robichon, C., Luo, J., Causey, T.B., Benner, J.S. and Samuelson, J.C.
2011Engineering BL21(DE3) derivative strains to minimize Escherichia coli protein contamination after IMAC purification.Appl.Environ.Microbiol.Robichon, C., Luo, J., Causey, T.B., Benner, J.S.and Samuelson, J.C.
2015Efficient expression of full-length antibodies in the cytoplasm of engineered bacteriaNat Commun.Robinson MP, Ke N, Lobstein J, Peterson C, Szkodny A, Mansell TJ, Tuckey C, Riggs PD, Colussi PA, Noren CJ, Taron CH, DeLisa MP, Berkmen M.
2001Restriction endonucleases. In: Molecular biology problem solverWiley-Liss, Inc.Robinson, D., Walsh, P.R., Bonventre, J.A.
2015Efficient expression of full-length antibodies in the cytoplasm of engineered bacteriaNature Communications Robinson, M.-P., Ke, N., Lobstein, J., Peterson, C., Szkodny, A., Mansell, T.J., Tuckey, C., Riggs, P.D., Colussi, P.A., Noren, C.J., Taron, C.H., Delisa, M.P., Berkmen, M.
2005Explosive Lineage-Specific Expansion of the Orphan Nuclear Receptor HNF4 in Nematodes.J Mol Evol.Robinson-Rechavi, M, Maina, C.V., Gissendanner, C.R., Laudet, V., Sluder, A.
2011Heterologous expression of a thermophilic esterase in Kluyveromyces yeastsAppl. Microbiol. Biotechnol.Rocha S.N., et al.
2010Heterologous expression of glucose oxidase in the yeastKluyveromyces marxianusMicrob. Cell Fact.Rocha, S.N., et al.
2009 Development of a dual luciferase TrAC Trends in Analytical Chemistry Roda, A., Guardigli, M., Michelini, E. and Mirasoli, M.
2009Bioluminescence in analytical chemistry and in vivo imagingTrAC Trends in Analytical ChemistryRoda, A., Guardigli, M., Michelini, E., Mirasoli, M.
1994Organization and sequence of the SalI restriction-modification system.GeneRodicio, M.R., Quinton-Jager, T., Moran, L.S., Slatko, B.E., and Wilson, G.G.
2004Semisynthesis of a segmental isotopically labeled protein splicing precursor: NMR evidence for an unusual peptide bond at the N-extein-intein junctionProc. Natl. Acad. Sci. USARomanelli, A., et al.
2014Phosphorylation decreases ubiquitylation of the thiazide-sensitive cotransporter NCC and subsequent clathrin-mediated endocytosisJ Biol ChemRosenbaek LL, Kortenoeven ML, Aroankins TS, Fenton RAGlycobiology
2014Mutations in four glycosyl hydrolases reveal a highly coordinated pathway for rhodopsin biosynthesis and N-glycan trimming in Drosophila melanogasterPLoS GenetRosenbaum EE, Vasiljevic E, Brehm KS, Colley NJGlycobiology
2013Quantifying Elongation Rhythm during Full-Length Protein SynthesisRosenblum G, Chen C, Kaur J, Cui X, Zhang H, Asahara H, Chong S, Smilansky Z, Goldman YE, Cooperman BS.
2011Engineering a waste management enzyme to overcome cancer resistance to apoptosis: adding DNase1 to the anti-cancer toolbox Cancer Gene Ther. Rosner, K., Kasprzak, M.F., Horenstein, A.C., Thurston, H.L., Abrams, J., Kerwin, L.Y., Mehregan, D.A. and Mehregan, D.R.
2015The mRNA decay factor PAT1 functions in a pathway including MAP kinase 4 and immune receptor SUMM2Roux, M.E., Rasmussen, M.W., Palma, K., Lolle, S., Regue, A.M., Bethke, G., Glazebrook, J., Zhang, W., Sieburth, L., Larsen, M.R., Mundy, J., Petersen, M.
2016Perpetuating the homing endonuclease life cycle: identification of mutations that modulate and change I-TevI cleavage preferenceNucleic Acids Res.Roy, A.C., Wilson, G.G. and Edgell, D.R.
2016Perpetuating the homing endonuclease life cycle: identification of mutations that modulate and change I-TevI cleavage preference.Nucleic Acids Res.Roy, A.C., Wilson, G.G. and Edgell, D.R.
2014Transcriptomic analysis of carboxylic acid challenge in Escherichia coli: beyond membrane damagePLoS OneRoyce LA, Boggess E, Fu Y, Liu P, Shanks JV, Dickerson J, Jarboe LRGibson Assembly®
1997Overexpression of BsoBI restriction endonuclease in E.coli, purification of the recombinant BsoBI, and identification of catalytic residues of BsoBI by random mutagenesis.GeneRuan, H., Lunnen, K.D., Pelletier, J.J., and Xu, S.Y.
1996Cloning and sequence comparison of AvaI and BsoBI restriction-modification systems.Mol.Gen.Genet.Ruan, H., Lunnen, K.D., Scott, M.E., Moran, L.S., Slatko, B.E., Pelletier, J.J., Hess, E.J., Benner, J., Wilson, G.G., and Xu, S.Y.
2008Gaussia-luciferase as a sensitive reporter gene for monitoring promoter activity in the nucleus of the green algaChlamydomonas reinhardtii Mol. Genet. Genomics. Ruecker, O., Zillner, K., Groebner-Ferreira, R. and Heitzer, M.
2010Fura-2FF-based calcium indicator for protein labeling Org. Biomol. Chem. Ruggiu A. A. et al.
2015RAD sequencing and genomic simulations resolve hybrid origins within North American Canis.Bio Lett.Rutledge LY, Devillard S, Boone JQ, Hohenlohe PA, White BN.
2011Characterization of the single-cell transcriptional landscape by highly multiplex RNA-seq Genome Res. Saiful, I., Kjällquist, U., Moliner, A. et al
2008Ribosomal Synthesis of Peptidase-Resistant Peptides Closed by a Nonreducible Inter-Side-Chain BondACS Chem. Biol.  Sako, Y., Goto, Y., Murakami, H., and Suga, H.
2014Multiplex genome engineering in human cells using all-in-one CRISPR/Cas9 vector systemSci RepSakuma T, Nishikawa A, Kume S, Chayama K, Yamamoto TGolden Gate Assembly
2003Coevolution of an aminoacyl-tRNA synthetase with its tRNA substratesProc. Natl. Acad. Sci. USASalazar, J.C., et al.
2011Branched Intermediate Formation is the Slowest Step in th Protein Splicing Reaction of the Ala1 KbA Intein from Methanococcus jannaschiiSaleh, L., Southworth, M.W., Considine, N., O'Neill, C., Benner, J., Bollinger, J.M. and Perler, F.B.
2006Protein splicing in cis and in trans.The Chemical Record Saleh, L.and Perler, F.B.
2011Tuned Escherichia coli as a host for the expression of disulfide-rich proteinsBiotechnology JournalSalinas, G., Pellizza, L., Margenat, M., et al.
2009Human condensin function is essential for centromeric chromatin assembly and proper sister kinetochore orientationPLoS One Samoshkin A. et al.
2011"Recent Developments in Difficult Protein Expression: A Guide to E.coli strains, Promoters and Relevant Host Mutations" editors Tom C.Evans Jr.and Ming-Qun Xu, Humana PressMethods Mol.Biol.Samuelson, J.C.
"Bacterial Systems" introduction of Membrane Proteins - Strategies for Expression and IsolationSamuelson, J.C.
2011Recent developments in difficult protein expression: A guide to E. colistrains, promoters, and relevant host mutations. Methods in Molecular Biology Samuelson, J.C.
2012Disulfide-bonded protein expression in E. coliGenetic Engineering & Biotechnology NewsSamuelson, J.C., Causey, T.B., and Berkmen, M.
2006Engineering a rare-cutting restriction enzyme: genetic screening and selection of NotI variants.NAR Samuelson, J.C., Morgan, R.D., Benner, J.S., Claus, T.E., Packard, S.L.and Xu, S.Y.
2004The isolation of strand-specific nicking endonucleases from a randomized SapI expression library.Nucl.Acids Res.Samuelson, J.C., Zhu, Z.and Xu, S.Y.
2002Directed Evolution of Restriction Endonuclease BstYI to Achieve Increased Substrate Specificity.J.Mol.Biol.Samuelson, J.C.and Xu, S.Y.
2015Real-Time Sequence-Validated Loop-Mediated Isothermal Amplification Assays for Detection of Middle East Respiratory Syndrome Coronavirus (MERS-CoV).PLoS OneSanchita Bhadra, Yu Sherry Jiang, Mia R Kumar, Reed F Johnson, Lisa E Hensley, Andrew D EllingtonIsothermal Amplification
1994Histone-encoding genes from Pyrococcus: evidence for members of the HMf family of archaeal histones in a non-methanogenic Archaeon*.Gene Sandman, K., Perler, F.B., and Reeve, J.N.
2000Phage Display of Selenopeptides.J.Amer.Chem.Soc.Sandman, K.E., Benner, J.S.and Noren, C.J.
2003Revised Escherichia coli selenocysteine insertion requirements determined by in vivo screening of combinatorial libraries of SECIS variants.Nucl.Acids Res.Sandman, K.E., Tardiff, D.F., Neely, L.A.and Noren, C.J.
2000The efficiency of Escherichia coli selenocysteine insertion is influenced by the immediate downstream nucleotide.Nucl.Acids Res.Sandman, K.E.and Noren, C.J.
2005A small-molecule-based approach to sense codon-templated natural-unnatural hybrid peptides. Selective silencing and reassignment of the sense codon by orthogonal reacylation stalling at the single-codon levelJ. Am. Chem. Soc.Sando, S., Kanatani, K., Sato, N., Matsumoto, H. Hohsaka, T. and Aoyama, Y.
2009Sensitive in vivo imaging of T cells using membrane-bound gaussia princeps luciferaseNat. Med. Santos, E., Yeh, R., Lee, J., et al.
2009Sensitive in vivo imaging of T cells using membrane-bound gaussia princeps luciferaseNat. Med.Santos, E., Yes, R., Lee, J., et al
2013The role of the methyltransferase domain of bifunctional restriction enzyme RM.BpuSI in cleavage activityPLOS ONE Sarrade-Loucheur, A., Xu, S-Y. and Chan, S-H.
2009 Assessment of therapeutic efficacy and fate of engineered human mesenchymal stem cells for cancer therapy Proc. Natl. Acad. Sci. USA Sasportas, L.S., Kasmieh, R., Wakimoto, H., Hingtgen, S., van de Water, J.A., Mohapatra, G., Figueiredo, J.L., Martuza, R.L., Weissleder, R. and Shah, K.
2009Assessment of therapeutic efficacy and fate of engineered human mesenchymal stem cells for cancer therapyProc. Natl. Acad. Sci. USASasportas, L.S., Kasmieh, R., Wakimoto, H., Hingtgen, S., van de Water, J.A., Mohapatra, G., Figueiredo, J.L., Martuza, R.L., Weissleder, R., Shah, K.
2011A phage-targeting startegy for the design of spatiotemporal drug delivery from grafted matricesFibrogenesis Tissue RepairSawada, R. et al.
2005Crystal structure of the restriction-modification system control element C.BclI and mapping of its binding site.StructureSawaya, M.R., Zhu, Z., Fana, M., Chan, S.H., Dabur, R., Xu, S.Y.and Balendiran, G.K.
2012Uptake of radiolabeled GIcNAc into Saccharomyces cerevisiae via native hexose transporters and its in vivo incorporation into GPI precursors in cells expressing heterologous GIcNAc kinaseFEMS Yeast ResScarcelli, J.J., Colussi, P.A., Fabre, A.L., Boles, E., Orlean, P., Taron, C.H.
2011Uptake of radiolabeled GlcNAc into Saccharomyces cerevisiae via native hexose transporters and its in vivo incorporation into GPI precursors in cells expressing heterologous GlcNAc kinase.REMS Yeast ResScarcelli, J.J., Colussi, P.A., Fabre, A.L., Boles, E., Orlean, P.and Taron, C.H.
2003Assembly of high-affinity insulin receptor agonists and antagonists from peptide building blocksProc. Natl. Acad. Sci. USASchaffer, L., et al.
2003Merging fluorescence resonance energy transfer and expressed protein ligation to analyze protein-protein interactionsAnal. Biochem. Scheibner, K.A., Zhang, Z. and Cole, P.A.
2015Pre-Steady-State Kinetic Analysis of a Family D DNA Polymerase from Thermococcus sp. 9°N Reveals Mechanisms for Archaeal Genomic Replication and MaintenanceJ Biol ChemSchermerhorn KM, Gardner AF
2015Pre-steady-state Kinetic Analysis of a Family D DNA Polymerase from Thermococcus sp. 9°N Reveals Mechanisms for Archaeal Genomic Replication and MaintenanceJ Biol ChemSchermerhorn KM, Gardner AF.
2016High-temperature single-molecule kinetic analysis of thermophilic archaeal MCM helicasesNucleic Acids Res.Schermerhorn, K.M., Tanner, N., Kelman, Z. and Gardner, A.F.
1984Screening for and characterizing restriction endonucleasesGenetic EngineeringSchildkraut, I.
1993Compilation of Commercially Available NucleasesNucleasesSchildkraut, I.
1984The cleavage site for the restriction endonuclease EcoRV is 5'-GAT^ATC-3'.GeneSchildkraut, I., Banner, C.D.B., Rhodes, C.S., and Parekh, S.
1987The cleavage site for the restriction endonucleases BanI and HgiCI is 5' ...G^GPyPuCC ...3'.Nucl.Acids Res.Schildkraut, I., Lynch, J., and Morgan, R.
2010Revolutionizing membrane protein overexpression in bacteria Micro. Biotech. Schlegel, S., Klepsch, M., Gialama, D., Wickström, D., Slotboom, D.J. and de Gier, J.
2014Colonization state influences the hemocyte proteome in a beneficial squid-Vibrio symbiosisMol Cell ProteomicsSchleicher, T.R., VerBerkmoes, N.C., Shah, M., Nyholm, S.V.
1995A model for DNA binding and enzyme action derived from crystallographic studies of the TaqI N6-adenine-methyltransferase.GeneSchluckebier, G., Labahn, J., Granzin, J., Schildkraut, I., and Saenger, W.
2007Selecting targeting of adenoviral vectors to neural precursor cells in the hippocampus of adult mice: new prospects for in situ gene therapyStem CellsSchmidt, A. et al.
2009ChIP-seq: Using high-throughput sequencing to discover protein-DNA interactionsMethods Schmidt, D., Wilson, M.D. Spyrou, C., Brown, G.D., Hadfield, J. and Odom, D.T.