Transformation Protocol (C2925)


For C2925H, perform steps 1-7 in the tube provided.


  1. For C2925H: Thaw a tube of Competent E. coli cells on ice for 10 minutes.  
    For C2925I: Thaw a tube of dam-/dcm- Competent E. coli cells on ice until the last ice crystals disappear. Mix gently and carefully pipette 50 µl of cells into a transformation tube on ice.
  2. Add 1-5 µl containing 100 pg-1 µg of plasmid DNA to the cell mixture. Carefully flick the tube 4-5 times to mix cells and DNA. Do not vortex. 
  3. Place the mixture on ice for 30 minutes. Do not mix. 
  4. Heat shock at exactly 42°C for exactly 30 seconds. Do not mix. 
  5. Place on ice for 5 minutes. Do not mix. 
  6. Pipette 950 µl of room temperature SOC into the mixture. 
  7. Place at 37°C for 60 minutes. Shake vigorously (250 rpm) or rotate. 
  8. Warm selection plates to 37°C. 
  9.  Mix the cells thoroughly by flicking the tube and inverting.
  10. Spread 50-100 µl onto a selection plate. To produce more colonies on one plate, spin down the mixture at 4,000 rpm x 10 minutes at room temperature. Discard 900 µl of the supernatant and resuspend the pellet in the remaining 100 µl of supernatant. Spread 95 µl onto one plate and another 5 µl mixed with 90 µl of LB onto another plate.
  11. Incubate overnight at 37°C. Alternatively, incubate at 30°C for 24-36 hours or at 25°C for 48 hours.
Transformation Protocol Variables
Thawing: Cells are best thawed on ice and DNA added as soon as the last bit of ice in the tube disappears. Cells can also be thawed by hand, but warming above 0°C will decrease the transformation efficiency.

Incubation of DNA with Cells on Ice: For maximum transformation efficiency, cells and DNA should be incubated together on ice for 30 minutes. Expect a 2-fold loss in transformation efficiency for every 10 minutes this step is shortened.

Heat Shock: Both the temperature and the timing of the heat shock step are important and specific to the transformation volume and vessel. Using the transformation tube provided, 30 seconds at 42°C is optimal.

Outgrowth: Outgrowth at 37°C for 1 hour is best for cell recovery and for expression of antibiotic resistance. Expect a 2-fold loss in transformation efficiency for every 15 minutes this step is shortened. SOC gives 2-fold higher transformation efficiency than LB medium; and incubation with shaking or rotating the tube gives 2-fold higher transformation efficiency than incubation without shaking.

Plating: Selection plates can be used warm or cold, wet or dry without significantly affecting the transformation efficiency. However, warm, dry plates are easier to spread and allow for the most rapid colony formation.

* Ideally, DNA for transformation should be purified and resuspended in water or TE. However, up to 10 µl of DNA directly from a ligation mix can be used with only a two-fold loss of transformation efficiency. Where it is necessary to maximize the number of transformants (e.g. a library), a purification step, either a spin column or phenol/chloroform extraction and ethanol precipitation should be added.