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The table below summarizes the frequencies with which restriction endonuclease sites occur in commonly
used DNA molecules. Detailed restriction maps can be found on DNA sequences and
maps.
The sites listed in these tables were identified by computer analysis of published sequences. Although we have tried
to ensure their accuracy, the sites have not necessarily been confirmed by experimentation. When the same specificity
is displayed by several enzymes, the site is listed by the name of the enzyme that is available from New England Biolabs.
Other enzymes with the same specificity are listed in the table of isoschizomers.
Recognition sequences are written 5´ to 3´.
A | B | C | D | E | F | H | K | L | M | N | P | R | S | T | X | Z |
| Enzyme |
Sequence |
Adeno-2 |
LITMUS
28i |
pBR
322 |
pGLuc-
Basic |
pMAL-
p5X |
pTXB1 |
pUC19 |
| Lambda |
M13
mp18 |
pGLuc-
Basic2 |
pKLAC2 |
pSNAPf |
pTYB
21 |
T7 |
| AatII | GACGTC | 3 | 10 | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 5 | 1 | 0 | 1 | 1 | | Acc65I | GGTACC | 8 | 2 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 2 | 0 | 1 | 1 | 5 | | AccI | GTMKAC | 17 | 9 | 0 | 1 | 2 | 3 | 3 | 5 | 1 | 2 | 5 | 3 | 1 | 33 | | AciI | CCGC | 582 | 516 | 27 | 42 | 67 | 66 | 64 | 81 | 80 | 75 | 102 | 92 | 34 | 199 | | AclI | AACGTT | 3 | 7 | 3 | 2 | 4 | 2 | 2 | 2 | 5 | 3 | 12 | 9 | 2 | 19 | | AcuI | CTGAAG | 23 | 40 | 2 | 0 | 2 | 9 | 4 | 8 | 4 | 5 | 2 | 2 | 2 | 1 | | AfeI | AGCGCT | 13 | 2 | 0 | 1 | 4 | 0 | 0 | 0 | 2 | 0 | 1 | 2 | 0 | 0 | | AflII | CTTAAG | 4 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 19 | | AflIII | ACRYGT | 25 | 20 | 1 | 3 | 1 | 5 | 1 | 4 | 2 | 5 | 3 | 4 | 1 | 23 | | AgeI | ACCGGT | 5 | 13 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 2 | | AgeI-HF™ | ACCGGT | 5 | 13 | 1 | 0 | 0 | - | 0 | 1 | 0 | - | 1 | 0 | 0 | 2 | | AhdI | GACNNNNNGTC | 9 | 9 | 2 | 0 | 1 | 1 | 2 | 1 | 2 | 1 | 2 | 2 | 1 | 14 | | AleI | CACNNNNGTG | 10 | 20 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 2 | 0 | 8 | | AluI | AGCT | 158 | 143 | 15 | 27 | 17 | 31 | 25 | 38 | 28 | 27 | 30 | 34 | 16 | 140 | | AlwI | GGATC | 35 | 58 | 10 | 3 | 12 | 21 | 20 | 18 | 12 | 20 | 15 | 16 | 10 | 1 | | AlwNI | CAGNNNCTG | 25 | 41 | 1 | 1 | 1 | 2 | 2 | 5 | 2 | 4 | 1 | 2 | 1 | 15 | | ApaI | GGGCCC | 12 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | | ApaLI | GTGCAC | 7 | 4 | 2 | 0 | 3 | 2 | 3 | 3 | 6 | 4 | 4 | 4 | 3 | 1 | | ApeKI | GCWGC | 179 | 199 | 9 | 10 | 21 | 22 | 23 | 27 | 25 | 20 | 27 | 29 | 12 | 116 | | ApoI | RAATTY | 29 | 58 | 3 | 11 | 0 | 3 | 3 | 19 | 5 | 3 | 5 | 7 | 1 | 13 | | AscI | GGCGCGCC | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | | AseI | ATTAAT | 3 | 17 | 1 | 7 | 1 | 4 | 4 | 5 | 4 | 7 | 10 | 4 | 3 | 12 | | AsiSI | GCGATCGC | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | AvaI | CYCGRG | 40 | 8 | 2 | 2 | 1 | 2 | 3 | 2 | 1 | 2 | 3 | 1 | 1 | 4 | | AvaII | GGWCC | 73 | 35 | 2 | 1 | 8 | 4 | 3 | 7 | 9 | 6 | 6 | 8 | 2 | 54 | | AvrII | CCTAGG | 2 | 2 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 3 | | BaeGI <top> | GKGCMC | 45 | 10 | 2 | 1 | 3 | 4 | 5 | 8 | 8 | 8 | 6 | 5 | 3 | 16 | | BaeI | ACNNNNGTAYC | 5 | 10 | 1 | 3 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 3 | | BamHI | GGATCC | 3 | 5 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | | BamHI-HF™ | GGATCC | 3 | 5 | 1 | 1 | 1 | - | 1 | 1 | 1 | - | 1 | 1 | 1 | 0 | | BanI | GGYRCC | 57 | 25 | 4 | 7 | 9 | 7 | 6 | 7 | 4 | 8 | 8 | 12 | 4 | 33 | | BanII | GRGCYC | 57 | 7 | 2 | 2 | 2 | 5 | 6 | 5 | 2 | 5 | 3 | 6 | 1 | 1 | | BbsI | GAAGAC | 27 | 24 | 0 | 0 | 3 | 2 | 1 | 3 | 3 | 2 | 4 | 4 | 0 | 38 | | BbvCI | CCTCAGC | 9 | 7 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 10 | | BbvI | GCAGC | 179 | 199 | 9 | 10 | 21 | 22 | 23 | 27 | 25 | 20 | 27 | 29 | 12 | 116 | | BccI | CCATC | 62 | 145 | 5 | 14 | 9 | 25 | 11 | 22 | 16 | 8 | 14 | 25 | 3 | 121 | | BceAI | ACGGC | 80 | 115 | 3 | 7 | 3 | 7 | 5 | 13 | 11 | 8 | 13 | 10 | 2 | 47 | | BcgI | CGANNNNNNTGC | 10 | 28 | 1 | 0 | 3 | 1 | 1 | 6 | 4 | 1 | 4 | 6 | 1 | 19 | | BciVI | GTATCC | 9 | 26 | 2 | 0 | 2 | 4 | 4 | 3 | 4 | 3 | 4 | 4 | 2 | 23 | | BclI | TGATCA | 5 | 8 | 0 | 0 | 0 | 2 | 1 | 2 | 2 | 1 | 1 | 2 | 0 | 1 | | BcoDI | GTCTC | 60 | 37 | 3 | 5 | 3 | 9 | 3 | 11 | 8 | 4 | 8 | 9 | 4 | 95 | | BfaI | CTAG | 54 | 13 | 7 | 5 | 5 | 12 | 10 | 19 | 3 | 14 | 8 | 8 | 4 | 60 | | BfuAI | ACCTGC | 39 | 41 | 0 | 3 | 1 | 5 | 4 | 5 | 4 | 4 | 2 | 3 | 1 | 18 | | BfuCI | GATC | 87 | 116 | 16 | 6 | 22 | 38 | 33 | 35 | 23 | 31 | 24 | 29 | 15 | 6 | | BglI | GCCNNNNNGGC | 20 | 29 | 2 | 1 | 3 | 1 | 1 | 3 | 1 | 7 | 2 | 3 | 2 | 2 | | BglII | AGATCT | 11 | 6 | 1 | 1 | 0 | 3 | 1 | 1 | 1 | 2 | 0 | 2 | 0 | 1 | | BlpI | GCTNAGC | 8 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 20 | | BmgBI | CACGTC | 15 | 17 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 8 | | BmrI | ACTGGG | 22 | 4 | 2 | 1 | 5 | - | 3 | 2 | 5 | - | 11 | 8 | 2 | 6 | | BmtI | GCTAGC | 4 | 1 | 0 | 0 | 1 | 0 | 0 | 4 | 0 | 1 | 1 | 1 | 0 | 1 | | BpmI | CTGGAG | 32 | 25 | 1 | 2 | 4 | 6 | 4 | 3 | 4 | 1 | 5 | 6 | 1 | 23 | | Bpu10I | CCTNAGC | 23 | 19 | 0 | 4 | 1 | 0 | 0 | 0 | 1 | 2 | 0 | 2 | 0 | 39 | | BpuEI | CTTGAG | 19 | 13 | 4 | 4 | 6 | 6 | 6 | 7 | 5 | 9 | 7 | 9 | 4 | 56 | | BsaAI | YACGTR | 22 | 14 | 2 | 5 | 1 | 4 | 2 | 4 | 0 | 3 | 2 | 4 | 0 | 35 | | BsaBI | GATNNNNATC | 2 | 21 | 0 | 2 | 1 | 4 | 2 | 2 | 2 | 1 | 1 | 3 | 0 | 7 | | BsaHI | GRCGYC | 44 | 40 | 2 | 1 | 6 | 5 | 5 | 6 | 5 | 8 | 12 | 7 | 3 | 8 | | BsaI | GGTCTC | 18 | 2 | 1 | 0 | 1 | 1 | 1 | 3 | 2 | 2 | 2 | 2 | 1 | 29 | | BsaI-HF™ | GGTCTC | 18 | 2 | 1 | 0 | 1 | - | 1 | 3 | 2 | - | 2 | 2 | 1 | 29 | | BsaJI | CCNNGG | 234 | 105 | 6 | 9 | 8 | 16 | 21 | 18 | 10 | 17 | 15 | 15 | 5 | 85 | | BsaWI | WCCGGW | 28 | 81 | 4 | 6 | 5 | 4 | 4 | 8 | 7 | 5 | 8 | 6 | 3 | 32 | | BsaXI | ACNNNNNCTCC | 29 | 19 | 1 | 4 | 0 | 4 | 3 | 3 | 1 | 1 | 2 | 3 | 1 | 12 | | BseRI | GAGGAG | 63 | 19 | 0 | 1 | 0 | 2 | 1 | 2 | 0 | 3 | 0 | 0 | 0 | 13 | | BseYI | CCCAGC | 31 | 32 | 1 | 3 | 2 | 5 | 5 | 3 | 4 | 5 | 4 | 4 | 1 | 29 | | BsgI | GTGCAG | 34 | 41 | 0 | 0 | 1 | 1 | 3 | 4 | 6 | 3 | 5 | 4 | 0 | 21 | | BsiEI | CGRYCG | 50 | 22 | 4 | 3 | 7 | 6 | 7 | 11 | 8 | 6 | 9 | 8 | 5 | 17 | | BsiHKAI | GWGCWC | 38 | 28 | 4 | 3 | 8 | 6 | 8 | 8 | 9 | 9 | 7 | 7 | 5 | 24 | | BsiWI | CGTACG | 4 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | | BslI | CCNNNNNNNGG | 216 | 176 | 8 | 17 | 20 | 21 | 15 | 18 | 16 | 26 | 31 | 25 | 6 | 90 | | BsmAI | GTCTC | 60 | 37 | 3 | 5 | 3 | - | 3 | 11 | 8 | - | 8 | 10 | 4 | 95 | | BsmBI | CGTCTC | 21 | 14 | 1 | 1 | 1 | 2 | 0 | 2 | 2 | 0 | 2 | 2 | 2 | 16 | | BsmFI | GGGAC | 59 | 38 | 0 | 2 | 4 | 9 | 7 | 4 | 1 | 5 | 4 | 6 | 0 | 46 | | BsmI | GAATGC | 10 | 46 | 1 | 1 | 1 | 4 | 1 | 3 | 1 | 5 | 1 | 0 | 0 | 15 | | BsoBI | CYCGRG | 40 | 8 | 2 | 2 | 1 | 2 | 3 | 2 | 1 | 2 | 3 | 1 | 1 | 4 | | Bsp1286I | GDGCHC | 105 | 38 | 5 | 5 | 10 | 12 | 15 | 16 | 11 | 15 | 11 | 12 | 5 | 40 | | BspCNI | CTCAG | 75 | 80 | 4 | 24 | 7 | 10 | 8 | 10 | 10 | 9 | 20 | 16 | 5 | 142 | | BspDI | ATCGAT | 2 | 15 | 0 | 2 | 1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 3 | | BspEI | TCCGGA | 8 | 24 | 0 | 0 | 1 | 0 | 0 | 1 | 2 | 0 | 1 | 1 | 0 | 0 | | BspHI | TCATGA | 3 | 8 | 2 | 1 | 4 | 2 | 2 | 2 | 1 | 2 | 2 | 3 | 3 | 13 | | BspMI | ACCTGC | 39 | 41 | 0 | 3 | 1 | 5 | 4 | 5 | 4 | 4 | 2 | 3 | 1 | 18 | | BspQI | GCTCTTC | 7 | 10 | 0 | 0 | 1 | 3 | 3 | 2 | 1 | 3 | 1 | 1 | 1 | 4 | | BsrBI | CCGCTC | 28 | 17 | 3 | 4 | 2 | 6 | 7 | 6 | 4 | 6 | 9 | 5 | 3 | 17 | | BsrDI | GCAATG | 14 | 44 | 2 | 3 | 2 | 4 | 3 | 7 | 4 | 4 | 4 | 4 | 2 | 18 | | BsrFI | RCCGGY | 40 | 61 | 2 | 1 | 7 | 6 | 6 | 9 | 2 | 6 | 11 | 9 | 1 | 3 | | BsrGI | TGTACA | 5 | 5 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 2 | 0 | 13 | | BsrI | ACTGG | 86 | 110 | 11 | 19 | 18 | 17 | 14 | 23 | 26 | 19 | 32 | 28 | 11 | 118 | | BssHII | GCGCGC | 52 | 6 | 1 | 0 | 0 | 1 | 1 | 1 | 2 | 2 | 1 | 1 | 0 | 1 | | BssKI | CCNGG | 233 | 185 | 9 | 11 | 16 | 28 | 24 | 25 | 27 | 28 | 46 | 29 | 12 | 11 | | BssSI | CACGAG | 11 | 8 | 2 | 0 | 3 | 5 | 4 | 5 | 3 | 4 | 2 | 4 | 3 | 31 | | BstAPI | GCANNNNNTGC | 20 | 34 | 0 | 0 | 2 | 2 | 2 | 3 | 2 | 0 | 3 | 2 | 1 | 12 | | BstBI | TTCGAA | 1 | 7 | 1 | 0 | 0 | 1 | 1 | 2 | 0 | 0 | 0 | 1 | 0 | 7 | | BstEII | GGTNACC | 10 | 13 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | | BstNI | CCWGG | 136 | 71 | 5 | 7 | 6 | 19 | 14 | 15 | 14 | 19 | 19 | 14 | 5 | 2 | | BstUI | CGCG | 303 | 157 | 11 | 17 | 23 | 15 | 17 | 26 | 31 | 19 | 41 | 35 | 10 | 65 | | BstXI | CCANNNNNNTGG | 10 | 13 | 0 | 0 | 0 | 2 | 0 | 2 | 4 | 1 | 4 | 3 | 0 | 11 | | BstYI | RGATCY | 22 | 21 | 8 | 2 | 8 | 16 | 14 | 12 | 9 | 11 | 10 | 12 | 7 | 2 | | BstZ17I | GTATAC | 3 | 3 | 0 | 0 | 1 | 1 | 1 | 3 | 0 | 1 | 1 | 1 | 0 | 8 | | Bsu36I | CCTNAGG | 7 | 2 | 0 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 30 | | BtgI | CCRYGG | 82 | 46 | 1 | 2 | 2 | 2 | 7 | 4 | 3 | 6 | 1 | 4 | 0 | 26 | | BtgZI | GCGATG | 23 | 45 | 2 | 4 | 3 | 7 | 6 | 4 | 6 | 6 | 4 | 3 | 0 | 24 | | BtsCI | GGATG | 78 | 150 | 4 | 4 | 12 | 16 | 11 | 20 | 17 | 7 | 12 | 18 | 5 | 97 | | BtsI | GCAGTG | 22 | 34 | 2 | 1 | 2 | 4 | 5 | 7 | 5 | 5 | 4 | 4 | 3 | 20 | | BtsIMutI | CAGTG | - | - | - | - | - | - | - | - | - | - | - | - | - | - | | Cac8I <top> | GCNNGC | 285 | 238 | 12 | 28 | 31 | 29 | 33 | 33 | 32 | 41 | 49 | 42 | 14 | 104 | | ClaI | ATCGAT | 2 | 15 | 0 | 2 | 1 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 3 | | CspCI | CAANNNNNGTGG | 6 | 7 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 9 | | CviAII | CATG | 183 | 181 | 9 | 14 | 26 | 25 | 23 | 38 | 23 | 21 | 23 | 31 | 11 | 148 | | CviKI-1 | RGCY | 680 | 692 | 46 | 103 | 73 | 105 | 101 | 131 | 86 | 119 | 112 | 121 | 45 | 562 | | CviQI | GTAC | 83 | 113 | 3 | 19 | 3 | 11 | 3 | 15 | 7 | 14 | 6 | 11 | 3 | 168 | | DdeI <top> | CTNAG | 97 | 104 | 4 | 30 | 8 | 11 | 9 | 17 | 11 | 11 | 20 | 19 | 6 | 282 | | DpnI | GATC | 87 | 116 | 16 | 6 | 22 | 38 | 33 | 35 | 23 | 31 | 24 | 29 | 15 | 6 | | DpnII | GATC | 87 | 116 | 16 | 6 | 22 | 38 | 33 | 35 | 23 | 31 | 24 | 29 | 15 | 6 | | DraI | TTTAAA | 12 | 13 | 2 | 5 | 3 | 3 | 3 | 5 | 1 | 6 | 3 | 2 | 3 | 9 | | DraIII | CACNNNGTG | 10 | 10 | 1 | 1 | 0 | 1 | 1 | 2 | 0 | 3 | 1 | 1 | 0 | 16 | | DraIII-HF™ | CACNNNGTG | 10 | 10 | 1 | 1 | 0 | - | 1 | 2 | 0 | - | 1 | 1 | 0 | 16 | | DrdI | GACNNNNNNGTC | 6 | 3 | 2 | 1 | 2 | 3 | 3 | 5 | 2 | 2 | 4 | 4 | 2 | 11 | | EaeI <top> | YGGCCR | 70 | 39 | 2 | 3 | 6 | 8 | 10 | 10 | 5 | 15 | 4 | 8 | 3 | 2 | | EagI | CGGCCG | 19 | 2 | 0 | 0 | 1 | 2 | 2 | 4 | 1 | 2 | 2 | 2 | 0 | 0 | | EagI-HF™ | CGGCCG | 19 | 2 | 0 | 0 | 1 | - | 2 | 4 | 1 | - | 2 | 2 | 0 | 0 | | EarI | CTCTTC | 29 | 34 | 2 | 2 | 2 | 5 | 4 | 11 | 6 | 4 | 3 | 5 | 3 | 46 | | EciI | GGCGGA | 29 | 32 | 3 | 2 | 4 | 10 | 9 | 6 | 6 | 8 | 9 | 8 | 3 | 2 | | Eco53kI | GAGCTC | 16 | 2 | 1 | 1 | 0 | 1 | 1 | 2 | 1 | 2 | 0 | 1 | 1 | 0 | | EcoNI | CCTNNNNNAGG | 10 | 9 | 0 | 0 | 1 | 0 | 0 | 3 | 0 | 0 | 2 | 1 | 0 | 1 | | EcoO109I | RGGNCCY | 44 | 3 | 0 | 0 | 4 | 1 | 0 | 1 | 2 | 5 | 1 | 3 | 1 | 22 | | EcoP15I | CAGCAG | 50 | 72 | 3 | 4 | 7 | 4 | 4 | 7 | 10 | 6 | 6 | 5 | 3 | 36 | | EcoRI | GAATTC | 5 | 5 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | | EcoRI-HF™ | GAATTC | 5 | 5 | 1 | 1 | 1 | - | 1 | 1 | 1 | - | 1 | 1 | 1 | 0 | | EcoRV | GATATC | 9 | 21 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 3 | 0 | 0 | | EcoRV-HF™ | GATATC | 9 | 21 | 1 | 0 | 1 | - | 1 | 1 | 1 | - | 1 | 3 | 0 | 0 | | FatI <top> | CATG | 183 | 181 | 9 | 14 | 26 | 25 | 23 | 38 | 23 | 21 | 23 | 31 | 11 | 148 | | FauI | CCCGC | 147 | 90 | 5 | 10 | 10 | 10 | 10 | 14 | 17 | 11 | 28 | 22 | 5 | 24 | | Fnu4HI | GCNGC | 411 | 380 | 16 | 17 | 42 | 46 | 46 | 52 | 42 | 47 | 49 | 52 | 19 | 156 | | FokI | GGATG | 78 | 150 | 4 | 4 | 12 | 16 | 11 | 20 | 17 | 7 | 12 | 18 | 5 | 97 | | FseI | GGCCGGCC | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | | FspEI | CC | - | - | - | - | - | - | - | - | - | - | - | - | - | - | | FspI | TGCGCA | 17 | 15 | 2 | 1 | 4 | 2 | 2 | 3 | 2 | 2 | 1 | 2 | 2 | 7 | | HaeII <top> | RGCGCY | 76 | 48 | 4 | 6 | 11 | 5 | 5 | 6 | 9 | 3 | 7 | 12 | 3 | 26 | | HaeIII | GGCC | 216 | 149 | 12 | 15 | 22 | 21 | 24 | 31 | 23 | 36 | 34 | 36 | 11 | 68 | | HgaI | GACGC | 87 | 102 | 3 | 7 | 11 | 5 | 6 | 10 | 12 | 7 | 20 | 15 | 4 | 70 | | HhaI | GCGC | 375 | 215 | 19 | 26 | 31 | - | 28 | 36 | 39 | - | 41 | 46 | 17 | 103 | | HincII | GTYRAC | 25 | 35 | 2 | 1 | 2 | 3 | 3 | 9 | 7 | 4 | 7 | 6 | 1 | 61 | | HindIII | AAGCTT | 12 | 6 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 0 | 2 | 1 | 0 | | HindIII-HF™ | AAGCTT | 12 | 6 | 1 | 1 | 1 | - | 1 | 1 | 1 | - | 0 | 2 | 1 | 0 | | HinfI | GANTC | 72 | 148 | 6 | 26 | 10 | 21 | 15 | 31 | 9 | 11 | 16 | 20 | 6 | 218 | | HinP1I | GCGC | 375 | 215 | 19 | 26 | 31 | 31 | 28 | 36 | 39 | 27 | 41 | 46 | 17 | 103 | | HpaI | GTTAAC | 6 | 14 | 1 | 0 | 0 | 0 | 0 | 3 | 1 | 1 | 1 | 2 | 0 | 18 | | HpaII | CCGG | 171 | 328 | 12 | 18 | 26 | 24 | 25 | 32 | 25 | 24 | 50 | 35 | 13 | 58 | | HphI | GGTGA | 99 | 168 | 9 | 18 | 12 | 11 | 8 | 15 | 19 | 14 | 21 | 20 | 7 | 102 | | Hpy166II | GTNNAC | 116 | 125 | 10 | 10 | 8 | 14 | 13 | 29 | 20 | 13 | 27 | 24 | 5 | 199 | | Hpy188I | TCNGA | 80 | 170 | 10 | 31 | 15 | 24 | 20 | 24 | 19 | 17 | 19 | 28 | 10 | 153 | | Hpy188III | TCNNGA | 103 | 185 | 12 | 28 | 19 | 32 | 26 | 32 | 22 | 25 | 27 | 28 | 13 | 173 | | Hpy99I | CGWCG | 61 | 102 | 5 | 8 | 9 | 12 | 12 | 14 | 9 | 13 | 18 | 16 | 5 | 29 | | HpyAV | CCTTC | 84 | 106 | 7 | 14 | 10 | 16 | 12 | 24 | 14 | 11 | 16 | 20 | 6 | 110 | | HpyCH4III | ACNGT | 122 | 187 | 7 | 31 | 14 | 22 | 11 | 25 | 20 | 15 | 18 | 22 | 8 | 174 | | HpyCH4IV | ACGT | 83 | 143 | 13 | 22 | 10 | 15 | 11 | 21 | 10 | 19 | 23 | 22 | 5 | 170 | | HpyCH4V | TGCA | 207 | 273 | 10 | 18 | 21 | 32 | 28 | 39 | 28 | 30 | 26 | 27 | 13 | 116 | | KasI <top> | GGCGCC | 20 | 1 | 0 | 1 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 1 | 2 | | KpnI | GGTACC | 8 | 2 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 2 | 0 | 1 | 1 | 5 | | KpnI-HF™ | GGTACC | 8 | 2 | 1 | 1 | 0 | - | 1 | 0 | 0 | - | 0 | 1 | 1 | 5 | | LpnPI <top> | CCDG | - | - | - | - | - | - | - | - | - | - | - | - | - | - | | MboI <top> | GATC | 87 | 116 | 16 | 6 | 22 | 38 | 33 | 35 | 23 | 31 | 24 | 29 | 15 | 6 | | MboII | GAAGA | 113 | 130 | 10 | 10 | 11 | 18 | 13 | 38 | 15 | 14 | 14 | 18 | 8 | 140 | | MfeI | CAATTG | 4 | 8 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 2 | 1 | 1 | 0 | 8 | | MfeI-HF™ | CAATTG | 4 | 8 | 0 | 0 | 0 | - | 0 | 2 | 1 | - | 1 | 1 | 0 | 8 | | MluCI | AATT | 87 | 189 | 8 | 62 | 8 | 18 | 15 | 43 | 22 | 19 | 31 | 44 | 7 | 79 | | MluI | ACGCGT | 5 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 2 | 1 | 0 | 1 | | MlyI | GAGTC | 40 | 61 | 6 | 8 | 4 | 8 | 8 | 17 | 5 | 6 | 11 | 10 | 4 | 115 | | MmeI | TCCRAC | 25 | 18 | 3 | 3 | 4 | 5 | 3 | 8 | 3 | 5 | 4 | 4 | 2 | 33 | | MnlI | CCTC | 397 | 262 | 11 | 62 | 26 | 35 | 30 | 56 | 24 | 41 | 35 | 39 | 13 | 342 | | MscI | TGGCCA | 17 | 18 | 0 | 1 | 1 | 1 | 2 | 0 | 1 | 2 | 0 | 1 | 0 | 2 | | MseI | TTAA | 115 | 195 | 15 | 63 | 15 | 18 | 16 | 41 | 24 | 23 | 32 | 39 | 13 | 207 | | MslI | CAYNNNNRTG | 35 | 62 | 3 | 3 | 7 | 7 | 5 | 10 | 10 | 6 | 7 | 9 | 3 | 38 | | MspA1I | CMGCKG | 95 | 75 | 4 | 4 | 6 | 9 | 8 | 14 | 11 | 8 | 10 | 12 | 6 | 35 | | MspI | CCGG | 171 | 328 | 12 | 18 | 26 | 24 | 25 | 32 | 25 | 24 | 50 | 35 | 13 | 58 | | MspJI | CNNR | - | - | - | - | - | - | - | - | - | - | - | - | - | - | | MwoI | GCNNNNNNNGC | 391 | 347 | 13 | 19 | 34 | 33 | 38 | 33 | 30 | 42 | 41 | 43 | 13 | 170 | | NaeI <top> | GCCGGC | 13 | 1 | 0 | 1 | 4 | 3 | 3 | 3 | 0 | 2 | 5 | 5 | 0 | 0 | | NarI | GGCGCC | 20 | 1 | 0 | 1 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 1 | 2 | | Nb.BbvCI | CCTCAGC | 9 | 7 | 0 | 2 | 0 | - | 0 | 0 | 0 | - | 0 | 0 | 0 | 10 | | Nb.BsmI | GAATGC | 10 | 46 | 1 | 1 | 1 | - | 1 | 3 | 1 | - | 1 | 0 | 0 | 15 | | Nb.BsrDI | GCAATG | 14 | 44 | 2 | 3 | 2 | - | 3 | 7 | 4 | - | 4 | 4 | 2 | 18 | | Nb.BtsI | GCAGTG | 22 | 34 | 2 | 1 | 2 | - | 5 | 7 | 5 | - | 4 | 4 | 3 | 20 | | NciI | CCSGG | 97 | 114 | 4 | 4 | 10 | 9 | 10 | 10 | 13 | 9 | 27 | 15 | 7 | 9 | | NcoI | CCATGG | 20 | 4 | 1 | 0 | 0 | 2 | 4 | 1 | 1 | 3 | 0 | 1 | 0 | 1 | | NcoI-HF™ | CCATGG | 20 | 4 | 1 | 0 | 0 | - | 4 | 1 | 1 | - | 0 | 1 | 0 | 1 | | NdeI | CATATG | 2 | 7 | 0 | 3 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 7 | | NgoMIV | GCCGGC | 13 | 1 | 0 | 1 | 4 | 3 | 3 | 3 | 0 | 2 | 5 | 5 | 0 | 0 | | NheI | GCTAGC | 4 | 1 | 0 | 0 | 1 | - | 0 | 4 | 0 | - | 1 | 1 | 0 | 1 | | NheI-HF™ | GCTAGC | 4 | 1 | 0 | 0 | 1 | - | 0 | 4 | 0 | - | 1 | 1 | 0 | 1 | | NlaIII | CATG | 183 | 181 | 9 | 14 | 26 | 25 | 23 | 38 | 23 | 21 | 23 | 31 | 11 | 148 | | NlaIV | GGNNCC | 178 | 82 | 13 | 18 | 24 | 25 | 18 | 22 | 14 | 20 | 22 | 30 | 11 | 99 | | NmeAIII | GCCGAG | 17 | 8 | 1 | 0 | 3 | 3 | 4 | 2 | 3 | 2 | 2 | 4 | 1 | 14 | | NotI | GCGGCCGC | 7 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | | NotI-HF™ | GCGGCCGC | 7 | 0 | 0 | 0 | 0 | - | 1 | 1 | 1 | - | 1 | 1 | 0 | 0 | | NruI | TCGCGA | 5 | 5 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 3 | | NsiI | ATGCAT | 9 | 14 | 1 | 0 | 0 | 3 | 3 | 6 | 0 | 1 | 0 | 0 | 0 | 8 | | NspI | RCATGY | 41 | 32 | 1 | 6 | 4 | 7 | 6 | 9 | 3 | 5 | 5 | 5 | 3 | 24 | | Nt.AlwI | GGATC | 35 | 58 | 10 | 3 | 12 | - | 20 | 18 | 12 | - | 15 | 16 | 10 | 1 | | Nt.BbvCI | CCTCAGC | 9 | 7 | 0 | 2 | 0 | - | 0 | 0 | 0 | - | 0 | 0 | 0 | 10 | | Nt.BsmAI | GTCTC | 60 | 37 | 3 | 5 | 3 | - | 3 | 11 | 8 | - | 8 | 10 | 4 | 95 | | Nt.BspQI | GCTCTTC | 7 | 10 | 0 | 0 | 1 | - | 3 | 2 | 1 | - | 1 | 1 | 1 | 4 | | Nt.BstNBI | GAGTC | 40 | 61 | 6 | 8 | 4 | 8 | 8 | 17 | 5 | 6 | 11 | 10 | 4 | 115 | | Nt.CviPII | CCD | 4148 | 4641 | 261 | 570 | 457 | 595 | 511 | 806 | 570 | 609 | 716 | 729 | 251 | 3575 | | PacI <top> | TTAATTAA | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | | PaeR7I | CTCGAG | 6 | 1 | 1 | 0 | 0 | 1 | 2 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | | PciI | ACATGT | 9 | 2 | 1 | 3 | 1 | 2 | 1 | 3 | 1 | 2 | 1 | 1 | 1 | 6 | | PflFI | GACNNNGTC | 12 | 2 | 0 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | | PflMI | CCANNNNNTGG | 18 | 14 | 0 | 0 | 2 | 3 | 0 | 3 | 1 | 5 | 2 | 2 | 0 | 8 | | PhoI | GGCC | 216 | 149 | 12 | 15 | 22 | 21 | 24 | 31 | 23 | 36 | 34 | 36 | 11 | 68 | | PleI | GAGTC | 40 | 61 | 6 | 8 | 4 | 8 | 8 | 17 | 5 | 6 | 11 | 10 | 4 | 115 | | PmeI | GTTTAAAC | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 2 | | PmlI | CACGTG | 10 | 3 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 1 | | PpuMI | RGGWCCY | 23 | 3 | 0 | 0 | 2 | 1 | 0 | 1 | 2 | 1 | 0 | 0 | 0 | 12 | | PshAI | GACNNNNGTC | 2 | 7 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 2 | 0 | 6 | | PsiI | TTATAA | 4 | 12 | 1 | 2 | 0 | 2 | 2 | 2 | 1 | 1 | 1 | 1 | 0 | 5 | | PspGI | CCWGG | 136 | 71 | 5 | 7 | 6 | 19 | 14 | 15 | 14 | 19 | 19 | 14 | 5 | 2 | | PspOMI | GGGCCC | 12 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | | PspXI | VCTCGAGB | 3 | 1 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | | PstI | CTGCAG | 30 | 28 | 1 | 1 | 1 | 2 | 2 | 3 | 1 | 4 | 1 | 1 | 1 | 0 | | PstI-HF™ | CTGCAG | 30 | 28 | 1 | 1 | 1 | - | 2 | 3 | 1 | - | 1 | 1 | 1 | 0 | | PvuI | CGATCG | 7 | 3 | 2 | 1 | 1 | 1 | 2 | 3 | 2 | 1 | 1 | 2 | 2 | 0 | | PvuI-HF™ | CGATCG | 7 | 3 | 2 | 1 | 1 | - | 2 | 3 | 2 | - | 1 | 2 | 2 | 0 | | PvuII | CAGCTG | 24 | 15 | 1 | 3 | 1 | 5 | 3 | 3 | 3 | 3 | 3 | 4 | 2 | 3 | | PvuII-HF™ | CAGCTG | 24 | 15 | 1 | 3 | 1 | - | 3 | 3 | 3 | - | 3 | 4 | 2 | 3 | | RsaI <top> | GTAC | 83 | 113 | 3 | 19 | 3 | 11 | 3 | 15 | 7 | 14 | 6 | 11 | 3 | 168 | | RsrII | CGGWCCG | 2 | 5 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | | SacI <top> | GAGCTC | 16 | 2 | 1 | 1 | 0 | 12 | 1 | 2 | 1 | 2 | 0 | 1 | 1 | 0 | | SacI-HF™ | GAGCTC | 16 | 2 | 1 | 1 | 0 | - | 1 | 2 | 1 | - | 0 | 1 | 1 | 0 | | SacII | CCGCGG | 33 | 4 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 1 | 1 | 1 | 0 | 0 | | SalI | GTCGAC | 3 | 2 | 0 | 1 | 1 | 1 | 3 | 1 | 1 | 1 | 4 | 1 | 1 | 0 | | SalI-HF™ | GTCGAC | 3 | 2 | 0 | 1 | 1 | - | 3 | 1 | 1 | - | 4 | 1 | 1 | 0 | | SapI | GCTCTTC | 7 | 10 | 0 | 0 | 1 | 3 | 3 | 2 | 1 | 3 | 1 | 1 | 1 | 4 | | Sau3AI | GATC | 87 | 116 | 16 | 6 | 22 | 38 | 33 | 35 | 23 | 31 | 24 | 29 | 15 | 6 | | Sau96I | GGNCC | 164 | 74 | 6 | 4 | 15 | 7 | 8 | 14 | 20 | 21 | 26 | 24 | 6 | 79 | | SbfI | CCTGCAGG | 3 | 5 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 0 | | SbfI-HF™ | CCTGCAGG | 3 | 5 | 1 | 1 | 0 | - | 0 | 1 | 1 | - | 0 | 1 | 1 | 0 | | ScaI | AGTACT | 5 | 5 | 1 | 0 | 1 | 1 | 1 | 2 | 1 | 2 | 1 | 2 | 1 | 4 | | ScaI-HF™ | AGTACT | 5 | 5 | 1 | 0 | 1 | - | 1 | 2 | 1 | - | 1 | 2 | 1 | 4 | | ScrFI | CCNGG | 233 | 185 | 9 | 11 | 16 | 28 | 24 | 25 | 27 | 28 | 46 | 29 | 12 | 11 | | SexAI | ACCWGGT | 9 | 5 | 0 | 0 | 0 | 2 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | | SfaNI | GCATC | 85 | 169 | 5 | 7 | 22 | 20 | 19 | 18 | 20 | 17 | 23 | 19 | 8 | 96 | | SfcI | CTRYAG | 47 | 38 | 7 | 7 | 4 | 9 | 6 | 9 | 4 | 10 | 6 | 8 | 4 | 48 | | SfiI | GGCCNNNNNGGCC | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | | SfoI | GGCGCC | 20 | 1 | 0 | 1 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 4 | 1 | 2 | | SgrAI | CRCCGGYG | 6 | 6 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | | SmaI | CCCGGG | 12 | 3 | 0 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | | SmlI | CTYRAG | 29 | 17 | 5 | 4 | 6 | 7 | 8 | 8 | 5 | 10 | 8 | 9 | 4 | 75 | | SnaBI | TACGTA | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 13 | | SpeI | ACTAGT | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 2 | | SphI | GCATGC | 8 | 6 | 0 | 1 | 1 | 4 | 5 | 2 | 0 | 2 | 2 | 1 | 1 | 0 | | SphI-HF™ | GCATGC | 8 | 6 | 0 | 1 | 1 | - | 5 | 2 | 0 | - | 2 | 1 | 1 | 0 | | SspI | AATATT | 5 | 20 | 3 | 6 | 1 | 1 | 1 | 6 | 2 | 1 | 3 | 5 | 1 | 6 | | SspI-HF™ | AATATT | 5 | 20 | 3 | 6 | 1 | - | 1 | 6 | 2 | - | 3 | 5 | 1 | 6 | | StuI | AGGCCT | 11 | 6 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 1 | 1 | 0 | 1 | | StyD4I | CCNGG | 233 | 185 | 9 | 11 | 16 | 28 | 24 | 25 | 27 | 28 | 46 | 29 | 12 | 11 | | StyI | CCWWGG | 44 | 10 | 2 | 0 | 1 | 5 | 5 | 4 | 1 | 4 | 2 | 4 | 0 | 36 | | StyI-HF™ | CCWWGG | 44 | 10 | 2 | 0 | 1 | - | 5 | 4 | 1 | - | 2 | 4 | 0 | 36 | | SwaI | ATTTAAAT | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | | TaqαI <top> | TCGA | 50 | 121 | 5 | 12 | 7 | 17 | 17 | 32 | 16 | 15 | 22 | 17 | 4 | 111 | | TfiI | GAWTC | 32 | 87 | 0 | 18 | 6 | 13 | 7 | 14 | 4 | 5 | 5 | 10 | 2 | 103 | | TliI | CTCGAG | 6 | 1 | 1 | 0 | 0 | 1 | 2 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | | TseI | GCWGC | 179 | 199 | 9 | 10 | 21 | 22 | 23 | 27 | 25 | 20 | 27 | 29 | 12 | 116 | | Tsp45I | GTSAC | 73 | 81 | 6 | 9 | 9 | 8 | 6 | 9 | 7 | 5 | 12 | 13 | 4 | 108 | | Tsp509I | AATT | 87 | 189 | 8 | 62 | 8 | - | 15 | 43 | 22 | - | 31 | 33 | 7 | 79 | | TspMI | CCCGGG | 12 | 3 | 0 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | | TspRI | CASTG | 83 | 119 | 7 | 9 | 11 | 15 | 12 | 22 | 14 | 16 | 16 | 15 | 10 | 94 | | Tth111I | GACNNNGTC | 12 | 2 | 0 | 0 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 0 | 1 | | XbaI <top> | TCTAGA | 5 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 3 | | XcmI | CCANNNNNNNNNTGG | 14 | 12 | 0 | 0 | 0 | 1 | 0 | 1 | 3 | 0 | 3 | 4 | 0 | 8 | | XhoI | CTCGAG | 6 | 1 | 1 | 0 | 0 | 1 | 2 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | | XmaI | CCCGGG | 12 | 3 | 0 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | | XmnI | GAANNNNTTC | 5 | 24 | 0 | 2 | 2 | 3 | 4 | 3 | 1 | 3 | 7 | 2 | 1 | 12 | | ZraI <top> | GACGTC | 3 | 10 | 1 | 0 | 1 | 1 | 1 | 0 | 0 | 5 | 1 | 0 | 1 | 1 |
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